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Home > Genomes > Superfamily assignments for Drosophila melanogaster 58 (pseudogenes)

Drosophila melanogaster 58 (pseudogenes) superfamily assignments

Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Ecdysozoa; Panarthropoda; Arthropoda; Mandibulata; Pancrustacea; Hexapoda; Insecta; Dicondylia; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Eremoneura; Cyclorrhapha; Schizophora; Acalyptratae; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster

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Domain assignments

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Assignment statistics

Sequences:	195	total
	133	(68 %) with assignment
	291	average length
	48	% amino acid coverage
Domains:	195	total
	65	unique superfamilies
	17	unique families
	205	average length
	3	average superfamily size
	67	% formed by duplication
Domain combinations:	18	domain pairs
Domain combinations:	76	unique architectures

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Superfamily assignments

Domains	Proteins	Architectures	Families	SCOP link	Superfamilies
22	3	3	0	SCOP 57716	Glucocorticoid receptor-like (DNA-binding domain)
19	19	3	0	SCOP 68906	SAP domain
10	3	3	0	SCOP 48726	Immunoglobulin
9	9	1	0	SCOP 57798	Casein kinase II beta subunit
9	3	2	0	SCOP 57667	beta-beta-alpha zinc fingers
8	8	2	0	SCOP 53098	Ribonuclease H-like
7	7	1	1	SCOP 47113	Histone-fold
7	5	4	3	SCOP 52540	P-loop containing nucleoside triphosphate hydrolases
7	3	2	0	SCOP 81296	E set domains
7	7	1	0	SCOP 47781	RuvA domain 2-like
6	6	2	1	SCOP 48264	Cytochrome P450
4	4	1	0	SCOP 56672	DNA/RNA polymerases
4	4	4	0	SCOP 56112	Protein kinase-like (PK-like)
3	3	3	0	SCOP 50494	Trypsin-like serine proteases
3	3	2	0	SCOP 55797	PR-1-like
3	3	3	0	SCOP 53822	Periplasmic binding protein-like I
3	3	1	0	SCOP 54928	RNA-binding domain, RBD
3	2	2	0	SCOP 48452	TPR-like
3	3	2	0	SCOP 56436	C-type lectin-like
3	3	2	0	SCOP 48350	GTPase activation domain, GAP
3	3	2	0	SCOP 53474	alpha/beta-Hydrolases
2	2	2	1	SCOP 55073	Nucleotide cyclase
2	1	1	0	SCOP 49493	HSP40/DnaJ peptide-binding domain
2	2	1	0	SCOP 57362	BPTI-like
2	2	1	0	SCOP 52129	Caspase-like
2	1	1	0	SCOP 90123	ABC transporter transmembrane region
2	2	2	0	SCOP 46785	"Winged helix" DNA-binding domain
2	2	1	0	SCOP 56059	Glutathione synthetase ATP-binding domain-like
2	2	1	0	SCOP 161070	SNF-like
1	1	1	0	SCOP 54768	dsRNA-binding domain-like
1	1	1	0	SCOP 81660	Metal cation-transporting ATPase, ATP-binding domain N
1	1	1	0	SCOP 52218	Flavoproteins
1	1	1	0	SCOP 48403	Ankyrin repeat
1	1	1	0	SCOP 81464	Cytochrome c oxidase subunit II-like, transmembrane region
1	1	1	0	SCOP 103473	MFS general substrate transporter
1	1	1	0	SCOP 81665	Calcium ATPase, transmembrane domain M
1	1	1	1	SCOP 56496	Fibrinogen C-terminal domain-like
1	1	1	0	SCOP 57625	Invertebrate chitin-binding proteins
1	1	1	0	SCOP 57184	Growth factor receptor domain
1	1	1	0	SCOP 48652	Tetraspanin
1	1	1	0	SCOP 56784	HAD-like
1	1	1	0	SCOP 49410	Alpha-macroglobulin receptor domain
1	1	1	0	SCOP 100895	Kazal-type serine protease inhibitors
1	1	1	1	SCOP 53448	Nucleotide-diphospho-sugar transferases
1	1	1	1	SCOP 48097	Regulator of G-protein signaling, RGS
1	1	1	0	SCOP 54211	Ribosomal protein S5 domain 2-like
1	1	1	0	SCOP 57903	FYVE/PHD zinc finger
1	1	1	0	SCOP 47819	HRDC-like
1	1	1	1	SCOP 81442	Cytochrome c oxidase subunit I-like
1	1	1	1	SCOP 81342	Transmembrane di-heme cytochromes
1	1	1	1	SCOP 81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1	1	1	1	SCOP 161084	MAPEG domain-like
1	1	1	0	SCOP 54001	Cysteine proteinases
1	1	1	1	SCOP 51430	NAD(P)-linked oxidoreductase
1	1	1	1	SCOP 49503	Cupredoxins
1	1	1	0	SCOP 56104	SAICAR synthase-like
1	1	1	0	SCOP 51206	cAMP-binding domain-like
1	1	1	0	SCOP 53187	Zn-dependent exopeptidases
1	1	1	0	SCOP 50242	TIMP-like
1	1	1	1	SCOP 48239	Terpenoid cyclases/Protein prenyltransferases
1	1	1	1	SCOP 81452	Cytochrome c oxidase subunit III-like
1	1	1	0	SCOP 46689	Homeodomain-like
1	1	1	0	SCOP 53756	UDP-Glycosyltransferase/glycogen phosphorylase
1	1	1	0	SCOP 81336	F1F0 ATP synthase subunit A
1	1	1	0	SCOP 81653	Calcium ATPase, transduction domain A