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  Home > Genomes > Superfamily assignments for Plasmodium falciparum 3D7


Plasmodium falciparum 3D7 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; Plasmodium falciparum 3D7

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 5385 total
2735 (51 %) with assignment
762 average length
22 % amino acid coverage
Domains: 4219 total
664 unique superfamilies
320 unique families
327 average length
6.4 average superfamily size
84 % formed by duplication
Domain combinations: 407 domain pairs
1405 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
382 289 94 8 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
298 71 26 1 SCOP 140924 Duffy binding domain-like
117 111 26 2 SCOP 56112 Protein kinase-like (PK-like)
106 82 26 1 SCOP 54928 RNA-binding domain, RBD
104 89 23 1 SCOP 50978 WD40 repeat-like
102 83 31 7 SCOP 48371 ARM repeat
73 70 14 1 SCOP 47473 EF-hand
67 56 28 3 SCOP 50249 Nucleic acid-binding proteins
60 57 11 7 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
57 40 23 1 SCOP 48452 TPR-like
53 44 15 4 SCOP 52833 Thioredoxin-like
52 50 18 1 SCOP 57850 RING/U-box
51 50 21 0 SCOP 46565 Chaperone J-domain
41 22 12 3 SCOP 53067 Actin-like ATPase domain
39 38 14 4 SCOP 54001 Cysteine proteinases
38 38 4 0 SCOP 53474 alpha/beta-Hydrolases
33 31 6 0 SCOP 103473 MFS general substrate transporter
31 27 16 1 SCOP 54236 Ubiquitin-like
29 28 19 7 SCOP 51735 NAD(P)-binding Rossmann-fold domains
28 27 13 2 SCOP 56784 HAD-like
27 26 18 2 SCOP 50447 Translation proteins
26 24 17 2 SCOP 55681 Class II aaRS and biotin synthetases
25 22 18 1 SCOP 52374 Nucleotidylyl transferase
24 24 19 3 SCOP 54211 Ribosomal protein S5 domain 2-like
23 18 13 3 SCOP 51905 FAD/NAD(P)-binding domain
23 12 9 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
22 21 10 0 SCOP 46785 "Winged helix" DNA-binding domain
21 13 8 1 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
19 18 4 2 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
19 19 7 2 SCOP 64356 SNARE-like
19 19 10 2 SCOP 50729 PH domain-like
19 12 5 0 SCOP 90229 CCCH zinc finger
18 16 10 3 SCOP 53098 Ribonuclease H-like
18 18 4 1 SCOP 50182 Sm-like ribonucleoproteins
18 18 7 1 SCOP 54495 UBC-like
18 6 6 1 SCOP 63411 LuxS/MPP-like metallohydrolase
17 15 7 1 SCOP 55120 Pseudouridine synthase
17 17 8 2 SCOP 56300 Metallo-dependent phosphatases
17 14 9 0 SCOP 51161 Trimeric LpxA-like enzymes
17 15 7 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
17 16 10 1 SCOP 48403 Ankyrin repeat
17 10 9 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
16 16 4 0 SCOP 49764 HSP20-like chaperones
16 10 7 1 SCOP 50985 RCC1/BLIP-II
16 11 11 1 SCOP 53300 vWA-like
16 8 7 1 SCOP 54980 EF-G C-terminal domain-like
15 13 8 1 SCOP 81606 PP2C-like
15 12 9 0 SCOP 46689 Homeodomain-like
15 13 5 1 SCOP 103506 Mitochondrial carrier
15 15 4 0 SCOP 144091 Rhomboid-like
15 13 10 0 SCOP 69349 Phage fibre proteins
15 10 9 0 SCOP 57903 FYVE/PHD zinc finger
15 7 6 0 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
14 13 7 0 SCOP 58038 SNARE fusion complex
14 14 4 1 SCOP 56801 Acetyl-CoA synthetase-like
14 13 9 1 SCOP 81665 Calcium ATPase, transmembrane domain M
14 10 6 0 SCOP 47954 Cyclin-like
14 7 6 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
13 13 5 1 SCOP 50104 Translation proteins SH3-like domain
13 12 6 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
13 8 7 0 SCOP 49785 Galactose-binding domain-like
13 13 4 1 SCOP 50630 Acid proteases
13 12 5 0 SCOP 52058 L domain-like
13 13 4 0 SCOP 141571 Pentapeptide repeat-like
12 8 5 4 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
12 10 8 1 SCOP 52402 Adenine nucleotide alpha hydrolases-like
12 12 5 1 SCOP 47113 Histone-fold
12 12 5 1 SCOP 50891 Cyclophilin-like
12 9 8 1 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
12 10 7 0 SCOP 52047 RNI-like
12 4 4 0 SCOP 51206 cAMP-binding domain-like
12 10 5 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
12 9 6 0 SCOP 90123 ABC transporter transmembrane region
12 12 8 0 SCOP 81653 Calcium ATPase, transduction domain A
11 4 4 0 SCOP 81901 HCP-like
11 9 4 1 SCOP 56219 DNase I-like
11 11 8 0 SCOP 82199 SET domain
11 11 9 0 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
11 11 3 2 SCOP 52029 GroEL apical domain-like
10 9 7 2 SCOP 56059 Glutathione synthetase ATP-binding domain-like
10 10 4 4 SCOP 53383 PLP-dependent transferases
10 6 5 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
10 9 7 0 SCOP 52954 Class II aaRS ABD-related
10 10 8 2 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
10 10 8 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
10 8 5 0 SCOP 57667 beta-beta-alpha zinc fingers
10 10 2 2 SCOP 48592 GroEL equatorial domain-like
10 9 7 1 SCOP 117281 Kelch motif
10 7 3 0 SCOP 57196 EGF/Laminin
10 10 2 0 SCOP 54849 GroEL-intermediate domain like
10 8 5 0 SCOP 82895 TSP-1 type 1 repeat
9 7 6 1 SCOP 53448 Nucleotide-diphospho-sugar transferases
9 9 4 0 SCOP 57829 Zn-binding ribosomal proteins
9 9 6 2 SCOP 55315 L30e-like
9 8 7 2 SCOP 56672 DNA/RNA polymerases
9 6 5 0 SCOP 81296 E set domains
9 9 3 0 SCOP 46579 Prefoldin
9 9 6 0 SCOP 57997 Tropomyosin
9 9 6 0 SCOP 49899 Concanavalin A-like lectins/glucanases
9 6 4 0 SCOP 55073 Nucleotide cyclase
9 9 5 0 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
8 7 6 1 SCOP 55920 Creatinase/aminopeptidase
8 8 6 1 SCOP 75217 alpha/beta knot
8 7 6 0 SCOP 57783 Zinc beta-ribbon
8 8 6 1 SCOP 81301 Nucleotidyltransferase
8 7 7 0 SCOP 46934 UBA-like
8 5 4 0 SCOP 69848 LCCL domain
7 6 5 1 SCOP 52317 Class I glutamine amidotransferase-like
7 7 5 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
7 6 6 0 SCOP 100950 NagB/RpiA/CoA transferase-like
7 6 4 2 SCOP 52096 ClpP/crotonase
7 6 4 1 SCOP 53254 Phosphoglycerate mutase-like
7 7 7 1 SCOP 88723 PIN domain-like
7 6 6 0 SCOP 51230 Single hybrid motif
7 6 5 0 SCOP 50965 Galactose oxidase, central domain
7 7 5 0 SCOP 47370 Bromodomain
6 6 5 1 SCOP 53137 Translational machinery components
6 5 3 0 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
6 5 5 1 SCOP 56104 SAICAR synthase-like
6 5 3 1 SCOP 47027 Acyl-CoA binding protein
6 6 3 0 SCOP 55257 RBP11-like subunits of RNA polymerase
6 6 3 1 SCOP 55961 Bet v1-like
6 5 4 1 SCOP 52151 FabD/lysophospholipase-like
6 5 5 3 SCOP 52467 DHS-like NAD/FAD-binding domain
6 5 4 0 SCOP 49879 SMAD/FHA domain
6 6 6 0 SCOP 88697 PUA domain-like
6 6 3 1 SCOP 52490 Tubulin nucleotide-binding domain-like
6 6 6 1 SCOP 47616 GST C-terminal domain-like
6 3 2 1 SCOP 55979 DNA clamp
6 6 4 0 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
6 6 3 0 SCOP 47661 t-snare proteins
6 6 3 1 SCOP 55307 Tubulin C-terminal domain-like
6 6 6 0 SCOP 101967 Adhesin YadA, collagen-binding domain
6 6 4 0 SCOP 144232 HIT/MYND zinc finger-like
6 2 2 0 SCOP 53738 Phosphoglucomutase, first 3 domains
6 4 3 0 SCOP 57184 Growth factor receptor domain
6 6 5 0 SCOP 52087 CRAL/TRIO domain
6 4 4 1 SCOP 56204 Hect, E3 ligase catalytic domain
6 5 3 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
6 5 5 0 SCOP 51045 WW domain
6 6 5 0 SCOP 143503 PUG domain-like
5 4 3 2 SCOP 53271 PRTase-like
5 4 2 1 SCOP 53613 Ribokinase-like
5 4 2 1 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
5 4 2 1 SCOP 75620 Release factor
5 5 3 0 SCOP 55174 Alpha-L RNA-binding motif
5 4 4 0 SCOP 52980 Restriction endonuclease-like
5 3 2 0 SCOP 81333 F1F0 ATP synthase subunit C
5 4 4 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
5 5 3 0 SCOP 102114 Radical SAM enzymes
5 4 3 0 SCOP 47095 HMG-box
5 5 1 0 SCOP 144122 Tim10-like
5 5 2 1 SCOP 109604 HD-domain/PDEase-like
5 5 2 1 SCOP 52799 (Phosphotyrosine protein) phosphatases II
5 4 3 1 SCOP 56815 Sec1/munc18-like (SM) proteins
5 4 4 2 SCOP 52768 Arginase/deacetylase
5 4 4 0 SCOP 103025 Folate-binding domain
5 3 3 1 SCOP 53901 Thiolase-like
5 5 2 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
5 1 1 0 SCOP 50199 Staphylococcal nuclease
5 5 4 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
5 5 3 0 SCOP 50156 PDZ domain-like
5 5 3 0 SCOP 48019 post-AAA+ oligomerization domain-like
5 4 4 0 SCOP 52075 Outer arm dynein light chain 1
5 5 3 1 SCOP 81631 PAP/OAS1 substrate-binding domain
5 3 3 0 SCOP 55945 TATA-box binding protein-like
5 4 4 0 SCOP 54160 Chromo domain-like
5 3 3 1 SCOP 158702 Sec63 N-terminal domain-like
5 5 4 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
5 5 5 0 SCOP 49348 Clathrin adaptor appendage domain
5 5 5 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
5 5 5 1 SCOP 54585 Cdc48 domain 2-like
4 4 3 2 SCOP 51556 Metallo-dependent hydrolases
4 4 3 0 SCOP 56808 Ribosomal protein L1
4 4 3 3 SCOP 51366 Ribulose-phoshate binding barrel
4 3 3 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
4 4 2 0 SCOP 54999 Ribosomal protein S10
4 4 3 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
4 4 3 0 SCOP 52080 Ribosomal proteins L15p and L18e
4 2 1 1 SCOP 53784 Phosphofructokinase
4 4 4 0 SCOP 110324 Ribosomal L27 protein-like
4 3 3 1 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
4 4 3 1 SCOP 51395 FMN-linked oxidoreductases
4 4 4 0 SCOP 52949 Macro domain-like
4 3 2 0 SCOP 55753 Actin depolymerizing proteins
4 4 1 1 SCOP 54648 DLC
4 4 4 0 SCOP 47819 HRDC-like
4 4 3 0 SCOP 51197 Clavaminate synthase-like
4 4 3 1 SCOP 47576 Calponin-homology domain, CH-domain
4 3 3 1 SCOP 55931 Glutamine synthetase/guanido kinase
4 4 3 0 SCOP 81324 Voltage-gated potassium channels
4 2 2 0 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
4 4 3 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
4 4 2 0 SCOP 82704 AlbA-like
4 4 2 1 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
4 4 4 0 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
4 4 4 1 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
4 3 3 1 SCOP 56719 Type II DNA topoisomerase
4 4 2 1 SCOP 52922 TK C-terminal domain-like
4 4 4 0 SCOP 81995 beta-sandwich domain of Sec23/24
4 3 3 1 SCOP 52440 PreATP-grasp domain
4 3 3 1 SCOP 52210 Succinyl-CoA synthetase domains
4 4 4 3 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
4 4 1 0 SCOP 57863 ArfGap/RecO-like zinc finger
4 4 4 0 SCOP 63380 Riboflavin synthase domain-like
4 3 3 0 SCOP 90209 Ran binding protein zinc finger-like
4 4 4 0 SCOP 52113 BRCT domain
4 4 4 1 SCOP 54373 FAD-linked reductases, C-terminal domain
4 4 3 0 SCOP 46938 CRAL/TRIO N-terminal domain
4 4 2 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
4 4 4 0 SCOP 47769 SAM/Pointed domain
4 4 3 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
4 4 4 0 SCOP 49599 TRAF domain-like
4 3 3 0 SCOP 109905 Surp module (SWAP domain)
4 4 2 0 SCOP 110942 HSP90 C-terminal domain
4 4 4 0 SCOP 75553 Smc hinge domain
4 4 2 0 SCOP 55277 GYF domain
4 4 4 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
4 4 2 0 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
3 3 2 2 SCOP 51569 Aldolase
3 3 3 0 SCOP 54843 Ribosomal protein L22
3 3 2 1 SCOP 56047 Ribosomal protein S8
3 3 3 0 SCOP 52218 Flavoproteins
3 3 3 1 SCOP 82649 SufE/NifU
3 3 3 0 SCOP 160369 Ribosomal protein L10-like
3 2 2 0 SCOP 50129 GroES-like
3 3 2 0 SCOP 47060 S15/NS1 RNA-binding domain
3 3 3 0 SCOP 48150 DNA-glycosylase
3 3 1 0 SCOP 89360 HesB-like domain
3 3 3 1 SCOP 51713 tRNA-guanine transglycosylase
3 3 3 1 SCOP 50715 Ribosomal protein L25-like
3 3 2 1 SCOP 54292 2Fe-2S ferredoxin-like
3 3 2 2 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
3 3 2 0 SCOP 55811 Nudix
3 3 3 1 SCOP 53187 Zn-dependent exopeptidases
3 3 3 0 SCOP 56988 Anthrax protective antigen
3 3 3 1 SCOP 54534 FKBP-like
3 3 2 2 SCOP 46626 Cytochrome c
3 3 3 0 SCOP 54427 NTF2-like
3 3 2 1 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
3 2 2 0 SCOP 144000 Oxysterol-binding protein-like
3 2 2 0 SCOP 56019 The spindle assembly checkpoint protein mad2
3 2 2 1 SCOP 48439 Protein prenylyltransferase
3 3 2 2 SCOP 52972 ITPase-like
3 2 2 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
3 3 2 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
3 3 2 0 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
3 3 3 1 SCOP 55159 eIF1-like
3 2 2 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
3 3 3 0 SCOP 54695 POZ domain
3 2 2 1 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
3 2 2 0 SCOP 46955 Putative DNA-binding domain
3 3 3 0 SCOP 50692 ADC-like
3 3 2 0 SCOP 54736 ClpS-like
3 2 2 1 SCOP 103365 Hypothetical protein PH1602
3 2 2 0 SCOP 50486 FMT C-terminal domain-like
3 2 2 0 SCOP 56024 Phospholipase D/nuclease
3 3 3 0 SCOP 82171 DPP6 N-terminal domain-like
3 2 2 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
3 3 1 0 SCOP 56726 DNA topoisomerase IV, alpha subunit
3 3 1 1 SCOP 89124 Nop domain
3 3 3 1 SCOP 55186 ThrRS/AlaRS common domain
3 3 3 1 SCOP 52777 CoA-dependent acyltransferases
3 3 2 1 SCOP 52743 Subtilisin-like
3 3 3 0 SCOP 81923 Double Clp-N motif
3 3 2 0 SCOP 48537 Phospholipase C/P1 nuclease
3 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
3 3 2 0 SCOP 48334 DNA repair protein MutS, domain III
3 3 2 1 SCOP 140990 FtsH protease domain-like
3 3 2 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
3 3 1 1 SCOP 56327 LDH C-terminal domain-like
3 3 1 0 SCOP 117892 Band 7/SPFH domain
3 2 2 0 SCOP 118310 AN1-like Zinc finger
3 3 2 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
3 3 1 1 SCOP 81271 TGS-like
3 3 2 0 SCOP 57845 B-box zinc-binding domain
3 3 3 1 SCOP 48445 14-3-3 protein
3 3 1 0 SCOP 158573 GINS helical bundle-like
3 3 2 0 SCOP 47391 Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
3 3 2 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
3 3 2 0 SCOP 48464 ENTH/VHS domain
3 2 2 0 SCOP 57889 Cysteine-rich domain
3 3 2 0 SCOP 75001 Dipeptidyl peptidase I (cathepsin C), exclusion domain
3 3 3 0 SCOP 82051 Obg GTP-binding protein N-terminal domain
3 3 3 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
3 3 1 0 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
3 3 2 0 SCOP 55666 Ribonuclease PH domain 2-like
3 3 2 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
3 2 2 0 SCOP 81698 FF domain
3 3 3 1 SCOP 81811 Helical domain of Sec23/24
3 3 3 0 SCOP 82919 Zn-finger domain of Sec23/24
2 2 2 1 SCOP 81338 Aquaporin-like
2 2 2 0 SCOP 53927 Cytidine deaminase-like
2 2 2 2 SCOP 53697 SIS domain
2 2 2 1 SCOP 54197 HIT-like
2 2 2 0 SCOP 89919 Ribosome-binding factor A, RbfA
2 2 2 1 SCOP 52166 Ribosomal protein L4
2 2 2 1 SCOP 54686 Ribosomal protein L16p/L10e
2 2 1 1 SCOP 50193 Ribosomal protein L14
2 2 2 0 SCOP 64263 Prokaryotic ribosomal protein L17
2 2 2 1 SCOP 47240 Ferritin-like
2 2 1 0 SCOP 141091 L21p-like
2 2 1 0 SCOP 143800 L28p-like
2 2 1 0 SCOP 47336 ACP-like
2 2 2 1 SCOP 51695 PLC-like phosphodiesterases
2 2 1 1 SCOP 50324 Inorganic pyrophosphatase
2 2 2 1 SCOP 53850 Periplasmic binding protein-like II
2 2 2 0 SCOP 52161 Ribosomal protein L13
2 2 2 1 SCOP 51351 Triosephosphate isomerase (TIM)
2 2 1 0 SCOP 55194 Ribosome recycling factor, RRF
2 2 2 1 SCOP 51316 Mss4-like
2 1 1 1 SCOP 103263 Chorismate synthase, AroC
2 2 1 0 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
2 2 2 1 SCOP 52313 Ribosomal protein S2
2 2 2 0 SCOP 101908 Putative isomerase YbhE
2 2 2 0 SCOP 55205 EPT/RTPC-like
2 2 2 1 SCOP 48576 Terpenoid synthases
2 2 1 0 SCOP 55129 Ribosomal protein L30p/L7e
2 2 2 0 SCOP 46561 Ribosomal protein L29 (L29p)
2 2 2 2 SCOP 51419 PLP-binding barrel
2 2 2 0 SCOP 54995 Ribosomal protein S6
2 2 2 0 SCOP 144217 CSL zinc finger
2 2 2 1 SCOP 51430 NAD(P)-linked oxidoreductase
2 2 1 1 SCOP 48256 Citrate synthase
2 2 2 0 SCOP 48613 Heme oxygenase-like
2 2 1 0 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
2 2 1 0 SCOP 140718 Mediator hinge subcomplex-like
2 2 2 1 SCOP 57798 Casein kinase II beta subunit
2 1 1 0 SCOP 111278 SSo0622-like
2 2 2 0 SCOP 63393 RNA polymerase subunits
2 2 2 0 SCOP 51445 (Trans)glycosidases
2 2 1 1 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
2 2 2 0 SCOP 51306 LexA/Signal peptidase
2 2 2 0 SCOP 51182 RmlC-like cupins
2 2 2 0 SCOP 55781 GAF domain-like
2 2 1 0 SCOP 47694 Cytochrome c oxidase subunit h
2 2 1 0 SCOP 49777 PEBP-like
2 2 2 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
2 2 2 1 SCOP 143113 NAP-like
2 2 2 0 SCOP 55418 eIF4e-like
2 2 2 0 SCOP 46988 Tubulin chaperone cofactor A
2 2 2 0 SCOP 64268 PX domain
2 2 2 2 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
2 2 2 0 SCOP 54631 CBS-domain pair
2 1 1 0 SCOP 56601 beta-lactamase/transpeptidase-like
2 2 2 0 SCOP 50494 Trypsin-like serine proteases
2 2 2 1 SCOP 56349 DNA breaking-rejoining enzymes
2 2 2 1 SCOP 50022 ISP domain
2 2 1 0 SCOP 50800 PK beta-barrel domain-like
2 2 2 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
2 1 1 0 SCOP 143081 BB1717-like
2 1 1 0 SCOP 143456 VC0467-like
2 2 2 0 SCOP 109910 YgfY-like
2 1 1 0 SCOP 160909 ATP12-like
2 2 2 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
2 2 2 0 SCOP 57802 Rubredoxin-like
2 2 2 0 SCOP 69322 Tricorn protease domain 2
2 1 1 0 SCOP 117457 FumA C-terminal domain-like
2 2 1 0 SCOP 161070 SNF-like
2 2 1 1 SCOP 103196 Roadblock/LC7 domain
2 2 2 0 SCOP 47781 RuvA domain 2-like
2 2 2 0 SCOP 47592 SWIB/MDM2 domain
2 2 2 0 SCOP 54984 eEF-1beta-like
2 2 2 1 SCOP 46548 alpha-helical ferredoxin
2 2 2 0 SCOP 102462 Peptidyl-tRNA hydrolase II
2 1 1 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
2 2 2 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
2 2 1 0 SCOP 50370 Ricin B-like lectins
2 2 2 0 SCOP 101898 NHL repeat
2 2 2 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
2 2 2 0 SCOP 102645 CoaB-like
2 2 1 0 SCOP 52935 PK C-terminal domain-like
2 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
2 2 2 0 SCOP 51971 Nucleotide-binding domain
2 2 1 0 SCOP 55658 L9 N-domain-like
2 2 2 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
2 2 2 0 SCOP 51120 beta-Roll
2 2 2 0 SCOP 68906 SAP domain
2 1 1 0 SCOP 56042 PurM C-terminal domain-like
2 1 1 0 SCOP 53920 Fe-only hydrogenase
2 2 2 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
2 2 1 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
2 2 2 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
2 2 2 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
2 2 2 0 SCOP 54768 dsRNA-binding domain-like
2 2 1 0 SCOP 56496 Fibrinogen C-terminal domain-like
2 2 1 0 SCOP 55637 Cell cycle regulatory proteins
2 2 1 0 SCOP 47794 Rad51 N-terminal domain-like
2 1 1 0 SCOP 56053 Ribosomal protein L6
2 2 2 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
2 2 2 0 SCOP 63748 Tudor/PWWP/MBT
2 2 2 0 SCOP 74924 Cap-Gly domain
2 2 2 0 SCOP 54991 Anticodon-binding domain of PheRS
2 2 2 0 SCOP 55271 DNA repair protein MutS, domain I
2 2 2 0 SCOP 74788 Cullin repeat-like
2 2 2 0 SCOP 69000 FAD-dependent thiol oxidase
2 2 1 0 SCOP 118359 Expressed protein At2g23090/F21P24.15
2 2 2 0 SCOP 109993 VPS9 domain
2 2 2 0 SCOP 116846 MIT domain
2 2 2 0 SCOP 116907 Hook domain
2 2 2 0 SCOP 75632 Cullin homology domain
2 1 1 0 SCOP 56487 SRCR-like
2 2 2 0 SCOP 101233 PWI domain
2 2 2 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
2 2 2 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
2 2 2 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
2 2 2 0 SCOP 46942 Elongation factor TFIIS domain 2
2 2 2 0 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
2 1 1 0 SCOP 49758 Calpain large subunit, middle domain (domain III)
2 2 2 1 SCOP 89162 Gametocyte protein Pfg27
2 2 2 0 SCOP 140383 BSD domain-like
2 2 2 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
2 2 2 0 SCOP 158230 PRP4-like
1 1 1 0 SCOP 56731 DNA primase core
1 1 1 1 SCOP 53167 Purine and uridine phosphorylases
1 1 1 1 SCOP 53790 Tetrapyrrole methylase
1 1 1 0 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 52141 Uracil-DNA glycosylase-like
1 1 1 1 SCOP 75304 Amidase signature (AS) enzymes
1 1 1 1 SCOP 56420 Peptide deformylase
1 1 1 0 SCOP 54570 Ribosomal protein S19
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 46946 S13-like H2TH domain
1 1 1 0 SCOP 64182 DHH phosphoesterases
1 1 1 0 SCOP 143034 L35p-like
1 1 1 0 SCOP 74731 Ribosomal protein L20
1 1 1 0 SCOP 103657 BAR/IMD domain-like
1 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
1 1 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 1 SCOP 53597 Dihydrofolate reductase-like
1 1 1 1 SCOP 51658 Xylose isomerase-like
1 1 1 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 0 SCOP 47729 IHF-like DNA-binding proteins
1 1 1 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
1 1 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 0 SCOP 48557 L-aspartase-like
1 1 1 0 SCOP 55821 YrdC/RibB
1 1 1 1 SCOP 51283 dUTPase-like
1 1 1 0 SCOP 54862 4Fe-4S ferredoxins
1 1 1 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
1 1 1 0 SCOP 56276 S-adenosylmethionine decarboxylase
1 1 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
1 1 1 0 SCOP 54285 MoaD/ThiS
1 1 1 0 SCOP 82657 BolA-like
1 1 1 0 SCOP 48140 Ribosomal protein L19 (L19e)
1 1 1 0 SCOP 52042 Ribosomal protein L32e
1 1 1 0 SCOP 50475 FMN-binding split barrel
1 1 1 0 SCOP 63829 Calcium-dependent phosphotriesterase
1 1 1 1 SCOP 141678 MAL13P1.257-like
1 1 1 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
1 1 1 0 SCOP 54575 Ribosomal protein L31e
1 1 1 0 SCOP 69500 DTD-like
1 1 1 1 SCOP 102886 Coproporphyrinogen III oxidase
1 1 1 1 SCOP 51726 UROD/MetE-like
1 1 1 0 SCOP 142897 TFB5-like
1 1 1 0 SCOP 103456 Preprotein translocase SecE subunit
1 1 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
1 1 1 0 SCOP 53328 Formyltransferase
1 1 1 0 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 53649 Alkaline phosphatase-like
1 1 1 1 SCOP 56322 ADC synthase
1 1 1 0 SCOP 52499 Isochorismatase-like hydrolases
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 0 SCOP 81514 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 55144 LigT-like
1 1 1 0 SCOP 55248 PCD-like
1 1 1 0 SCOP 144210 Nop10-like SnoRNP
1 1 1 0 SCOP 89895 FYSH domain
1 1 1 0 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
1 1 1 0 SCOP 81508 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 48662 Ribosomal protein L39e
1 1 1 0 SCOP 51126 Pectin lyase-like
1 1 1 1 SCOP 118203 Vacuolar ATP synthase subunit C
1 1 1 0 SCOP 161219 CHY zinc finger-like
1 1 1 0 SCOP 47072 Cysteine alpha-hairpin motif
1 1 1 0 SCOP 82282 Homocysteine S-methyltransferase
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 0 SCOP 143870 PF0523-like
1 1 1 1 SCOP 64153 YjeF N-terminal domain-like
1 1 1 0 SCOP 56399 ADP-ribosylation
1 1 1 0 SCOP 58113 Apolipoprotein A-I
1 1 1 0 SCOP 55770 Profilin (actin-binding protein)
1 1 1 0 SCOP 46924 RNA polymerase subunit RPB10
1 1 1 0 SCOP 69618 HemD-like
1 1 1 0 SCOP 143447 AMMECR1-like
1 1 1 0 SCOP 48690 Epsilon subunit of mitochondrial F1F0-ATP synthase
1 1 1 1 SCOP 55909 Pentein
1 1 1 0 SCOP 63562 RPB6/omega subunit-like
1 1 1 1 SCOP 53800 Chelatase
1 1 1 0 SCOP 101960 Stabilizer of iron transporter SufD
1 1 1 1 SCOP 101546 ASF1-like
1 1 1 0 SCOP 51069 Carbonic anhydrase
1 1 1 1 SCOP 102405 MCP/YpsA-like
1 1 1 1 SCOP 51717 Dihydropteroate synthetase-like
1 1 1 1 SCOP 53795 PEP carboxykinase-like
1 1 1 0 SCOP 103642 Sec-C motif
1 1 1 1 SCOP 51998 PFL-like glycyl radical enzymes
1 1 1 0 SCOP 102712 JAB1/MPN domain
1 1 1 0 SCOP 55724 Mog1p/PsbP-like
1 1 1 1 SCOP 52016 LeuD/IlvD-like
1 1 1 0 SCOP 55331 Tautomerase/MIF
1 1 1 0 SCOP 47413 lambda repressor-like DNA-binding domains
1 1 1 0 SCOP 82771 GIY-YIG endonuclease
1 1 1 0 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 0 SCOP 49503 Cupredoxins
1 1 1 0 SCOP 101744 Rof/RNase P subunit-like
1 1 1 0 SCOP 54447 ssDNA-binding transcriptional regulator domain
1 1 1 0 SCOP 89550 PHP domain-like
1 1 1 0 SCOP 55797 PR-1-like
1 1 1 0 SCOP 143990 YbiA-like
1 1 1 0 SCOP 55154 CYTH-like phosphatases
1 1 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 1 0 SCOP 161111 Cation efflux protein transmembrane domain-like
1 1 1 1 SCOP 54913 GlnB-like
1 1 1 1 SCOP 53732 Aconitase iron-sulfur domain
1 1 1 0 SCOP 54518 Tubby C-terminal domain-like
1 1 1 0 SCOP 82153 FAS1 domain
1 1 1 0 SCOP 54975 Acylphosphatase/BLUF domain-like
1 1 1 0 SCOP 158997 Trm112p-like
1 1 1 0 SCOP 51391 Thiamin phosphate synthase
1 1 1 0 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
1 1 1 0 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
1 1 1 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
1 1 1 0 SCOP 89095 GatB/YqeY motif
1 1 1 0 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
1 1 1 0 SCOP 55826 YbaK/ProRS associated domain
1 1 1 0 SCOP 102588 LmbE-like
1 1 1 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
1 1 1 0 SCOP 56747 Prim-pol domain
1 1 1 0 SCOP 52335 Methylglyoxal synthase-like
1 1 1 0 SCOP 111384 OmpH-like
1 1 1 0 SCOP 50814 Lipocalins
1 1 1 0 SCOP 69786 YggU-like
1 1 1 0 SCOP 140319 IscX-like
1 1 1 1 SCOP 51604 Enolase C-terminal domain-like
1 1 1 0 SCOP 50939 Sialidases
1 1 1 0 SCOP 46950 Double-stranded DNA-binding domain
1 1 1 0 SCOP 111321 AF1104-like
1 1 1 0 SCOP 69819 MTH1598-like
1 1 1 1 SCOP 55287 RPB5-like RNA polymerase subunit
1 1 1 0 SCOP 143437 THUMP domain-like
1 1 1 0 SCOP 116820 Rps17e-like
1 1 1 0 SCOP 160374 RplX-like
1 1 1 0 SCOP 69695 SRP19
1 1 1 0 SCOP 53092 Creatinase/prolidase N-terminal domain
1 1 1 0 SCOP 46589 tRNA-binding arm
1 1 1 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
1 1 1 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
1 1 1 0 SCOP 56712 Prokaryotic type I DNA topoisomerase
1 1 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
1 1 1 1 SCOP 51246 Rudiment single hybrid motif
1 1 1 0 SCOP 69318 Integrin alpha N-terminal domain
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 141255 YccV-like
1 1 1 0 SCOP 63825 YWTD domain
1 1 1 0 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
1 1 1 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 52129 Caspase-like
1 1 1 0 SCOP 90257 Myosin rod fragments
1 1 1 0 SCOP 144206 NOB1 zinc finger-like
1 1 1 0 SCOP 158745 LanC-like
1 1 1 0 SCOP 141066 ICP-like
1 1 1 1 SCOP 68923 PEP carboxykinase N-terminal domain
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 0 SCOP 56037 PheT/TilS domain
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
1 1 1 0 SCOP 81464 Cytochrome c oxidase subunit II-like, transmembrane region
1 1 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
1 1 1 0 SCOP 50621 Alanine racemase C-terminal domain-like
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 110111 Ctag/Cox11
1 1 1 1 SCOP 110019 ERO1-like
1 1 1 0 SCOP 81383 F-box domain
1 1 1 0 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 1 SCOP 54826 Enolase N-terminal domain-like
1 1 1 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
1 1 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
1 1 1 0 SCOP 81891 Poly A polymerase C-terminal region-like
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
1 1 1 0 SCOP 101904 GyrA/ParC C-terminal domain-like
1 1 1 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
1 1 1 0 SCOP 55326 PurM N-terminal domain-like
1 1 1 0 SCOP 49354 PapD-like
1 1 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
1 1 1 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 1 SCOP 81837 BEACH domain
1 1 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
1 1 1 0 SCOP 55904 Ornithine decarboxylase C-terminal domain
1 1 1 1 SCOP 47446 Signal peptide-binding domain
1 1 1 0 SCOP 116742 eIF2alpha middle domain-like
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 0 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 0 SCOP 48350 GTPase activation domain, GAP
1 1 1 0 SCOP 49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
1 1 1 1 SCOP 89817 Mago nashi protein
1 1 1 0 SCOP 46774 ARID-like
1 1 1 0 SCOP 82109 MIR domain
1 1 1 1 SCOP 63570 PABC (PABP) domain
1 1 1 0 SCOP 47938 Functional domain of the splicing factor Prp18
1 1 1 0 SCOP 89837 Doublecortin (DC)
1 1 1 0 SCOP 57924 Inhibitor of apoptosis (IAP) repeat
1 1 1 1 SCOP 140984 PTPA-like
1 1 1 0 SCOP 57440 Kringle-like
1 1 1 0 SCOP 110004 Glycolipid transfer protein, GLTP
1 1 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
1 1 1 0 SCOP 57535 Complement control module/SCR domain
1 1 1 0 SCOP 48425 Sec7 domain
1 1 1 0 SCOP 140102 ISY1 domain-like
1 1 1 0 SCOP 81531 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 1 SCOP 47216 Proteasome activator
1 1 1 0 SCOP 143875 ERH-like
1 1 1 0 SCOP 57756 Retrovirus zinc finger-like domains
1 1 1 0 SCOP 57586 TNF receptor-like
1 1 1 0 SCOP 54368 Glutamine synthetase, N-terminal domain
1 1 1 0 SCOP 143791 DUSP-like
1 1 1 0 SCOP 54529 Mitochondrial glycoprotein MAM33-like
1 1 1 0 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
1 1 1 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
1 1 1 0 SCOP 110993 eIF-2-alpha, C-terminal domain
1 1 1 1 SCOP 89942 eEF1-gamma domain
1 1 1 0 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
1 1 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 0 SCOP 160527 V-type ATPase subunit E-like
1 1 1 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
1 1 1 1 SCOP 50989 Clathrin heavy-chain terminal domain
1 1 1 1 SCOP 81382 Skp1 dimerisation domain-like
1 1 1 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
1 1 1 0 SCOP 101931 Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain
1 1 1 1 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
1 1 1 0 SCOP 88802 Pre-PUA domain
1 1 1 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
1 1 1 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
1 1 1 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
1 1 1 0 SCOP 140612 EB1 dimerisation domain-like
1 1 1 0 SCOP 160897 Taf5 N-terminal domain-like
1 1 1 0 SCOP 116878 TrmE connector domain
1 1 1 0 SCOP 64586 C-terminal domain of ProRS
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 140586 Dcp2 domain-like
1 1 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 0 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
1 1 1 0 SCOP 81502 ISP transmembrane anchor
1 1 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 102741 Obg GTP-binding protein C-terminal domain
1 1 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
1 1 1 0 SCOP 101238 XPC-binding domain
1 1 1 1 SCOP 82910 Apical membrane antigen 1

Jump to [ Top of page · Assignment statistics ]


The following superfamilies have one or more weak hits:

SCOP superfamily Troponin coil-coiled subunits
SCOP superfamily Neurotransmitter-gated ion-channel transmembrane pore
SCOP superfamily Hypothetical protein YjiA, C-terminal domain
SCOP superfamily DNA-binding protein Tfx
SCOP superfamily Ribose/Galactose isomerase RpiB/AlsB
SCOP superfamily Sigma2 domain of RNA polymerase sigma factors
SCOP superfamily ssDNA viruses
SCOP superfamily Apolipoprotein A-II
SCOP superfamily Cysteine-rich DNA binding domain, (DM domain)
SCOP superfamily Probable GTPase Der, C-terminal domain
SCOP superfamily DAK1/DegV-like
SCOP superfamily Orange carotenoid protein, N-terminal domain
SCOP superfamily Pre-protein crosslinking domain of SecA
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Bacterial aa3 type cytochrome c oxidase subunit IV
SCOP superfamily Cytochrome c oxidase subunit I-like
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIa
SCOP superfamily Mitochondrial cytochrome c oxidase subunit IV
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily Family A G protein-coupled receptor-like
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Mitotic arrest deficient-like 1, Mad1
SCOP superfamily YebC-like
SCOP superfamily Rotavirus NSP2 fragment, C-terminal domain
SCOP superfamily Hypothetical protein MTH777 (MT0777)
SCOP superfamily YhbC-like, C-terminal domain
SCOP superfamily Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
SCOP superfamily Translin
SCOP superfamily Galactose mutarotase-like
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily Ribosome binding protein Y (YfiA homologue)
SCOP superfamily Integrin beta tail domain
SCOP superfamily Arp2/3 complex subunits
SCOP superfamily Cell wall binding repeat
SCOP superfamily Tricorn protease N-terminal domain
SCOP superfamily Arp2/3 complex 16 kDa subunit ARPC5
SCOP superfamily Glutamyl tRNA-reductase dimerization domain
SCOP superfamily RNase III domain-like
SCOP superfamily Hypothetical protein YjbJ
SCOP superfamily RecG, N-terminal domain
SCOP superfamily Phase 1 flagellin
SCOP superfamily Chorismate lyase-like
SCOP superfamily 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
SCOP superfamily Cell-division inhibitor MinC, N-terminal domain
SCOP superfamily BAG domain
SCOP superfamily Bacterial hemolysins
SCOP superfamily Variant surface glycoprotein (N-terminal domain)
SCOP superfamily Virus ectodomain
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily Rotavirus nonstructural proteins
SCOP superfamily Coiled-coil dimerization domain from cortexillin I
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Assembly domain of cartilage oligomeric matrix protein
SCOP superfamily TB module/8-cys domain
SCOP superfamily Methylamine dehydrogenase, L chain
SCOP superfamily Cystine-knot cytokines
SCOP superfamily Trefoil
SCOP superfamily Plant lectins/antimicrobial peptides
SCOP superfamily Leukocidin-like
SCOP superfamily delta-Endotoxin (insectocide), N-terminal domain
SCOP superfamily Reovirus inner layer core protein p3
SCOP superfamily Serpins
SCOP superfamily Baseplate structural protein gp11
SCOP superfamily Penicillin binding protein dimerisation domain
SCOP superfamily C-type lectin-like
SCOP superfamily Carbon-nitrogen hydrolase
SCOP superfamily Ribonuclease Rh-like
SCOP superfamily Sporulation response regulatory protein Spo0B
SCOP superfamily 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
SCOP superfamily Ribosomal protein L9 C-domain
SCOP superfamily Homing endonucleases
SCOP superfamily Origin of replication-binding domain, RBD-like
SCOP superfamily Frataxin/Nqo15-like
SCOP superfamily RuBisCO, small subunit
SCOP superfamily Probable bacterial effector-binding domain
SCOP superfamily Formylmethanofuran:tetrahydromethanopterin formyltransferase
SCOP superfamily Bacterial exopeptidase dimerisation domain
SCOP superfamily HMA, heavy metal-associated domain
SCOP superfamily Dimeric alpha+beta barrel
SCOP superfamily YcfA/nrd intein domain
SCOP superfamily Microbial ribonucleases
SCOP superfamily "Helical backbone" metal receptor
SCOP superfamily Aspartate/glutamate racemase
SCOP superfamily AraD/HMP-PK domain-like
SCOP superfamily Toll/Interleukin receptor TIR domain
SCOP superfamily SpoIIaa-like
SCOP superfamily Tlp20, baculovirus telokin-like protein
SCOP superfamily Fibre shaft of virus attachment proteins
SCOP superfamily Insect cysteine-rich antifreeze protein
SCOP superfamily delta-Endotoxin (insectocide), middle domain
SCOP superfamily Carbohydrate binding domain
SCOP superfamily Glycosyl hydrolase domain
SCOP superfamily TolB, C-terminal domain
SCOP superfamily Rap30/74 interaction domains
SCOP superfamily Mannose 6-phosphate receptor domain
SCOP superfamily Agglutinin
SCOP superfamily PRC-barrel domain
SCOP superfamily TIMP-like
SCOP superfamily Myosin S1 fragment, N-terminal domain
SCOP superfamily C-terminal domain of transcriptional repressors
SCOP superfamily Baculovirus p35 protein
SCOP superfamily TNF-like
SCOP superfamily ENV polyprotein, receptor-binding domain
SCOP superfamily Starch-binding domain-like
SCOP superfamily Carbohydrate-binding domain
SCOP superfamily CBD9-like
SCOP superfamily Transglutaminase, two C-terminal domains
SCOP superfamily Immunoglobulin
SCOP superfamily Multiheme cytochromes
SCOP superfamily Transducin (heterotrimeric G protein), gamma chain
SCOP superfamily Phospholipase A2, PLA2
SCOP superfamily Nuclear receptor ligand-binding domain
SCOP superfamily gene 59 helicase assembly protein
SCOP superfamily Lipoxigenase
SCOP superfamily Ras GEF
SCOP superfamily A virus capsid protein alpha-helical domain
SCOP superfamily Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
SCOP superfamily Cytochrome P450
SCOP superfamily Seven-hairpin glycosidases
SCOP superfamily Regulator of G-protein signaling, RGS
SCOP superfamily DBL homology domain (DH-domain)
SCOP superfamily FliG
SCOP superfamily GntR ligand-binding domain-like
SCOP superfamily DEATH domain
SCOP superfamily Saposin
SCOP superfamily PAH2 domain
SCOP superfamily CO dehydrogenase ISP C-domain like
SCOP superfamily N-terminal domain of cbl (N-cbl)
SCOP superfamily STAT
SCOP superfamily A DNA-binding domain in eukaryotic transcription factors
SCOP superfamily ROP protein
SCOP superfamily Retrovirus capsid dimerization domain-like
SCOP superfamily Colicin E immunity proteins
SCOP superfamily 4-helical cytokines
SCOP superfamily alpha-catenin/vinculin-like
SCOP superfamily Hemerythrin-like
SCOP superfamily Aspartate receptor, ligand-binding domain
SCOP superfamily Apolipoprotein
SCOP superfamily Diol dehydratase, gamma subunit
SCOP superfamily Fertilization protein
SCOP superfamily Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
SCOP superfamily Spectrin repeat
SCOP superfamily C-terminal UvrC-binding domain of UvrB
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily Zinc hairpin stack
SCOP superfamily MetI-like
SCOP superfamily Photosystem II reaction center protein M, PsbM
SCOP superfamily Viral glycoprotein ectodomain-like
SCOP superfamily SSO1389-like
SCOP superfamily Api92-like
SCOP superfamily PG1388-like
SCOP superfamily Lp2179-like
SCOP superfamily YehR-like
SCOP superfamily YNR034W-A-like
SCOP superfamily FLJ32549 C-terminal domain-like
SCOP superfamily SMI1/KNR4-like
SCOP superfamily NMB0513-like
SCOP superfamily PH0987 N-terminal domain-like
SCOP superfamily Bacterial polysaccharide co-polymerase-like
SCOP superfamily Rnp2-like
SCOP superfamily AMPKBI-like
SCOP superfamily FlaG-like
SCOP superfamily PriA/YqbF domain
SCOP superfamily PrpR receptor domain-like
SCOP superfamily XCC0632-like
SCOP superfamily Plus3-like
SCOP superfamily MgtE N-terminal domain-like
SCOP superfamily PSPTO4464-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily RbcX-like
SCOP superfamily Jann4075-like
SCOP superfamily TAFH domain-like
SCOP superfamily FLJ32549 domain-like
SCOP superfamily Bacillus cereus metalloprotein-like
SCOP superfamily HP0062-like
SCOP superfamily YnzC-like
SCOP superfamily Sec2 N-terminal region
SCOP superfamily Heterotrimerisation domain of extracellular hemoglobin linker subunits
SCOP superfamily FdhE-like
SCOP superfamily ORC1-binding domain
SCOP superfamily L,D-transpeptidase pre-catalytic domain-like
SCOP superfamily RGC domain-like
SCOP superfamily CorA soluble domain-like
SCOP superfamily PHP14-like
SCOP superfamily GAS2 domain-like
SCOP superfamily YktB/PF0168-like
SCOP superfamily Nqo1 FMN-binding domain-like
SCOP superfamily FimD N-terminal domain-like
SCOP superfamily RelB-like
SCOP superfamily Glu-tRNAGln amidotransferase C subunit
SCOP superfamily DNA terminal protein
SCOP superfamily TROVE domain-like
SCOP superfamily Rhabdovirus nucleoprotein-like
SCOP superfamily SipA N-terminal domain-like
SCOP superfamily AF0941-like
SCOP superfamily Phage replication organizer domain
SCOP superfamily IpaD-like
SCOP superfamily EF2947-like
SCOP superfamily HP1531-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily YppE-like
SCOP superfamily MxiH-like
SCOP superfamily SPy1572-like
SCOP superfamily Calcyclin-binding protein-like
SCOP superfamily Synuclein
SCOP superfamily Proton glutamate symport protein
SCOP superfamily AF0104/ALDC/Ptd012-like
SCOP superfamily WWE domain
SCOP superfamily YbjQ-like
SCOP superfamily Nucleoporin domain
SCOP superfamily Flagellar hook protein flgE
SCOP superfamily RNA-binding protein She2p
SCOP superfamily EspA/CesA-like
SCOP superfamily XseB-like
SCOP superfamily Fzo-like conserved region
SCOP superfamily Geminin coiled-coil domain
SCOP superfamily QueA-like
SCOP superfamily Urocanase
SCOP superfamily Hypothetical protein yfbM
SCOP superfamily Peptidylarginine deiminase Pad4, middle domain
SCOP superfamily Her-1
SCOP superfamily Hypothetical protein MG354
SCOP superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
SCOP superfamily DinB/YfiT-like putative metalloenzymes
SCOP superfamily Cag-Z
SCOP superfamily PhoU-like
SCOP superfamily Alpha-hemoglobin stabilizing protein AHSP
SCOP superfamily DEK C-terminal domain
SCOP superfamily DnaK suppressor protein DksA, alpha-hairpin domain
SCOP superfamily SBT domain
SCOP superfamily Plexin repeat
SCOP superfamily Major capsid protein VP5
SCOP superfamily NinB
SCOP superfamily TT1751-like
SCOP superfamily Ta1353-like
SCOP superfamily CheC-like
SCOP superfamily Hypothetical protein YwqG
SCOP superfamily Hypothetical protein TT1725
SCOP superfamily mRNA decapping enzyme DcpS N-terminal domain
SCOP superfamily NIF3 (NGG1p interacting factor 3)-like
SCOP superfamily Alpha-2,3/8-sialyltransferase CstII
SCOP superfamily Supernatant protein factor (SPF), C-terminal domain
SCOP superfamily Hypothetical protein ST1625
SCOP superfamily C-terminal domain of Ku80
SCOP superfamily Superantigen MAM
SCOP superfamily YcfC-like
SCOP superfamily Oxygen-evolving enhancer protein 3,
SCOP superfamily Staphylocoagulase
SCOP superfamily Typo IV secretion system protein TraC
SCOP superfamily SPOC domain-like
SCOP superfamily Kazal-type serine protease inhibitors
SCOP superfamily Lesion bypass DNA polymerase (Y-family), little finger domain

Jump to [ Top of page · Assignment statistics ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.