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  Home > Genomes > Superfamily assignments for Gossypium raimondii v221


Gossypium raimondii v221 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium; Gossypium raimondii

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 77267 total
50418 (65 %) with assignment
426 average length
44 % amino acid coverage
Domains: 72637 total
991 unique superfamilies
826 unique families
284 average length
73.3 average superfamily size
99 % formed by duplication
Domain combinations: 1050 domain pairs
4363 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
4137 3550 310 11 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
3617 3605 181 4 SCOP 56112 Protein kinase-like (PK-like)
1900 1430 207 2 SCOP 52058 L domain-like
1766 1231 71 1 SCOP 54928 RNA-binding domain, RBD
1648 1543 105 3 SCOP 57850 RING/U-box
1626 1299 138 10 SCOP 48371 ARM repeat
1250 1143 43 3 SCOP 46689 Homeodomain-like
1243 1212 56 8 SCOP 51735 NAD(P)-binding Rossmann-fold domains
1127 881 88 2 SCOP 48452 TPR-like
1024 953 73 1 SCOP 50978 WD40 repeat-like
967 965 22 8 SCOP 53474 alpha/beta-Hydrolases
861 748 36 17 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
769 617 147 0 SCOP 52047 RNI-like
717 594 49 4 SCOP 52833 Thioredoxin-like
655 634 7 0 SCOP 103473 MFS general substrate transporter
639 636 55 8 SCOP 51445 (Trans)glycosidases
607 558 44 1 SCOP 47473 EF-hand
599 599 58 0 SCOP 81383 F-box domain
586 584 48 8 SCOP 56784 HAD-like
576 425 55 4 SCOP 54236 Ubiquitin-like
553 146 78 0 SCOP 57889 Cysteine-rich domain
525 524 14 2 SCOP 51197 Clavaminate synthase-like
521 398 12 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
493 492 5 1 SCOP 48264 Cytochrome P450
490 342 69 5 SCOP 50249 Nucleic acid-binding proteins
487 476 15 5 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
481 390 66 1 SCOP 57903 FYVE/PHD zinc finger
475 461 48 4 SCOP 46785 "Winged helix" DNA-binding domain
466 448 50 1 SCOP 48403 Ankyrin repeat
459 241 26 4 SCOP 53067 Actin-like ATPase domain
459 459 8 0 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
455 385 15 1 SCOP 54171 DNA-binding domain
444 305 35 1 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
432 374 39 5 SCOP 51905 FAD/NAD(P)-binding domain
429 202 13 3 SCOP 49503 Cupredoxins
427 422 16 5 SCOP 53448 Nucleotide-diphospho-sugar transferases
412 412 31 9 SCOP 54001 Cysteine proteinases
404 404 12 1 SCOP 81606 PP2C-like
404 319 25 1 SCOP 101936 DNA-binding pseudobarrel domain
401 308 34 0 SCOP 57667 beta-beta-alpha zinc fingers
386 382 37 4 SCOP 53098 Ribonuclease H-like
385 312 21 2 SCOP 55961 Bet v1-like
381 178 39 0 SCOP 90229 CCCH zinc finger
354 214 15 1 SCOP 47954 Cyclin-like
341 341 19 0 SCOP 54277 CAD & PB1 domains
332 149 34 1 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
324 324 34 1 SCOP 46565 Chaperone J-domain
317 305 13 5 SCOP 53383 PLP-dependent transferases
296 290 10 2 SCOP 54495 UBC-like
294 294 12 4 SCOP 56300 Metallo-dependent phosphatases
292 290 9 3 SCOP 51126 Pectin lyase-like
289 289 45 3 SCOP 50729 PH domain-like
277 219 8 1 SCOP 118290 WRKY DNA-binding domain
272 270 25 3 SCOP 49899 Concanavalin A-like lectins/glucanases
268 268 4 0 SCOP 55455 SRF-like
267 158 32 1 SCOP 55021 ACT-like
267 266 4 1 SCOP 101941 NAC domain
266 266 4 0 SCOP 57959 Leucine zipper domain
252 146 20 1 SCOP 90123 ABC transporter transmembrane region
251 177 18 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
246 226 43 8 SCOP 54211 Ribosomal protein S5 domain 2-like
242 194 9 1 SCOP 50129 GroES-like
242 207 27 0 SCOP 81901 HCP-like
241 240 7 1 SCOP 103506 Mitochondrial carrier
236 232 36 0 SCOP 54695 POZ domain
235 183 30 0 SCOP 57756 Retrovirus zinc finger-like domains
234 221 33 3 SCOP 81296 E set domains
228 162 32 3 SCOP 49785 Galactose-binding domain-like
213 194 26 3 SCOP 52799 (Phosphotyrosine protein) phosphatases II
208 208 9 2 SCOP 47113 Histone-fold
202 197 6 1 SCOP 47699 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
200 200 14 4 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
199 148 22 0 SCOP 54631 CBS-domain pair
196 195 5 1 SCOP 48113 Heme-dependent peroxidases
195 153 16 0 SCOP 55008 HMA, heavy metal-associated domain
194 144 13 3 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
194 188 28 2 SCOP 50447 Translation proteins
193 166 34 0 SCOP 46934 UBA-like
193 191 17 1 SCOP 52087 CRAL/TRIO domain
192 192 21 3 SCOP 52402 Adenine nucleotide alpha hydrolases-like
187 174 13 4 SCOP 52096 ClpP/crotonase
186 186 28 1 SCOP 53300 vWA-like
182 182 9 3 SCOP 64356 SNARE-like
181 100 6 2 SCOP 53901 Thiolase-like
178 97 7 1 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
175 170 21 2 SCOP 82199 SET domain
175 174 25 1 SCOP 81665 Calcium ATPase, transmembrane domain M
174 67 12 2 SCOP 55753 Actin depolymerizing proteins
173 166 25 4 SCOP 52374 Nucleotidylyl transferase
170 163 18 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
170 143 17 1 SCOP 49599 TRAF domain-like
169 99 26 0 SCOP 90209 Ran binding protein zinc finger-like
169 169 12 0 SCOP 46938 CRAL/TRIO N-terminal domain
167 155 14 2 SCOP 56219 DNase I-like
162 157 21 1 SCOP 117281 Kelch motif
162 162 8 1 SCOP 48464 ENTH/VHS domain
161 161 9 1 SCOP 50630 Acid proteases
161 161 4 1 SCOP 52266 SGNH hydrolase
161 161 21 1 SCOP 81653 Calcium ATPase, transduction domain A
160 160 7 1 SCOP 56801 Acetyl-CoA synthetase-like
160 158 7 6 SCOP 51182 RmlC-like cupins
158 149 11 0 SCOP 58038 SNARE fusion complex
156 109 16 6 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
155 141 9 0 SCOP 51110 alpha-D-mannose-specific plant lectins
155 155 12 1 SCOP 47370 Bromodomain
154 102 11 1 SCOP 54534 FKBP-like
152 135 12 1 SCOP 52172 CheY-like
152 152 6 1 SCOP 101148 Plant invertase/pectin methylesterase inhibitor
147 147 8 3 SCOP 48576 Terpenoid synthases
146 146 11 1 SCOP 47616 GST C-terminal domain-like
141 138 29 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
133 133 5 1 SCOP 50182 Sm-like ribonucleoproteins
133 72 16 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
130 116 15 0 SCOP 50985 RCC1/BLIP-II
130 58 12 1 SCOP 63411 LuxS/MPP-like metallohydrolase
127 95 7 2 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
127 107 16 0 SCOP 57997 Tropomyosin
126 105 15 3 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
124 124 6 1 SCOP 47661 t-snare proteins
123 123 3 2 SCOP 50685 Barwin-like endoglucanases
123 123 3 0 SCOP 117856 AF0104/ALDC/Ptd012-like
123 92 21 0 SCOP 54768 dsRNA-binding domain-like
120 120 22 3 SCOP 81301 Nucleotidyltransferase
120 120 12 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
118 118 8 2 SCOP 48208 Six-hairpin glycosidases
118 100 18 0 SCOP 81324 Voltage-gated potassium channels
117 116 5 1 SCOP 51430 NAD(P)-linked oxidoreductase
117 117 11 1 SCOP 50891 Cyclophilin-like
115 111 10 1 SCOP 50104 Translation proteins SH3-like domain
115 115 8 3 SCOP 49764 HSP20-like chaperones
115 115 10 1 SCOP 54427 NTF2-like
113 109 13 1 SCOP 52743 Subtilisin-like
111 108 21 4 SCOP 56059 Glutathione synthetase ATP-binding domain-like
111 111 5 2 SCOP 53720 ALDH-like
110 110 17 0 SCOP 63748 Tudor/PWWP/MBT
109 96 8 2 SCOP 53271 PRTase-like
109 107 9 2 SCOP 53254 Phosphoglycerate mutase-like
109 109 16 4 SCOP 74650 Galactose mutarotase-like
107 107 7 2 SCOP 55811 Nudix
107 66 14 0 SCOP 54160 Chromo domain-like
105 105 15 4 SCOP 53187 Zn-dependent exopeptidases
105 105 9 1 SCOP 74788 Cullin repeat-like
103 57 13 1 SCOP 55785 PYP-like sensor domain (PAS domain)
102 97 10 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
101 101 23 3 SCOP 88697 PUA domain-like
101 97 20 3 SCOP 63380 Riboflavin synthase domain-like
99 99 3 1 SCOP 81338 Aquaporin-like
99 93 11 1 SCOP 47095 HMG-box
99 99 8 4 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
97 97 17 2 SCOP 52029 GroEL apical domain-like
97 96 17 0 SCOP 57863 ArfGap/RecO-like zinc finger
96 49 13 1 SCOP 56024 Phospholipase D/nuclease
95 95 13 1 SCOP 53850 Periplasmic binding protein-like II
95 85 12 1 SCOP 51230 Single hybrid motif
93 93 9 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
93 34 5 0 SCOP 47762 PAH2 domain
91 80 14 1 SCOP 51206 cAMP-binding domain-like
91 91 11 2 SCOP 56176 FAD-binding/transporter-associated domain-like
89 89 7 1 SCOP 51395 FMN-linked oxidoreductases
88 88 15 1 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
87 87 5 1 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
87 87 25 2 SCOP 55681 Class II aaRS and biotin synthetases
87 65 18 0 SCOP 52113 BRCT domain
87 30 8 1 SCOP 53738 Phosphoglucomutase, first 3 domains
86 68 14 2 SCOP 52317 Class I glutamine amidotransferase-like
86 86 16 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
86 84 12 0 SCOP 50965 Galactose oxidase, central domain
86 86 10 4 SCOP 54373 FAD-linked reductases, C-terminal domain
86 18 8 0 SCOP 81698 FF domain
85 85 7 1 SCOP 81631 PAP/OAS1 substrate-binding domain
85 85 5 0 SCOP 89009 GAT-like domain
84 77 12 2 SCOP 51695 PLC-like phosphodiesterases
83 82 7 5 SCOP 51569 Aldolase
83 83 8 1 SCOP 52490 Tubulin nucleotide-binding domain-like
83 79 11 1 SCOP 52777 CoA-dependent acyltransferases
83 83 9 3 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
82 82 8 7 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
81 81 8 2 SCOP 54518 Tubby C-terminal domain-like
81 57 13 1 SCOP 47592 SWIB/MDM2 domain
80 80 8 0 SCOP 144091 Rhomboid-like
80 80 8 0 SCOP 49354 PapD-like
79 78 13 1 SCOP 48592 GroEL equatorial domain-like
79 49 12 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
78 78 5 1 SCOP 55307 Tubulin C-terminal domain-like
77 59 16 0 SCOP 50156 PDZ domain-like
76 56 14 0 SCOP 51045 WW domain
74 74 5 3 SCOP 48150 DNA-glycosylase
74 74 12 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
74 70 8 0 SCOP 54849 GroEL-intermediate domain like
73 67 21 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
73 73 8 1 SCOP 52025 PA domain
73 73 1 1 SCOP 49590 PHL pollen allergen
72 72 5 3 SCOP 53613 Ribokinase-like
72 72 6 1 SCOP 103612 SBT domain
71 69 11 3 SCOP 51161 Trimeric LpxA-like enzymes
71 71 5 1 SCOP 103511 Chlorophyll a-b binding protein
71 35 7 0 SCOP 75471 YhbY-like
71 71 5 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
70 69 9 2 SCOP 53137 Translational machinery components
70 70 16 0 SCOP 81995 beta-sandwich domain of Sec23/24
70 70 10 1 SCOP 101690 PAZ domain
69 69 10 6 SCOP 51556 Metallo-dependent hydrolases
69 66 9 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
68 68 14 2 SCOP 56104 SAICAR synthase-like
68 68 12 1 SCOP 56399 ADP-ribosylation
67 67 11 4 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
67 67 6 1 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
66 66 4 1 SCOP 49363 Purple acid phosphatase, N-terminal domain
65 65 6 0 SCOP 57829 Zn-binding ribosomal proteins
65 62 4 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
65 65 6 1 SCOP 49870 Osmotin, thaumatin-like protein
64 64 12 1 SCOP 49879 SMAD/FHA domain
63 55 6 2 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
62 62 12 2 SCOP 109604 HD-domain/PDEase-like
62 62 10 1 SCOP 88723 PIN domain-like
61 60 9 2 SCOP 55315 L30e-like
61 61 11 1 SCOP 51011 Glycosyl hydrolase domain
60 60 4 1 SCOP 75304 Amidase signature (AS) enzymes
60 60 6 3 SCOP 100950 NagB/RpiA/CoA transferase-like
60 53 14 0 SCOP 49452 Starch-binding domain-like
59 56 8 3 SCOP 52821 Rhodanese/Cell cycle control phosphatase
59 48 5 2 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
59 59 12 0 SCOP 82919 Zn-finger domain of Sec23/24
58 58 12 2 SCOP 52218 Flavoproteins
58 58 4 1 SCOP 140990 FtsH protease domain-like
57 40 9 0 SCOP 82153 FAS1 domain
56 56 10 1 SCOP 55920 Creatinase/aminopeptidase
56 56 4 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
56 45 12 1 SCOP 50494 Trypsin-like serine proteases
56 56 12 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
56 56 5 0 SCOP 48350 GTPase activation domain, GAP
55 55 3 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
55 35 7 2 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
54 54 10 3 SCOP 56672 DNA/RNA polymerases
54 54 5 1 SCOP 144000 Oxysterol-binding protein-like
54 18 1 1 SCOP 55973 S-adenosylmethionine synthetase
54 54 10 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
54 54 2 1 SCOP 48445 14-3-3 protein
54 54 2 1 SCOP 141562 At5g01610-like
54 27 2 1 SCOP 54416 Amine oxidase N-terminal region
53 53 10 1 SCOP 47576 Calponin-homology domain, CH-domain
53 53 5 0 SCOP 102712 JAB1/MPN domain
53 28 9 1 SCOP 54980 EF-G C-terminal domain-like
53 53 6 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
52 29 4 2 SCOP 51726 UROD/MetE-like
51 37 11 1 SCOP 55781 GAF domain-like
51 51 4 2 SCOP 52922 TK C-terminal domain-like
51 51 5 0 SCOP 47769 SAM/Pointed domain
50 50 2 1 SCOP 56655 Carbohydrate phosphatase
50 50 3 0 SCOP 64268 PX domain
50 44 7 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
50 50 6 0 SCOP 53822 Periplasmic binding protein-like I
50 48 8 1 SCOP 75005 Arabinanase/levansucrase/invertase
50 50 8 1 SCOP 81811 Helical domain of Sec23/24
49 47 8 3 SCOP 55120 Pseudouridine synthase
49 32 5 0 SCOP 81333 F1F0 ATP synthase subunit C
49 17 7 0 SCOP 50199 Staphylococcal nuclease
49 46 10 1 SCOP 52440 PreATP-grasp domain
48 48 5 5 SCOP 51366 Ribulose-phoshate binding barrel
48 48 5 1 SCOP 50475 FMN-binding split barrel
47 47 6 1 SCOP 54292 2Fe-2S ferredoxin-like
47 47 4 1 SCOP 52768 Arginase/deacetylase
47 47 2 1 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
47 47 7 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
46 46 6 0 SCOP 50800 PK beta-barrel domain-like
46 46 11 0 SCOP 46774 ARID-like
45 45 2 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
45 45 7 2 SCOP 52151 FabD/lysophospholipase-like
45 45 9 0 SCOP 161111 Cation efflux protein transmembrane domain-like
45 44 13 0 SCOP 52200 Toll/Interleukin receptor TIR domain
45 41 7 1 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
45 45 4 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
45 37 7 0 SCOP 55666 Ribonuclease PH domain 2-like
44 44 4 1 SCOP 53649 Alkaline phosphatase-like
44 44 2 0 SCOP 51306 LexA/Signal peptidase
44 27 12 0 SCOP 69065 RNase III domain-like
44 25 4 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
44 23 3 1 SCOP 55945 TATA-box binding protein-like
44 44 9 0 SCOP 144232 HIT/MYND zinc finger-like
44 44 9 1 SCOP 56204 Hect, E3 ligase catalytic domain
44 44 5 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
43 36 8 2 SCOP 53927 Cytidine deaminase-like
43 43 13 0 SCOP 103657 BAR/IMD domain-like
43 43 4 1 SCOP 102405 MCP/YpsA-like
43 42 9 0 SCOP 68906 SAP domain
43 31 5 0 SCOP 109905 Surp module (SWAP domain)
42 42 7 0 SCOP 55257 RBP11-like subunits of RNA polymerase
42 42 7 2 SCOP 51604 Enolase C-terminal domain-like
42 42 3 0 SCOP 158639 ENT-like
41 34 11 2 SCOP 53633 Carbamate kinase-like
41 41 2 1 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
41 41 2 1 SCOP 55724 Mog1p/PsbP-like
41 36 7 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
41 41 3 0 SCOP 117892 Band 7/SPFH domain
40 40 9 2 SCOP 55931 Glutamine synthetase/guanido kinase
40 40 8 2 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
40 40 6 1 SCOP 54826 Enolase N-terminal domain-like
40 40 2 1 SCOP 63887 P-domain of calnexin/calreticulin
39 39 3 1 SCOP 55159 eIF1-like
39 39 3 0 SCOP 52935 PK C-terminal domain-like
39 33 5 1 SCOP 47862 Saposin
38 36 13 0 SCOP 82171 DPP6 N-terminal domain-like
38 38 10 0 SCOP 81923 Double Clp-N motif
38 38 7 1 SCOP 49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
37 37 9 1 SCOP 52949 Macro domain-like
37 37 3 0 SCOP 63829 Calcium-dependent phosphotriesterase
37 37 2 1 SCOP 143113 NAP-like
37 36 9 0 SCOP 57783 Zinc beta-ribbon
37 34 7 1 SCOP 118310 AN1-like Zinc finger
37 37 5 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
37 37 2 1 SCOP 81822 RuBisCo LSMT C-terminal, substrate-binding domain
36 36 2 0 SCOP 52091 SpoIIaa-like
36 36 10 4 SCOP 52467 DHS-like NAD/FAD-binding domain
36 36 8 1 SCOP 51246 Rudiment single hybrid motif
36 36 2 1 SCOP 47874 Annexin
35 35 9 2 SCOP 75217 alpha/beta knot
35 34 7 1 SCOP 48484 Lipoxigenase
35 35 5 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
35 35 5 1 SCOP 75632 Cullin homology domain
35 35 6 0 SCOP 161245 Zinc hairpin stack
34 33 4 1 SCOP 53784 Phosphofructokinase
34 34 3 2 SCOP 47240 Ferritin-like
34 34 2 1 SCOP 50324 Inorganic pyrophosphatase
34 34 10 1 SCOP 54862 4Fe-4S ferredoxins
34 34 5 0 SCOP 161219 CHY zinc finger-like
34 34 2 1 SCOP 53056 beta-carbonic anhydrase, cab
34 31 4 1 SCOP 117070 LEA14-like
33 32 7 1 SCOP 56317 Carbon-nitrogen hydrolase
33 33 7 1 SCOP 81340 Clc chloride channel
33 33 9 1 SCOP 48425 Sec7 domain
33 33 7 0 SCOP 63491 BAG domain
32 32 8 2 SCOP 102114 Radical SAM enzymes
32 32 6 1 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
32 32 3 1 SCOP 82704 AlbA-like
32 32 2 1 SCOP 55895 Ribonuclease Rh-like
31 31 3 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
31 31 2 1 SCOP 57798 Casein kinase II beta subunit
31 31 9 1 SCOP 47819 HRDC-like
31 25 7 1 SCOP 53955 Lysozyme-like
31 31 6 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
31 31 4 0 SCOP 144074 E2F-DP heterodimerization region
31 31 7 0 SCOP 110942 HSP90 C-terminal domain
31 24 8 0 SCOP 57933 TAZ domain
31 27 3 0 SCOP 140383 BSD domain-like
30 30 8 0 SCOP 47027 Acyl-CoA binding protein
30 30 6 0 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
30 30 2 1 SCOP 56327 LDH C-terminal domain-like
30 28 11 0 SCOP 55277 GYF domain
30 30 3 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
29 29 4 1 SCOP 56047 Ribosomal protein S8
29 29 3 1 SCOP 52161 Ribosomal protein L13
29 25 3 1 SCOP 56815 Sec1/munc18-like (SM) proteins
29 28 4 1 SCOP 49329 Cu,Zn superoxide dismutase-like
29 29 5 1 SCOP 48019 post-AAA+ oligomerization domain-like
29 29 4 1 SCOP 49998 Amine oxidase catalytic domain
28 28 4 1 SCOP 52080 Ribosomal proteins L15p and L18e
28 15 3 1 SCOP 69645 Arp2/3 complex subunits
28 28 8 1 SCOP 50022 ISP domain
28 28 5 0 SCOP 53092 Creatinase/prolidase N-terminal domain
28 28 8 0 SCOP 52075 Outer arm dynein light chain 1
28 28 10 1 SCOP 81837 BEACH domain
27 27 4 2 SCOP 53697 SIS domain
27 26 7 2 SCOP 54197 HIT-like
27 27 2 1 SCOP 55144 LigT-like
27 27 9 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
27 23 5 0 SCOP 54106 LysM domain
27 27 7 1 SCOP 55060 GHMP Kinase, C-terminal domain
27 27 4 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
27 27 4 1 SCOP 54585 Cdc48 domain 2-like
26 26 5 0 SCOP 47060 S15/NS1 RNA-binding domain
26 26 3 0 SCOP 46579 Prefoldin
26 22 5 1 SCOP 51338 Composite domain of metallo-dependent hydrolases
26 26 6 1 SCOP 49348 Clathrin adaptor appendage domain
26 26 6 0 SCOP 109715 DEK C-terminal domain
26 26 8 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
25 25 2 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
25 25 2 1 SCOP 103491 Preprotein translocase SecY subunit
25 20 6 1 SCOP 53590 Nucleoside hydrolase
25 15 2 1 SCOP 54909 Dimeric alpha+beta barrel
25 24 4 1 SCOP 50814 Lipocalins
25 25 2 1 SCOP 55103 FAD-linked oxidases, C-terminal domain
25 25 7 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
25 25 5 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
25 22 5 0 SCOP 143791 DUSP-like
25 13 3 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
24 24 3 2 SCOP 48557 L-aspartase-like
24 24 5 1 SCOP 48613 Heme oxygenase-like
24 24 5 2 SCOP 46626 Cytochrome c
24 24 12 1 SCOP 52954 Class II aaRS ABD-related
24 24 4 1 SCOP 101386 all-alpha NTP pyrophosphatases
24 18 8 0 SCOP 47781 RuvA domain 2-like
24 24 10 0 SCOP 48334 DNA repair protein MutS, domain III
24 22 3 0 SCOP 161065 ATP synthase D chain-like
24 24 4 1 SCOP 81382 Skp1 dimerisation domain-like
24 24 11 0 SCOP 159042 Plus3-like
23 23 3 1 SCOP 56808 Ribosomal protein L1
23 23 3 1 SCOP 52166 Ribosomal protein L4
23 23 5 0 SCOP 47336 ACP-like
23 16 3 2 SCOP 54506 Diaminopimelate epimerase-like
23 23 5 0 SCOP 141571 Pentapeptide repeat-like
23 23 3 0 SCOP 103256 Hypothetical protein TM0160
23 23 4 1 SCOP 54447 ssDNA-binding transcriptional regulator domain
23 22 4 1 SCOP 55797 PR-1-like
23 23 5 0 SCOP 55154 CYTH-like phosphatases
23 23 3 1 SCOP 53732 Aconitase iron-sulfur domain
23 23 9 1 SCOP 55186 ThrRS/AlaRS common domain
23 23 3 0 SCOP 47895 Transducin (alpha subunit), insertion domain
23 23 4 0 SCOP 160219 AMPKBI-like
22 21 4 1 SCOP 64005 Undecaprenyl diphosphate synthase
22 22 2 1 SCOP 54648 DLC
22 22 2 1 SCOP 55770 Profilin (actin-binding protein)
22 22 4 1 SCOP 52016 LeuD/IlvD-like
22 21 3 1 SCOP 54626 Chalcone isomerase
22 22 5 1 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
21 21 4 1 SCOP 50193 Ribosomal protein L14
21 21 5 0 SCOP 46946 S13-like H2TH domain
21 21 5 1 SCOP 53800 Chelatase
21 21 3 1 SCOP 50692 ADC-like
21 21 2 0 SCOP 54736 ClpS-like
21 16 3 0 SCOP 54403 Cystatin/monellin
21 21 2 1 SCOP 52210 Succinyl-CoA synthetase domains
21 11 3 1 SCOP 56053 Ribosomal protein L6
21 21 6 1 SCOP 81271 TGS-like
21 9 3 1 SCOP 50382 Agglutinin
20 20 7 0 SCOP 55174 Alpha-L RNA-binding motif
20 20 3 1 SCOP 48256 Citrate synthase
20 20 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
20 20 4 1 SCOP 88713 Glycoside hydrolase/deacetylase
20 19 2 1 SCOP 81558 Photosystem I subunits PsaA/PsaB
20 20 6 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
20 14 3 0 SCOP 55136 Probable bacterial effector-binding domain
20 20 3 1 SCOP 89124 Nop domain
20 19 5 0 SCOP 50405 Actin-crosslinking proteins
20 20 4 1 SCOP 48225 Seven-hairpin glycosidases
20 20 4 1 SCOP 88688 Families 57/38 glycoside transferase middle domain
20 20 3 0 SCOP 140111 Endosomal sorting complex assembly domain
20 20 8 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
20 20 5 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
19 19 3 1 SCOP 53790 Tetrapyrrole methylase
19 19 5 1 SCOP 52980 Restriction endonuclease-like
19 19 2 0 SCOP 82282 Homocysteine S-methyltransferase
19 13 5 1 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
19 19 4 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
19 19 5 0 SCOP 160443 SMR domain-like
19 19 3 0 SCOP 52129 Caspase-like
19 19 4 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
19 14 5 1 SCOP 158702 Sec63 N-terminal domain-like
19 19 2 0 SCOP 74924 Cap-Gly domain
19 19 6 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
19 19 4 1 SCOP 63570 PABC (PABP) domain
19 19 4 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
19 19 10 0 SCOP 75553 Smc hinge domain
19 19 2 1 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
18 18 1 0 SCOP 52042 Ribosomal protein L32e
18 18 3 1 SCOP 56322 ADC synthase
18 18 1 2 SCOP 52972 ITPase-like
18 18 1 1 SCOP 161077 Photosystem II antenna protein-like
18 18 2 1 SCOP 51069 Carbonic anhydrase
18 18 2 1 SCOP 102462 Peptidyl-tRNA hydrolase II
18 11 4 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
18 9 3 1 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
18 18 6 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
18 18 3 1 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
18 18 3 0 SCOP 57277 Granulin repeat
17 17 2 1 SCOP 54999 Ribosomal protein S10
17 17 4 2 SCOP 54686 Ribosomal protein L16p/L10e
17 17 6 1 SCOP 53597 Dihydrofolate reductase-like
17 17 2 1 SCOP 75620 Release factor
17 17 5 1 SCOP 52313 Ribosomal protein S2
17 11 4 1 SCOP 55298 YjgF-like
17 17 2 0 SCOP 48140 Ribosomal protein L19 (L19e)
17 17 3 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
17 17 2 1 SCOP 111352 Ammonium transporter
17 17 4 1 SCOP 64167 SurE-like
17 17 5 1 SCOP 103025 Folate-binding domain
17 17 1 1 SCOP 102198 Putative cyclase
17 17 2 1 SCOP 74784 Translin
17 17 2 1 SCOP 48537 Phospholipase C/P1 nuclease
17 17 2 0 SCOP 90257 Myosin rod fragments
17 17 5 0 SCOP 57196 EGF/Laminin
17 17 3 0 SCOP 54368 Glutamine synthetase, N-terminal domain
17 17 2 0 SCOP 57095 Scorpion toxin-like
16 16 3 1 SCOP 47973 Ribosomal protein S7
16 16 2 2 SCOP 51316 Mss4-like
16 14 3 0 SCOP 55129 Ribosomal protein L30p/L7e
16 16 6 0 SCOP 54897 Protease propeptides/inhibitors
16 16 2 1 SCOP 53795 PEP carboxykinase-like
16 16 4 1 SCOP 48600 Chorismate mutase II
16 16 3 1 SCOP 54984 eEF-1beta-like
16 16 2 1 SCOP 68923 PEP carboxykinase N-terminal domain
16 16 2 0 SCOP 54529 Mitochondrial glycoprotein MAM33-like
16 16 2 0 SCOP 54556 Chitinase insertion domain
16 16 5 0 SCOP 101238 XPC-binding domain
15 15 4 0 SCOP 54843 Ribosomal protein L22
15 15 2 1 SCOP 51730 FAD-linked oxidoreductase
15 15 3 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
15 11 7 1 SCOP 50370 Ricin B-like lectins
15 15 3 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
15 15 4 0 SCOP 47090 PGBD-like
15 8 3 0 SCOP 55394 Bactericidal permeability-increasing protein, BPI
15 15 3 0 SCOP 48340 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
15 15 3 0 SCOP 47050 VHP, Villin headpiece domain
15 15 2 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
15 15 4 0 SCOP 46942 Elongation factor TFIIS domain 2
15 15 7 0 SCOP 143503 PUG domain-like
15 15 2 1 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
15 15 5 0 SCOP 64586 C-terminal domain of ProRS
15 15 1 1 SCOP 116768 DNA-binding domain of EIN3-like
14 13 3 1 SCOP 55194 Ribosome recycling factor, RRF
14 14 5 2 SCOP 55821 YrdC/RibB
14 14 3 1 SCOP 55205 EPT/RTPC-like
14 13 2 0 SCOP 63393 RNA polymerase subunits
14 14 3 2 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
14 14 2 0 SCOP 47694 Cytochrome c oxidase subunit h
14 14 1 1 SCOP 49777 PEBP-like
14 14 2 1 SCOP 81483 Bacterial photosystem II reaction centre, L and M subunits
14 14 6 0 SCOP 69322 Tricorn protease domain 2
14 6 5 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
14 14 2 0 SCOP 50911 Mannose 6-phosphate receptor domain
14 14 2 0 SCOP 50916 Rap30/74 interaction domains
14 14 1 0 SCOP 140427 VPS28 C-terminal domain-like
14 14 4 0 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
13 13 2 0 SCOP 54570 Ribosomal protein S19
13 13 4 0 SCOP 110324 Ribosomal L27 protein-like
13 13 4 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
13 13 2 1 SCOP 103263 Chorismate synthase, AroC
13 13 3 1 SCOP 50715 Ribosomal protein L25-like
13 13 6 2 SCOP 51419 PLP-binding barrel
13 13 1 0 SCOP 53639 AraD/HMP-PK domain-like
13 12 2 1 SCOP 118203 Vacuolar ATP synthase subunit C
13 13 1 1 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
13 13 2 1 SCOP 56529 FAH
13 13 1 0 SCOP 55287 RPB5-like RNA polymerase subunit
13 13 7 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
13 13 4 0 SCOP 101898 NHL repeat
13 13 4 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
13 13 4 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
13 13 4 0 SCOP 82708 R3H domain
13 13 2 0 SCOP 57845 B-box zinc-binding domain
13 13 1 1 SCOP 118359 Expressed protein At2g23090/F21P24.15
13 13 4 1 SCOP 101233 PWI domain
13 13 2 0 SCOP 57016 Plant lectins/antimicrobial peptides
12 12 2 1 SCOP 55282 RL5-like
12 12 3 1 SCOP 53748 Phosphoglycerate kinase
12 12 4 1 SCOP 82649 SufE/NifU
12 12 3 1 SCOP 55068 Peptide methionine sulfoxide reductase
12 12 1 0 SCOP 103456 Preprotein translocase SecE subunit
12 12 2 1 SCOP 56019 The spindle assembly checkpoint protein mad2
12 12 5 0 SCOP 141734 HisI-like
12 12 4 0 SCOP 57802 Rubredoxin-like
12 7 3 0 SCOP 50346 PRC-barrel domain
12 12 4 1 SCOP 111321 AF1104-like
12 12 4 1 SCOP 56003 Molybdenum cofactor-binding domain
12 12 5 0 SCOP 46589 tRNA-binding arm
12 12 2 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
12 12 1 0 SCOP 49265 Fibronectin type III
12 7 3 0 SCOP 53681 Aspartate/glutamate racemase
12 12 2 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
12 12 4 1 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
12 12 3 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
12 12 4 1 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
12 12 2 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
12 9 4 0 SCOP 55550 SH2 domain
12 12 2 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
12 12 1 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
12 12 1 1 SCOP 101152 Mob1/phocein
12 12 1 0 SCOP 116846 MIT domain
12 12 2 0 SCOP 160527 V-type ATPase subunit E-like
12 12 2 1 SCOP 50989 Clathrin heavy-chain terminal domain
12 12 3 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
12 12 1 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
11 11 2 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
11 11 3 1 SCOP 142695 RibA-like
11 11 3 0 SCOP 46561 Ribosomal protein L29 (L29p)
11 11 2 0 SCOP 144122 Tim10-like
11 11 2 0 SCOP 47072 Cysteine alpha-hairpin motif
11 11 1 0 SCOP 103446 PetG subunit of the cytochrome b6f complex
11 11 1 0 SCOP 50090 Electron transport accessory proteins
11 11 3 1 SCOP 101112 Oxygen-evolving enhancer protein 3,
11 11 6 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
11 11 1 0 SCOP 50939 Sialidases
11 11 2 0 SCOP 160374 RplX-like
11 8 4 1 SCOP 55979 DNA clamp
11 10 5 1 SCOP 51971 Nucleotide-binding domain
11 11 5 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
11 11 3 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
11 11 3 1 SCOP 47741 CO dehydrogenase ISP C-domain like
11 11 3 1 SCOP 69000 FAD-dependent thiol oxidase
11 11 1 0 SCOP 81531 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
11 11 2 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
11 11 3 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
10 10 2 0 SCOP 160369 Ribosomal protein L10-like
10 10 4 1 SCOP 53328 Formyltransferase
10 10 4 1 SCOP 48439 Protein prenylyltransferase
10 10 2 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
10 7 3 2 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
10 10 3 0 SCOP 103642 Sec-C motif
10 10 2 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
10 10 2 1 SCOP 50993 Peptidase/esterase 'gauge' domain
10 10 3 0 SCOP 143456 VC0467-like
10 10 2 1 SCOP 55826 YbaK/ProRS associated domain
10 10 1 1 SCOP 142535 AF0625-like
10 10 2 0 SCOP 48619 Phospholipase A2, PLA2
10 10 4 0 SCOP 56973 Aerolisin/ETX pore-forming domain
10 10 2 0 SCOP 47933 ERP29 C domain-like
10 10 6 0 SCOP 55271 DNA repair protein MutS, domain I
10 10 2 0 SCOP 158573 GINS helical bundle-like
10 10 1 0 SCOP 110004 Glycolipid transfer protein, GLTP
10 10 5 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
10 10 3 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
10 10 6 0 SCOP 140996 Hermes dimerisation domain
10 10 3 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
9 9 2 1 SCOP 51351 Triosephosphate isomerase (TIM)
9 9 3 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
9 9 1 0 SCOP 52499 Isochorismatase-like hydrolases
9 9 2 0 SCOP 50044 SH3-domain
9 9 3 0 SCOP 58113 Apolipoprotein A-I
9 9 1 2 SCOP 55909 Pentein
9 9 2 0 SCOP 55331 Tautomerase/MIF
9 9 2 1 SCOP 56349 DNA breaking-rejoining enzymes
9 9 4 1 SCOP 52335 Methylglyoxal synthase-like
9 9 1 0 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
9 9 2 0 SCOP 160104 Acetoacetate decarboxylase-like
9 9 6 1 SCOP 46548 alpha-helical ferredoxin
9 9 2 0 SCOP 54654 CI-2 family of serine protease inhibitors
9 9 2 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
9 9 4 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
9 9 4 0 SCOP 50621 Alanine racemase C-terminal domain-like
9 4 4 1 SCOP 51101 Mannose-binding lectins
9 9 1 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
9 9 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
9 9 2 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
9 8 3 1 SCOP 81886 Helical scaffold and wing domains of SecA
9 9 2 0 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
8 8 2 0 SCOP 53167 Purine and uridine phosphorylases
8 8 2 1 SCOP 74731 Ribosomal protein L20
8 8 2 1 SCOP 56276 S-adenosylmethionine decarboxylase
8 8 1 0 SCOP 141678 MAL13P1.257-like
8 8 1 0 SCOP 159468 AtpF-like
8 8 2 0 SCOP 55248 PCD-like
8 8 1 0 SCOP 103486 V-type ATP synthase subunit C
8 8 3 1 SCOP 81342 Transmembrane di-heme cytochromes
8 8 1 1 SCOP 46458 Globin-like
8 8 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
8 8 3 0 SCOP 47413 lambda repressor-like DNA-binding domains
8 7 3 1 SCOP 53218 Molybdenum cofactor biosynthesis proteins
8 8 1 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
8 8 1 0 SCOP 64076 MTH938-like
8 8 2 1 SCOP 89562 RraA-like
8 5 2 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
8 8 3 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
8 5 3 0 SCOP 89372 Fucose-specific lectin
8 8 1 1 SCOP 142877 EndoU-like
8 8 1 0 SCOP 158745 LanC-like
8 8 1 1 SCOP 48056 Di-copper centre-containing domain
8 8 1 1 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
8 8 2 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
8 8 2 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
8 8 2 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
8 8 2 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
8 8 2 0 SCOP 54752 RecA protein, C-terminal domain
8 8 2 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
8 8 2 1 SCOP 109993 VPS9 domain
8 8 1 0 SCOP 50386 STI-like
8 8 2 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
8 8 1 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
8 8 3 1 SCOP 81767 Pre-protein crosslinking domain of SecA
8 8 3 0 SCOP 101224 HAND domain of the nucleosome remodeling ATPase ISWI
7 7 2 0 SCOP 46911 Ribosomal protein S18
7 7 1 1 SCOP 56420 Peptide deformylase
7 7 1 1 SCOP 69765 IpsF-like
7 7 2 0 SCOP 89360 HesB-like domain
7 7 1 1 SCOP 56770 HydA/Nqo6-like
7 7 3 0 SCOP 82657 BolA-like
7 7 1 1 SCOP 56796 Dehydroquinate synthase-like
7 7 3 0 SCOP 54995 Ribosomal protein S6
7 7 2 0 SCOP 54575 Ribosomal protein L31e
7 7 1 1 SCOP 102886 Coproporphyrinogen III oxidase
7 7 2 1 SCOP 56634 Heme-dependent catalase-like
7 7 2 0 SCOP 140718 Mediator hinge subcomplex-like
7 7 2 1 SCOP 55418 eIF4e-like
7 7 1 1 SCOP 57662 Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
7 7 4 1 SCOP 161045 Cytochrome b559 subunits
7 7 2 0 SCOP 158615 RbcX-like
7 7 3 0 SCOP 89550 PHP domain-like
7 7 2 1 SCOP 56762 HydB/Nqo4-like
7 7 2 1 SCOP 51391 Thiamin phosphate synthase
7 6 4 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
7 7 1 0 SCOP 142338 CofD-like
7 7 1 0 SCOP 46950 Double-stranded DNA-binding domain
7 7 2 0 SCOP 160350 Rnp2-like
7 7 3 0 SCOP 81336 F1F0 ATP synthase subunit A
7 7 1 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
7 7 2 0 SCOP 75704 Mitotic arrest deficient-like 1, Mad1
7 7 1 0 SCOP 143548 Serine metabolism enzymes domain
7 7 1 1 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
7 7 2 1 SCOP 141493 Allene oxide cyclase-like
7 7 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
7 7 2 0 SCOP 103107 Hypothetical protein c14orf129, hspc210
7 6 3 1 SCOP 51649 RuBisCo, C-terminal domain
7 7 2 0 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
7 7 3 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
7 7 2 0 SCOP 47031 Second domain of FERM
7 7 2 0 SCOP 140612 EB1 dimerisation domain-like
7 7 2 0 SCOP 101821 Aminopeptidase/glucanase lid domain
6 6 3 0 SCOP 48013 NusB-like
6 6 3 0 SCOP 57840 Ribosomal protein L36
6 6 3 1 SCOP 64263 Prokaryotic ribosomal protein L17
6 6 1 1 SCOP 51658 Xylose isomerase-like
6 6 3 0 SCOP 143800 L28p-like
6 6 1 1 SCOP 82549 DAK1/DegV-like
6 6 2 0 SCOP 54565 Ribosomal protein S16
6 6 2 0 SCOP 101908 Putative isomerase YbhE
6 6 1 1 SCOP 52121 Lumazine synthase
6 6 2 0 SCOP 144217 CSL zinc finger
6 3 1 0 SCOP 55469 FMN-dependent nitroreductase-like
6 6 1 0 SCOP 48662 Ribosomal protein L39e
6 6 3 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
6 6 2 1 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
6 6 1 1 SCOP 55239 RuBisCO, small subunit
6 3 2 0 SCOP 49478 Cna protein B-type domain
6 6 2 0 SCOP 89095 GatB/YqeY motif
6 6 1 0 SCOP 49472 Transthyretin (synonym: prealbumin)
6 6 1 1 SCOP 158694 UraD-Like
6 6 1 0 SCOP 56821 Prismane protein-like
6 6 1 1 SCOP 101473 DhaL-like
6 6 2 0 SCOP 142764 YgbK-like
6 6 3 0 SCOP 158832 Tex N-terminal region-like
6 6 5 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
6 6 1 1 SCOP 82114 Riboflavin kinase-like
6 6 5 1 SCOP 142921 WGR domain-like
6 6 3 1 SCOP 56719 Type II DNA topoisomerase
6 6 2 0 SCOP 55658 L9 N-domain-like
6 6 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
6 6 3 0 SCOP 141673 MOSC N-terminal domain-like
6 6 2 0 SCOP 142984 Nqo1 middle domain-like
6 6 1 1 SCOP 110019 ERO1-like
6 6 2 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
6 6 3 0 SCOP 81891 Poly A polymerase C-terminal region-like
6 6 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
6 6 2 0 SCOP 63418 MurE/MurF N-terminal domain
6 6 2 0 SCOP 140490 Nqo1C-terminal domain-like
6 6 4 1 SCOP 47446 Signal peptide-binding domain
6 6 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
6 6 1 1 SCOP 89817 Mago nashi protein
6 6 1 1 SCOP 143875 ERH-like
6 6 2 1 SCOP 142019 Nqo1 FMN-binding domain-like
6 6 2 0 SCOP 47040 Kix domain of CBP (creb binding protein)
6 6 2 1 SCOP 89942 eEF1-gamma domain
6 6 5 1 SCOP 49441 Cytochrome f, large domain
6 6 2 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
6 6 1 1 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
6 6 4 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
6 6 2 0 SCOP 47055 TAF(II)230 TBP-binding fragment
6 6 5 1 SCOP 47587 Domain of poly(ADP-ribose) polymerase
5 5 2 0 SCOP 143034 L35p-like
5 5 1 0 SCOP 141091 L21p-like
5 5 2 0 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
5 5 1 0 SCOP 81514 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
5 5 1 0 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
5 5 2 0 SCOP 69618 HemD-like
5 5 2 0 SCOP 143243 Nqo5-like
5 5 1 1 SCOP 51998 PFL-like glycyl radical enzymes
5 3 2 0 SCOP 46955 Putative DNA-binding domain
5 5 2 0 SCOP 101744 Rof/RNase P subunit-like
5 5 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
5 5 1 0 SCOP 54690 Molybdopterin synthase subunit MoaE
5 5 2 1 SCOP 54913 GlnB-like
5 5 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
5 5 3 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
5 5 2 0 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
5 5 2 1 SCOP 110069 ApaG-like
5 5 1 0 SCOP 48695 Multiheme cytochromes
5 5 1 0 SCOP 143437 THUMP domain-like
5 5 1 1 SCOP 69695 SRP19
5 5 2 0 SCOP 143865 CorA soluble domain-like
5 5 1 0 SCOP 141255 YccV-like
5 5 2 1 SCOP 102645 CoaB-like
5 5 1 0 SCOP 118116 DNA mismatch repair protein MutL
5 5 3 0 SCOP 49464 Carboxypeptidase regulatory domain-like
5 5 1 0 SCOP 81853 Family 10 polysaccharide lyase
5 5 2 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
5 5 1 1 SCOP 110111 Ctag/Cox11
5 5 2 0 SCOP 81585 PsbU/PolX domain-like
5 5 2 0 SCOP 69075 Glutamyl tRNA-reductase dimerization domain
5 5 1 1 SCOP 55637 Cell cycle regulatory proteins
5 5 1 0 SCOP 47794 Rad51 N-terminal domain-like
5 5 1 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
5 5 2 0 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
5 5 2 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
5 5 1 1 SCOP 82109 MIR domain
5 5 2 0 SCOP 47938 Functional domain of the splicing factor Prp18
5 5 1 0 SCOP 47672 Transferrin receptor-like dimerisation domain
5 5 3 1 SCOP 54966 RuBisCO, large subunit, small (N-terminal) domain
5 5 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
5 5 2 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
5 5 2 0 SCOP 158230 PRP4-like
4 4 1 0 SCOP 56731 DNA primase core
4 4 1 1 SCOP 52141 Uracil-DNA glycosylase-like
4 2 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
4 4 1 1 SCOP 54285 MoaD/ThiS
4 4 1 1 SCOP 69500 DTD-like
4 4 1 0 SCOP 103464 Oligosaccharyltransferase subunit ost4p
4 4 1 0 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
4 4 1 0 SCOP 144210 Nop10-like SnoRNP
4 4 2 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
4 4 2 1 SCOP 101960 Stabilizer of iron transporter SufD
4 4 2 0 SCOP 81540 Subunit VIII of photosystem I reaction centre, PsaI
4 4 2 0 SCOP 81544 Subunit IX of photosystem I reaction centre, PsaJ
4 4 1 0 SCOP 161025 Photosystem II 10 kDa phosphoprotein PsbH
4 4 1 0 SCOP 55718 SCP-like
4 4 3 1 SCOP 143990 YbiA-like
4 4 2 1 SCOP 51278 Urease, beta-subunit
4 4 2 0 SCOP 158997 Trm112p-like
4 4 2 0 SCOP 109910 YgfY-like
4 4 2 0 SCOP 69786 YggU-like
4 4 2 1 SCOP 56726 DNA topoisomerase IV, alpha subunit
4 4 1 0 SCOP 160631 SMI1/KNR4-like
4 4 1 0 SCOP 116820 Rps17e-like
4 4 2 0 SCOP 69318 Integrin alpha N-terminal domain
4 4 3 0 SCOP 63825 YWTD domain
4 4 2 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
4 3 2 1 SCOP 56042 PurM C-terminal domain-like
4 3 2 1 SCOP 55326 PurM N-terminal domain-like
4 4 2 0 SCOP 117289 Nucleoporin domain
4 4 2 0 SCOP 102735 Trigger factor ribosome-binding domain
4 4 2 0 SCOP 55904 Ornithine decarboxylase C-terminal domain
4 4 3 0 SCOP 110221 AbfB domain
4 4 3 0 SCOP 117839 WWE domain
4 4 1 0 SCOP 48097 Regulator of G-protein signaling, RGS
4 4 3 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
4 4 1 1 SCOP 140102 ISY1 domain-like
4 4 2 1 SCOP 109920 Hypothetical protein At3g22680
4 4 1 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
4 4 1 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
4 4 1 0 SCOP 55653 Ribosomal protein L9 C-domain
4 4 2 0 SCOP 81502 ISP transmembrane anchor
4 4 3 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
4 4 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
3 3 1 0 SCOP 82607 YbaB-like
3 3 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
3 3 2 0 SCOP 46992 Ribosomal protein S20
3 3 2 1 SCOP 51713 tRNA-guanine transglycosylase
3 3 1 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
3 3 1 0 SCOP 81508 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
3 3 1 0 SCOP 140959 Indolic compounds 2,3-dioxygenase-like
3 3 1 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
3 3 2 1 SCOP 64153 YjeF N-terminal domain-like
3 3 1 1 SCOP 46924 RNA polymerase subunit RPB10
3 3 1 1 SCOP 63562 RPB6/omega subunit-like
3 3 1 1 SCOP 64234 Photosystem I subunit PsaD
3 3 1 0 SCOP 161029 Photosystem II reaction center protein T, PsbT
3 3 1 1 SCOP 51717 Dihydropteroate synthetase-like
3 3 2 0 SCOP 53807 "Helical backbone" metal receptor
3 3 1 0 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
3 3 1 0 SCOP 161033 Photosystem II reaction center protein M, PsbM
3 3 1 0 SCOP 103441 PetM subunit of the cytochrome b6f complex
3 3 1 1 SCOP 54111 Urease, gamma-subunit
3 3 1 0 SCOP 143081 BB1717-like
3 3 1 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
3 3 1 0 SCOP 54975 Acylphosphatase/BLUF domain-like
3 3 1 0 SCOP 102588 LmbE-like
3 3 1 1 SCOP 110581 Indigoidine synthase A-like
3 3 1 1 SCOP 51219 TRAP-like
3 3 2 1 SCOP 50486 FMT C-terminal domain-like
3 3 1 0 SCOP 141130 Acetamidase/Formamidase-like
3 3 1 1 SCOP 56925 OMPA-like
3 3 3 1 SCOP 100939 SPOC domain-like
3 3 1 1 SCOP 56574 Serpins
3 3 2 0 SCOP 63867 MoeA C-terminal domain-like
3 3 2 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
3 3 1 0 SCOP 102110 (2r)-phospho-3-sulfolactate synthase ComA
3 3 1 0 SCOP 55234 Cyanase C-terminal domain
3 3 1 0 SCOP 56436 C-type lectin-like
3 3 2 0 SCOP 56037 PheT/TilS domain
3 3 2 1 SCOP 56371 Ribosome inactivating proteins (RIP)
3 3 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
3 3 1 0 SCOP 51984 MurCD N-terminal domain
3 3 2 1 SCOP 143975 IlvD/EDD N-terminal domain-like
3 3 2 0 SCOP 57184 Growth factor receptor domain
3 3 1 0 SCOP 116742 eIF2alpha middle domain-like
3 3 1 0 SCOP 54452 MHC antigen-recognition domain
3 3 1 1 SCOP 69012 alpha-ketoacid dehydrogenase kinase, N-terminal domain
3 3 1 0 SCOP 140106 Calcyclin-binding protein-like
3 3 2 0 SCOP 57774 Microbial and mitochondrial ADK, insert "zinc finger" domain
3 3 1 1 SCOP 110993 eIF-2-alpha, C-terminal domain
3 3 3 0 SCOP 103243 KA1-like
3 3 2 1 SCOP 47212 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
3 3 1 1 SCOP 88802 Pre-PUA domain
3 3 1 0 SCOP 49758 Calpain large subunit, middle domain (domain III)
3 3 1 1 SCOP 160897 Taf5 N-terminal domain-like
3 3 2 0 SCOP 53150 DNA repair protein MutS, domain II
2 2 2 0 SCOP 161098 MetI-like
2 2 2 1 SCOP 81452 Cytochrome c oxidase subunit III-like
2 2 1 0 SCOP 117991 YbeD/HP0495-like
2 2 1 0 SCOP 81321 Family A G protein-coupled receptor-like
2 2 1 0 SCOP 142897 TFB5-like
2 2 1 0 SCOP 81411 Mitochondrial cytochrome c oxidase subunit VIa
2 2 1 0 SCOP 89895 FYSH domain
2 2 1 0 SCOP 143870 PF0523-like
2 2 1 0 SCOP 48690 Epsilon subunit of mitochondrial F1F0-ATP synthase
2 2 1 1 SCOP 81442 Cytochrome c oxidase subunit I-like
2 2 1 1 SCOP 81536 Subunit III of photosystem I reaction centre, PsaF
2 2 1 1 SCOP 81568 Photosystem I reaction center subunit XI, PsaL
2 2 2 0 SCOP 161017 Photosystem II reaction center protein L, PsbL
2 2 1 0 SCOP 161084 MAPEG domain-like
2 2 1 0 SCOP 111038 YjbQ-like
2 2 2 0 SCOP 56601 beta-lactamase/transpeptidase-like
2 2 1 0 SCOP 103436 PetL subunit of the cytochrome b6f complex
2 2 2 0 SCOP 82771 GIY-YIG endonuclease
2 2 1 0 SCOP 159501 EreA/ChaN-like
2 2 1 1 SCOP 53213 LigB-like
2 2 1 1 SCOP 160909 ATP12-like
2 2 1 0 SCOP 158710 PSPTO4464-like
2 2 1 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
2 2 1 0 SCOP 144206 NOB1 zinc finger-like
2 2 1 0 SCOP 160059 PriA/YqbF domain
2 2 1 0 SCOP 116726 TrkA C-terminal domain-like
2 2 2 1 SCOP 53920 Fe-only hydrogenase
2 2 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
2 2 1 1 SCOP 140869 GUN4-like
2 2 2 0 SCOP 110836 Hypothetical protein SAV1430
2 2 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
2 2 2 0 SCOP 140860 Pseudo ankyrin repeat-like
2 1 1 0 SCOP 55116 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
2 2 1 0 SCOP 75420 YhbC-like, N-terminal domain
2 2 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
2 2 2 1 SCOP 140984 PTPA-like
2 2 1 0 SCOP 55261 GAD domain-like
2 2 1 0 SCOP 111388 Pollen allergen ole e 6
2 2 1 0 SCOP 57424 LDL receptor-like module
2 2 1 0 SCOP 81872 BRCA2 helical domain
2 2 1 0 SCOP 101931 Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain
2 2 2 0 SCOP 140586 Dcp2 domain-like
2 2 2 0 SCOP 103431 Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor
2 2 1 0 SCOP 144256 TSP9-like
2 2 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
2 2 1 0 SCOP 81878 BRCA2 tower domain
1 1 1 0 SCOP 64182 DHH phosphoesterases
1 1 1 1 SCOP 75625 YebC-like
1 1 1 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
1 1 1 0 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
1 1 1 1 SCOP 51283 dUTPase-like
1 1 1 1 SCOP 55387 Frataxin/Nqo15-like
1 1 1 0 SCOP 111278 SSo0622-like
1 1 1 0 SCOP 51645 Malate synthase G
1 1 1 0 SCOP 110849 ParB/Sulfiredoxin
1 1 1 0 SCOP 46988 Tubulin chaperone cofactor A
1 1 1 0 SCOP 143447 AMMECR1-like
1 1 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
1 1 1 0 SCOP 161041 Photosystem II reaction center protein I, PsbI
1 1 1 0 SCOP 161037 Photosystem II reaction center protein K, PsbK
1 1 1 0 SCOP 161055 PsbZ-like
1 1 1 1 SCOP 101546 ASF1-like
1 1 1 1 SCOP 118196 YaeB-like
1 1 1 0 SCOP 142754 NadA-like
1 1 1 1 SCOP 56266 DmpA/ArgJ-like
1 1 1 0 SCOP 58100 Bacterial hemolysins
1 1 1 0 SCOP 82697 PurS-like
1 1 1 0 SCOP 140663 TTHA0068-like
1 1 1 0 SCOP 56747 Prim-pol domain
1 1 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
1 1 1 0 SCOP 82093 Heme chaperone CcmE
1 1 1 0 SCOP 55608 Homing endonucleases
1 1 1 0 SCOP 69304 Tricorn protease N-terminal domain
1 1 1 1 SCOP 52009 Phosphohistidine domain
1 1 1 0 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
1 1 1 0 SCOP 58022 XRCC4, C-terminal oligomerization domain
1 1 1 0 SCOP 81464 Cytochrome c oxidase subunit II-like, transmembrane region
1 1 1 0 SCOP 89260 Collagen-binding domain
1 1 1 0 SCOP 68912 Rho N-terminal domain-like
1 1 1 1 SCOP 101904 GyrA/ParC C-terminal domain-like
1 1 1 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
1 1 1 1 SCOP 63882 MoeA N-terminal region -like
1 1 1 0 SCOP 141259 CarD-like
1 1 1 0 SCOP 144284 Sec2 N-terminal region
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 1 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 0 SCOP 140856 USP8 N-terminal domain-like
1 1 1 0 SCOP 57414 Hairpin loop containing domain-like
1 1 1 0 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 0 SCOP 69848 LCCL domain
1 1 1 0 SCOP 101420 C-terminal domain of Ku80
1 1 1 0 SCOP 143517 TRCF domain-like
1 1 1 0 SCOP 58050 N-terminal coiled coil domain from apc
1 1 1 0 SCOP 102741 Obg GTP-binding protein C-terminal domain
1 1 1 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
1 1 1 0 SCOP 109736 FGAM synthase PurL, linker domain
1 1 1 0 SCOP 160996 HI0933 insert domain-like

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The following superfamilies have one or more weak hits:

SCOP superfamily Troponin coil-coiled subunits
SCOP superfamily Head morphogenesis protein gp7
SCOP superfamily Zinc finger domain of DNA polymerase-alpha
SCOP superfamily Neurotransmitter-gated ion-channel transmembrane pore
SCOP superfamily GCM domain
SCOP superfamily MTH1187/YkoF-like
SCOP superfamily Proguanylin
SCOP superfamily Gametocyte protein Pfg27
SCOP superfamily Antibiotic binding domain of TipA-like multidrug resistance regulators
SCOP superfamily Cobalamin adenosyltransferase-like
SCOP superfamily Satellite viruses
SCOP superfamily ssDNA viruses
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily Cysteine-rich DNA binding domain, (DM domain)
SCOP superfamily Apical membrane antigen 1
SCOP superfamily TSP-1 type 1 repeat
SCOP superfamily Mechanosensitive channel protein MscS (YggB), C-terminal domain
SCOP superfamily GckA/TtuD-like
SCOP superfamily BAH domain
SCOP superfamily Antigen MPT63/MPB63 (immunoprotective extracellular protein)
SCOP superfamily Crustacean CHH/MIH/GIH neurohormone
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Photosystem I reaction center subunit X, PsaK
SCOP superfamily Subunit PsaX of photosystem I reaction centre
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
SCOP superfamily Mitochondrial cytochrome c oxidase subunit IV
SCOP superfamily ABC transporter involved in vitamin B12 uptake, BtuC
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Chemotaxis phosphatase CheZ
SCOP superfamily Siroheme synthase middle domains-like
SCOP superfamily Rotavirus NSP2 fragment, N-terminal domain
SCOP superfamily Archaeal IMP cyclohydrolase PurO
SCOP superfamily Plakin repeat
SCOP superfamily Rotavirus NSP2 fragment, C-terminal domain
SCOP superfamily HprK N-terminal domain-like
SCOP superfamily V-region of surface antigen I/II (SA I/II, PAC)
SCOP superfamily Variable surface antigen VlsE
SCOP superfamily TolA/TonB C-terminal domain
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily Colicin E3 receptor domain
SCOP superfamily NSP3 homodimer
SCOP superfamily Transcription factor NusA, N-terminal domain
SCOP superfamily Integrin beta tail domain
SCOP superfamily Cloacin translocation domain
SCOP superfamily Cell wall binding repeat
SCOP superfamily Nucleoplasmin-like core domain
SCOP superfamily Integrin domains
SCOP superfamily Nuclear receptor coactivator interlocking domain
SCOP superfamily AhpD-like
SCOP superfamily Hypothetical protein YjbJ
SCOP superfamily Bcr-Abl oncoprotein oligomerization domain
SCOP superfamily RecG, N-terminal domain
SCOP superfamily FAT domain of focal adhesion kinase
SCOP superfamily Protein-L-isoaspartyl O-methyltransferase, C-terminal domain
SCOP superfamily Recombination endonuclease VII, C-terminal and dimerization domains
SCOP superfamily F1 ATPase inhibitor, IF1, C-terminal domain
SCOP superfamily Intermediate filament protein, coiled coil region
SCOP superfamily Phase 1 flagellin
SCOP superfamily CNF1/YfiH-like putative cysteine hydrolases
SCOP superfamily Hsp33 domain
SCOP superfamily Methuselah ectodomain
SCOP superfamily Ribonuclease domain of colicin E3
SCOP superfamily Sortase
SCOP superfamily SAND domain-like
SCOP superfamily Cytolysin/lectin
SCOP superfamily Nicotinic receptor ligand binding domain-like
SCOP superfamily Ganglioside M2 (gm2) activator
SCOP superfamily Telomeric repeat binding factor (TRF) dimerisation domain
SCOP superfamily PTS-regulatory domain, PRD
SCOP superfamily Outer surface protein C (OspC)
SCOP superfamily Frizzled cysteine-rich domain
SCOP superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain
SCOP superfamily Colicin Ia, N-terminal domain
SCOP superfamily Clostridium neurotoxins, "coiled-coil" domain
SCOP superfamily Variant surface glycoprotein (N-terminal domain)
SCOP superfamily Virus ectodomain
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily Outer membrane lipoprotein
SCOP superfamily Multimerization domain of the phosphoprotein from sendai virus
SCOP superfamily Delta-sleep-inducing peptide immunoreactive peptide
SCOP superfamily Coiled-coil dimerization domain from cortexillin I
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Chicken cartilage matrix protein
SCOP superfamily Trimerization domain of TRAF
SCOP superfamily Inhibitor of apoptosis (IAP) repeat
SCOP superfamily Zn-binding domains of ADDBP
SCOP superfamily Ada DNA repair protein, N-terminal domain (N-Ada 10)
SCOP superfamily Zinc domain conserved in yeast copper-regulated transcription factors
SCOP superfamily Metallothionein
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
SCOP superfamily Hypothetical protein MTH1184
SCOP superfamily Zn2/Cys6 DNA-binding domain
SCOP superfamily HIPIP (high potential iron protein)
SCOP superfamily Carboxypeptidase inhibitor
SCOP superfamily Type X cellulose binding domain, CBDX
SCOP superfamily FnI-like domain
SCOP superfamily Methylamine dehydrogenase, L chain
SCOP superfamily Cystine-knot cytokines
SCOP superfamily Trefoil
SCOP superfamily Amb V allergen
SCOP superfamily Bowman-Birk inhibitor, BBI
SCOP superfamily Anthrax protective antigen
SCOP superfamily Viral glycoprotein, central and dimerisation domains
SCOP superfamily Leukocidin-like
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily Porins
SCOP superfamily Outer membrane phospholipase A (OMPLA)
SCOP superfamily Bcl-2 inhibitors of programmed cell death
SCOP superfamily delta-Endotoxin (insectocide), N-terminal domain
SCOP superfamily Diphtheria toxin, middle domain
SCOP superfamily Colicin
SCOP superfamily Reovirus inner layer core protein p3
SCOP superfamily Major capsid protein gp5
SCOP superfamily Methionine synthase activation domain-like
SCOP superfamily gp120 core
SCOP superfamily Fibrinogen C-terminal domain-like
SCOP superfamily SRCR-like
SCOP superfamily 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
SCOP superfamily CytB endotoxin-like
SCOP superfamily Regulatory factor Nef
SCOP superfamily Origin of replication-binding domain, RBD-like
SCOP superfamily tRNA-intron endonuclease N-terminal domain-like
SCOP superfamily Hedgehog/DD-peptidase
SCOP superfamily Formylmethanofuran:tetrahydromethanopterin formyltransferase
SCOP superfamily Nucleotide cyclase
SCOP superfamily Translational regulator protein regA
SCOP superfamily Killer toxin KP6 alpha-subunit
SCOP superfamily Pyrimidine nucleoside phosphorylase C-terminal domain
SCOP superfamily Heme-binding protein A (HasA)
SCOP superfamily Superantigen toxins, C-terminal domain
SCOP superfamily Staphylokinase/streptokinase
SCOP superfamily Interleukin 8-like chemokines
SCOP superfamily Prion-like
SCOP superfamily RNase A-like
SCOP superfamily FucI/AraA N-terminal and middle domains
SCOP superfamily Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
SCOP superfamily Methylated DNA-protein cysteine methyltransferase domain
SCOP superfamily Nitrogenase accessory factor-like
SCOP superfamily Methylesterase CheB, C-terminal domain
SCOP superfamily Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
SCOP superfamily N-(deoxy)ribosyltransferase-like
SCOP superfamily Hypothetical protein MTH538
SCOP superfamily Cobalamin (vitamin B12)-dependent enzymes
SCOP superfamily E2 regulatory, transactivation domain
SCOP superfamily Hedgehog/intein (Hint) domain
SCOP superfamily Duplicated hybrid motif
SCOP superfamily Fibre shaft of virus attachment proteins
SCOP superfamily Insect cysteine-rich antifreeze protein
SCOP superfamily delta-Endotoxin (insectocide), middle domain
SCOP superfamily Vitelline membrane outer protein-I (VMO-I)
SCOP superfamily Nitrous oxide reductase, N-terminal domain
SCOP superfamily TolB, C-terminal domain
SCOP superfamily Tachylectin-2
SCOP superfamily Avidin/streptavidin
SCOP superfamily XRCC4, N-terminal domain
SCOP superfamily Core binding factor beta, CBF
SCOP superfamily TIMP-like
SCOP superfamily Myosin S1 fragment, N-terminal domain
SCOP superfamily EV matrix protein
SCOP superfamily Spermadhesin, CUB domain
SCOP superfamily Virus attachment protein globular domain
SCOP superfamily ENV polyprotein, receptor-binding domain
SCOP superfamily Viral protein domain
SCOP superfamily Group II dsDNA viruses VP
SCOP superfamily gamma-Crystallin-like
SCOP superfamily Rab geranylgeranyltransferase alpha-subunit, insert domain
SCOP superfamily Carbohydrate-binding domain
SCOP superfamily Superoxide reductase-like
SCOP superfamily CBD9-like
SCOP superfamily Immunoglobulin
SCOP superfamily Moesin tail domain
SCOP superfamily Tetraspanin
SCOP superfamily Peridinin-chlorophyll protein
SCOP superfamily Nuclear receptor ligand-binding domain
SCOP superfamily Cytochrome c oxidase subunit E
SCOP superfamily Lipovitellin-phosvitin complex, superhelical domain
SCOP superfamily Ras GEF
SCOP superfamily Aldehyde ferredoxin oxidoreductase, C-terminal domains
SCOP superfamily Class II MHC-associated invariant chain ectoplasmic trimerization domain
SCOP superfamily TrpR-like
SCOP superfamily Uteroglobin-like
SCOP superfamily Transcription factor STAT-4 N-domain
SCOP superfamily DBL homology domain (DH-domain)
SCOP superfamily Guanido kinase N-terminal domain
SCOP superfamily FliG
SCOP superfamily N-terminal domain of DnaB helicase
SCOP superfamily DEATH domain
SCOP superfamily Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
SCOP superfamily Bacteriocin AS-48
SCOP superfamily Apolipophorin-III
SCOP superfamily Retroviral matrix proteins
SCOP superfamily Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
SCOP superfamily lambda integrase-like, N-terminal domain
SCOP superfamily IHF-like DNA-binding proteins
SCOP superfamily STAT
SCOP superfamily Cloroperoxidase
SCOP superfamily Insect pheromone/odorant-binding proteins
SCOP superfamily Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
SCOP superfamily ROP protein
SCOP superfamily 4-helical cytokines
SCOP superfamily Bacterial GAP domain
SCOP superfamily alpha-catenin/vinculin-like
SCOP superfamily Hemerythrin-like
SCOP superfamily Cytochromes
SCOP superfamily Aspartate receptor, ligand-binding domain
SCOP superfamily Apolipoprotein
SCOP superfamily Fertilization protein
SCOP superfamily RAP domain-like
SCOP superfamily Protozoan pheromone proteins
SCOP superfamily Enzyme IIa from lactose specific PTS, IIa-lac
SCOP superfamily Spectrin repeat
SCOP superfamily C-terminal effector domain of the bipartite response regulators
SCOP superfamily Epsilon subunit of F1F0-ATP synthase C-terminal domain
SCOP superfamily Eukaryotic DNA topoisomerase I, dispensable insert domain
SCOP superfamily HR1 repeat
SCOP superfamily GreA transcript cleavage protein, N-terminal domain
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily Gam-like
SCOP superfamily RILP dimerisation region
SCOP superfamily T-antigen specific domain-like
SCOP superfamily E7 C-terminal domain-like
SCOP superfamily E6 C-terminal domain-like
SCOP superfamily YfgJ-like
SCOP superfamily MgtE membrane domain-like
SCOP superfamily SNF-like
SCOP superfamily ATP synthase B chain-like
SCOP superfamily flu NP-like
SCOP superfamily CV3147-like
SCOP superfamily SSO1389-like
SCOP superfamily AF1531-like
SCOP superfamily MalF N-terminal region-like
SCOP superfamily YacF-like
SCOP superfamily VPA0735-like
SCOP superfamily FlhC-like
SCOP superfamily Rv2827c C-terminal domain-like
SCOP superfamily NE1680-like
SCOP superfamily YugN-like
SCOP superfamily gpW/gp25-like
SCOP superfamily YehR-like
SCOP superfamily YueI-like
SCOP superfamily BRK domain-like
SCOP superfamily BLRF2-like
SCOP superfamily YdfO-like
SCOP superfamily NosL/MerB-like
SCOP superfamily SP0830-like
SCOP superfamily MTH889-like
SCOP superfamily Bacterial polysaccharide co-polymerase-like
SCOP superfamily EspE N-terminal domain-like
SCOP superfamily FlaG-like
SCOP superfamily NMB0488-like
SCOP superfamily YcgL-like
SCOP superfamily NSP3A-like
SCOP superfamily YdgH-like
SCOP superfamily YerB-like
SCOP superfamily Dhaf3308-like
SCOP superfamily Cgl1923-like
SCOP superfamily PA1994-like
SCOP superfamily EutN/CcmL-like
SCOP superfamily BC4932-like
SCOP superfamily Smr-associated domain-like
SCOP superfamily NEAT domain-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily PMT central region-like
SCOP superfamily AGR C 984p-like
SCOP superfamily MgtE N-terminal domain-like
SCOP superfamily SMc04008-like
SCOP superfamily TerB-like
SCOP superfamily RPA2825-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily BH3980-like
SCOP superfamily TAFH domain-like
SCOP superfamily FLJ32549 domain-like
SCOP superfamily DsbB-like
SCOP superfamily Ta0600-like
SCOP superfamily Bacillus cereus metalloprotein-like
SCOP superfamily HP0062-like
SCOP superfamily TM1646-like
SCOP superfamily AF1782-like
SCOP superfamily occludin/ELL-like
SCOP superfamily MPN010-like
SCOP superfamily Vanabin-like
SCOP superfamily FdhE-like
SCOP superfamily YwmB-like
SCOP superfamily PHP14-like
SCOP superfamily ApbE-like
SCOP superfamily YojJ-like
SCOP superfamily GAS2 domain-like
SCOP superfamily TM1622-like
SCOP superfamily TTP0101/SSO1404-like
SCOP superfamily Transposase IS200-like
SCOP superfamily TTHA1013/TTHA0281-like
SCOP superfamily YjbR-like
SCOP superfamily PhtA domain-like
SCOP superfamily ComB-like
SCOP superfamily CinA-like
SCOP superfamily Bacteriophage trimeric proteins domain
SCOP superfamily TM0957-like
SCOP superfamily Kinase-associated protein B-like
SCOP superfamily Atu1913-like
SCOP superfamily Agglutinin HPA-like
SCOP superfamily RelB-like
SCOP superfamily Duffy binding domain-like
SCOP superfamily DNA terminal protein
SCOP superfamily PriB N-terminal domain-like
SCOP superfamily TROVE domain-like
SCOP superfamily Rv1873-like
SCOP superfamily Phage replication organizer domain
SCOP superfamily IpaD-like
SCOP superfamily YfmB-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily YozE-like
SCOP superfamily Type III secretion system domain
SCOP superfamily FlgN-like
SCOP superfamily BAS1536-like
SCOP superfamily LemA-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily YppE-like
SCOP superfamily Vng1086c-like
SCOP superfamily SPy1572-like
SCOP superfamily Synuclein
SCOP superfamily HSP33 redox switch-like
SCOP superfamily Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain
SCOP superfamily Connexin43
SCOP superfamily Proton glutamate symport protein
SCOP superfamily Viral ssDNA binding protein
SCOP superfamily TM1631-like
SCOP superfamily Hypothetical protein PA1324
SCOP superfamily DNA primase DnaG, C-terminal domain
SCOP superfamily Hypothetical protein MPN330
SCOP superfamily Hypothetical protein YqbG
SCOP superfamily Avirulence protein AvrPto
SCOP superfamily XseB-like
SCOP superfamily Fzo-like conserved region
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily Geminin coiled-coil domain
SCOP superfamily Hormone receptor domain
SCOP superfamily OmpH-like
SCOP superfamily QueA-like
SCOP superfamily Recombination protein RecR
SCOP superfamily Hypothetical protein yfbM
SCOP superfamily Hypothetical protein PF0899
SCOP superfamily Hypothetical protein MTH677
SCOP superfamily Glycerate kinase I
SCOP superfamily CutC-like
SCOP superfamily GlpP-like
SCOP superfamily BTV NS2-like ssRNA-binding domain
SCOP superfamily Her-1
SCOP superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
SCOP superfamily I/LWEQ domain
SCOP superfamily CAPPD, an extracellular domain of amyloid beta A4 protein
SCOP superfamily Phenylalanine zipper
SCOP superfamily Bacteriocin immunity protein-like
SCOP superfamily Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
SCOP superfamily Nickel-containing superoxide dismutase, NiSOD
SCOP superfamily PhoU-like
SCOP superfamily Alpha-hemoglobin stabilizing protein AHSP
SCOP superfamily HBS1-like domain
SCOP superfamily DnaK suppressor protein DksA, alpha-hairpin domain
SCOP superfamily Proline/betaine transporter ProP, C-terminal cytoplasmic domain
SCOP superfamily G protein-binding domain
SCOP superfamily TSP type-3 repeat
SCOP superfamily Plexin repeat
SCOP superfamily Autotransporter
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily Virulence-associated V antigen
SCOP superfamily Hypothetical protein HI1480
SCOP superfamily Sensory domain-like
SCOP superfamily Ta1353-like
SCOP superfamily CheC-like
SCOP superfamily Hypothetical protein TT1725
SCOP superfamily mRNA decapping enzyme DcpS N-terminal domain
SCOP superfamily NIF3 (NGG1p interacting factor 3)-like
SCOP superfamily F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD)
SCOP superfamily Adhesin YadA, collagen-binding domain
SCOP superfamily Apyrase
SCOP superfamily Hypothetical protein YgiW
SCOP superfamily Hydrophobin II, HfbII
SCOP superfamily Hypothetical protein YfhH
SCOP superfamily Dextranase, N-terminal domain
SCOP superfamily Anti-sigma factor FlgM
SCOP superfamily Stathmin
SCOP superfamily ADP-ribosylglycohydrolase
SCOP superfamily Hsp90 co-chaperone CDC37
SCOP superfamily YgfB-like
SCOP superfamily YcfC-like
SCOP superfamily Invasion protein A (SipA) , C-terminal actin binding domain
SCOP superfamily Methenyltetrahydrofolate cyclohydrolase-like
SCOP superfamily Flavivirus capsid protein C
SCOP superfamily Flagellar export chaperone FliS
SCOP superfamily Typo IV secretion system protein TraC
SCOP superfamily B-form DNA mimic Ocr
SCOP superfamily Chemosensory protein Csp2
SCOP superfamily IP3 receptor type 1 binding core, domain 2
SCOP superfamily Plant proteinase inhibitors
SCOP superfamily Kazal-type serine protease inhibitors

Jump to [ Top of page · Assignment statistics ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.