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  Home > Genomes > Superfamily assignments for Populus trichocarpa v156


Populus trichocarpa v156 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus; Populus trichocarpa

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 45033 total
26591 (59 %) with assignment
383 average length
44 % amino acid coverage
Domains: 37760 total
974 unique superfamilies
814 unique families
286 average length
38.8 average superfamily size
97 % formed by duplication
Domain combinations: 994 domain pairs
3703 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
2257 1990 301 11 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
2221 2209 159 4 SCOP 56112 Protein kinase-like (PK-like)
1755 1357 205 2 SCOP 52058 L domain-like
867 802 97 3 SCOP 57850 RING/U-box
690 645 38 2 SCOP 46689 Homeodomain-like
682 553 96 10 SCOP 48371 ARM repeat
661 656 50 8 SCOP 51735 NAD(P)-binding Rossmann-fold domains
629 454 60 1 SCOP 54928 RNA-binding domain, RBD
565 442 68 2 SCOP 48452 TPR-like
537 536 19 9 SCOP 53474 alpha/beta-Hydrolases
499 437 111 0 SCOP 52047 RNI-like
467 461 8 1 SCOP 48264 Cytochrome P450
431 403 67 1 SCOP 50978 WD40 repeat-like
416 372 27 17 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
408 350 38 4 SCOP 52833 Thioredoxin-like
407 402 9 5 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
377 373 40 8 SCOP 51445 (Trans)glycosidases
374 374 47 0 SCOP 81383 F-box domain
336 330 8 0 SCOP 103473 MFS general substrate transporter
332 170 10 2 SCOP 49503 Cupredoxins
306 285 31 1 SCOP 47473 EF-hand
305 212 43 4 SCOP 54236 Ubiquitin-like
297 290 71 4 SCOP 46785 "Winged helix" DNA-binding domain
291 290 33 4 SCOP 53098 Ribonuclease H-like
290 261 25 0 SCOP 51110 alpha-D-mannose-specific plant lectins
269 239 11 1 SCOP 54171 DNA-binding domain
268 203 27 0 SCOP 57667 beta-beta-alpha zinc fingers
262 249 42 1 SCOP 48403 Ankyrin repeat
249 248 42 8 SCOP 56784 HAD-like
243 243 7 0 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
242 152 28 1 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
233 231 13 2 SCOP 51197 Clavaminate synthase-like
223 186 35 5 SCOP 51905 FAD/NAD(P)-binding domain
219 89 26 1 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
217 217 6 3 SCOP 51126 Pectin lyase-like
212 195 15 1 SCOP 101936 DNA-binding pseudobarrel domain
207 204 14 5 SCOP 53448 Nucleotide-diphospho-sugar transferases
199 155 53 5 SCOP 50249 Nucleic acid-binding proteins
188 182 58 0 SCOP 52200 Toll/Interleukin receptor TIR domain
185 184 25 1 SCOP 46565 Chaperone J-domain
184 184 5 1 SCOP 101941 NAC domain
181 128 10 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
176 148 46 1 SCOP 57903 FYVE/PHD zinc finger
170 141 16 0 SCOP 55008 HMA, heavy metal-associated domain
168 89 22 4 SCOP 53067 Actin-like ATPase domain
168 168 26 9 SCOP 54001 Cysteine proteinases
166 160 12 5 SCOP 53383 PLP-dependent transferases
160 160 8 1 SCOP 81606 PP2C-like
160 139 18 1 SCOP 55961 Bet v1-like
157 157 17 3 SCOP 49899 Concanavalin A-like lectins/glucanases
153 96 10 1 SCOP 47954 Cyclin-like
147 86 17 1 SCOP 90123 ABC transporter transmembrane region
146 78 24 1 SCOP 55021 ACT-like
145 117 9 1 SCOP 118290 WRKY DNA-binding domain
141 139 3 1 SCOP 48113 Heme-dependent peroxidases
140 98 12 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
139 139 13 0 SCOP 54277 CAD & PB1 domains
138 110 30 0 SCOP 57756 Retrovirus zinc finger-like domains
135 79 6 2 SCOP 53901 Thiolase-like
132 104 9 1 SCOP 50129 GroES-like
132 54 27 0 SCOP 57889 Cysteine-rich domain
131 127 28 1 SCOP 54695 POZ domain
131 63 28 0 SCOP 90229 CCCH zinc finger
130 116 22 0 SCOP 81901 HCP-like
127 126 7 2 SCOP 47113 Histone-fold
121 118 5 1 SCOP 101148 Plant invertase/pectin methylesterase inhibitor
120 120 4 1 SCOP 52266 SGNH hydrolase
118 115 7 6 SCOP 51182 RmlC-like cupins
113 113 5 0 SCOP 47699 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
112 112 7 1 SCOP 50630 Acid proteases
111 88 10 3 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
110 109 10 4 SCOP 56300 Metallo-dependent phosphatases
109 109 13 1 SCOP 47616 GST C-terminal domain-like
105 102 9 3 SCOP 48576 Terpenoid synthases
104 104 5 1 SCOP 103506 Mitochondrial carrier
104 104 9 2 SCOP 54495 UBC-like
102 97 41 8 SCOP 54211 Ribosomal protein S5 domain 2-like
100 100 8 2 SCOP 56176 FAD-binding/transporter-associated domain-like
100 100 4 0 SCOP 55455 SRF-like
100 100 3 0 SCOP 57959 Leucine zipper domain
99 99 17 3 SCOP 52402 Adenine nucleotide alpha hydrolases-like
99 90 13 1 SCOP 52172 CheY-like
96 73 22 3 SCOP 49785 Galactose-binding domain-like
96 96 31 3 SCOP 50729 PH domain-like
95 95 6 3 SCOP 49764 HSP20-like chaperones
94 77 28 0 SCOP 46934 UBA-like
92 92 11 1 SCOP 52743 Subtilisin-like
92 92 19 1 SCOP 81665 Calcium ATPase, transmembrane domain M
92 63 15 1 SCOP 49599 TRAF domain-like
89 89 18 1 SCOP 81653 Calcium ATPase, transduction domain A
85 85 7 1 SCOP 56801 Acetyl-CoA synthetase-like
84 79 15 1 SCOP 117281 Kelch motif
83 81 15 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
79 61 9 0 SCOP 82153 FAS1 domain
76 70 12 4 SCOP 52096 ClpP/crotonase
76 76 20 2 SCOP 82199 SET domain
74 74 14 1 SCOP 53850 Periplasmic binding protein-like II
74 73 23 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
74 38 12 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
72 69 24 3 SCOP 81296 E set domains
72 67 23 2 SCOP 50447 Translation proteins
72 56 16 0 SCOP 54631 CBS-domain pair
71 37 15 0 SCOP 90209 Ran binding protein zinc finger-like
70 70 5 2 SCOP 48208 Six-hairpin glycosidases
69 69 5 2 SCOP 50685 Barwin-like endoglucanases
69 69 11 4 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
68 55 16 0 SCOP 81324 Voltage-gated potassium channels
68 68 7 0 SCOP 53822 Periplasmic binding protein-like I
68 63 8 1 SCOP 74788 Cullin repeat-like
67 67 6 2 SCOP 55811 Nudix
67 47 22 0 SCOP 54768 dsRNA-binding domain-like
65 26 8 2 SCOP 55753 Actin depolymerizing proteins
64 42 10 6 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
62 62 2 1 SCOP 81338 Aquaporin-like
62 34 8 1 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
61 61 5 1 SCOP 103511 Chlorophyll a-b binding protein
60 56 13 0 SCOP 58038 SNARE fusion complex
60 48 9 1 SCOP 54534 FKBP-like
59 59 11 4 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
58 58 19 1 SCOP 53300 vWA-like
58 53 13 2 SCOP 56219 DNase I-like
58 57 13 1 SCOP 52087 CRAL/TRIO domain
57 52 18 4 SCOP 52374 Nucleotidylyl transferase
57 57 8 3 SCOP 64356 SNARE-like
57 57 16 3 SCOP 56672 DNA/RNA polymerases
57 51 17 3 SCOP 52799 (Phosphotyrosine protein) phosphatases II
56 42 16 0 SCOP 50985 RCC1/BLIP-II
56 56 8 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
56 56 8 1 SCOP 48464 ENTH/VHS domain
55 55 10 1 SCOP 54427 NTF2-like
55 54 13 3 SCOP 74650 Galactose mutarotase-like
54 54 5 1 SCOP 50182 Sm-like ribonucleoproteins
54 54 6 1 SCOP 49870 Osmotin, thaumatin-like protein
52 35 6 3 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
51 51 9 1 SCOP 50891 Cyclophilin-like
51 51 7 2 SCOP 52151 FabD/lysophospholipase-like
51 51 10 0 SCOP 46938 CRAL/TRIO N-terminal domain
51 51 14 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
49 49 22 2 SCOP 55681 Class II aaRS and biotin synthetases
49 49 4 2 SCOP 54518 Tubby C-terminal domain-like
49 49 19 4 SCOP 88697 PUA domain-like
48 45 19 4 SCOP 56059 Glutathione synthetase ATP-binding domain-like
48 47 6 2 SCOP 53254 Phosphoglycerate mutase-like
47 31 19 0 SCOP 52113 BRCT domain
47 47 12 1 SCOP 47370 Bromodomain
46 46 11 0 SCOP 50965 Galactose oxidase, central domain
46 44 14 3 SCOP 63380 Riboflavin synthase domain-like
46 46 12 4 SCOP 54373 FAD-linked reductases, C-terminal domain
45 43 9 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
45 40 11 3 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
44 24 12 1 SCOP 56024 Phospholipase D/nuclease
43 43 2 1 SCOP 51430 NAD(P)-linked oxidoreductase
43 43 16 3 SCOP 81301 Nucleotidyltransferase
43 43 2 0 SCOP 117856 AF0104/ALDC/Ptd012-like
43 42 13 1 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
43 42 10 0 SCOP 63748 Tudor/PWWP/MBT
42 42 8 7 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
42 23 4 2 SCOP 51726 UROD/MetE-like
42 39 19 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
42 41 9 1 SCOP 52777 CoA-dependent acyltransferases
41 35 14 2 SCOP 52317 Class I glutamine amidotransferase-like
41 40 12 4 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
41 41 5 1 SCOP 49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
40 40 13 4 SCOP 53187 Zn-dependent exopeptidases
40 39 9 1 SCOP 51206 cAMP-binding domain-like
40 40 14 2 SCOP 52029 GroEL apical domain-like
39 39 6 5 SCOP 51569 Aldolase
39 38 10 1 SCOP 50104 Translation proteins SH3-like domain
39 39 6 1 SCOP 52490 Tubulin nucleotide-binding domain-like
39 34 13 0 SCOP 50156 PDZ domain-like
39 39 5 1 SCOP 47661 t-snare proteins
39 39 1 1 SCOP 49590 PHL pollen allergen
38 34 8 1 SCOP 47095 HMG-box
38 38 4 1 SCOP 55307 Tubulin C-terminal domain-like
37 33 9 3 SCOP 51161 Trimeric LpxA-like enzymes
37 36 12 1 SCOP 48592 GroEL equatorial domain-like
37 36 11 1 SCOP 51011 Glycosyl hydrolase domain
37 33 9 0 SCOP 54849 GroEL-intermediate domain like
36 29 11 0 SCOP 57997 Tropomyosin
36 35 8 1 SCOP 51230 Single hybrid motif
36 36 8 1 SCOP 52025 PA domain
35 31 7 2 SCOP 51695 PLC-like phosphodiesterases
35 35 4 2 SCOP 53720 ALDH-like
35 31 12 1 SCOP 50494 Trypsin-like serine proteases
35 35 6 1 SCOP 103612 SBT domain
35 35 4 0 SCOP 89009 GAT-like domain
34 34 11 1 SCOP 56399 ADP-ribosylation
34 12 4 1 SCOP 63411 LuxS/MPP-like metallohydrolase
34 34 1 1 SCOP 141562 At5g01610-like
33 33 5 3 SCOP 53613 Ribokinase-like
33 33 6 2 SCOP 53137 Translational machinery components
33 33 6 1 SCOP 54292 2Fe-2S ferredoxin-like
33 33 10 1 SCOP 49879 SMAD/FHA domain
32 32 6 1 SCOP 51395 FMN-linked oxidoreductases
32 32 7 2 SCOP 55315 L30e-like
32 30 7 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
32 18 12 1 SCOP 55785 PYP-like sensor domain (PAS domain)
32 32 10 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
31 31 4 0 SCOP 57829 Zn-binding ribosomal proteins
31 26 17 1 SCOP 47592 SWIB/MDM2 domain
31 31 9 0 SCOP 81923 Double Clp-N motif
31 22 11 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
31 22 13 0 SCOP 54160 Chromo domain-like
31 31 1 1 SCOP 50386 STI-like
30 26 7 2 SCOP 53271 PRTase-like
30 30 3 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
30 30 4 3 SCOP 48150 DNA-glycosylase
30 26 7 2 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
30 27 11 0 SCOP 49452 Starch-binding domain-like
30 18 12 1 SCOP 54980 EF-G C-terminal domain-like
30 30 6 3 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
30 30 9 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
30 24 10 0 SCOP 51045 WW domain
29 29 7 0 SCOP 144091 Rhomboid-like
29 29 1 1 SCOP 111352 Ammonium transporter
29 27 5 1 SCOP 53955 Lysozyme-like
29 16 6 0 SCOP 75471 YhbY-like
29 19 6 0 SCOP 109905 Surp module (SWAP domain)
28 27 6 2 SCOP 52821 Rhodanese/Cell cycle control phosphatase
28 28 5 0 SCOP 50800 PK beta-barrel domain-like
28 28 8 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
28 28 3 1 SCOP 49363 Purple acid phosphatase, N-terminal domain
28 14 8 0 SCOP 47762 PAH2 domain
27 27 6 3 SCOP 55120 Pseudouridine synthase
27 27 5 1 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
27 27 4 2 SCOP 47240 Ferritin-like
27 27 6 3 SCOP 100950 NagB/RpiA/CoA transferase-like
27 27 2 1 SCOP 53056 beta-carbonic anhydrase, cab
27 9 1 1 SCOP 55973 S-adenosylmethionine synthetase
27 25 6 1 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
26 22 5 2 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
26 25 3 1 SCOP 117070 LEA14-like
26 26 5 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
26 20 9 0 SCOP 54106 LysM domain
26 26 3 1 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
26 26 7 0 SCOP 49354 PapD-like
26 26 12 0 SCOP 140996 Hermes dimerisation domain
25 25 4 5 SCOP 51366 Ribulose-phoshate binding barrel
25 25 6 1 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
25 25 3 0 SCOP 52935 PK C-terminal domain-like
24 24 2 1 SCOP 56655 Carbohydrate phosphatase
24 24 3 1 SCOP 48484 Lipoxigenase
24 14 6 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
24 24 1 0 SCOP 54654 CI-2 family of serine protease inhibitors
24 21 9 1 SCOP 52440 PreATP-grasp domain
24 24 5 1 SCOP 140990 FtsH protease domain-like
24 24 8 0 SCOP 57863 ArfGap/RecO-like zinc finger
24 24 2 1 SCOP 56327 LDH C-terminal domain-like
24 24 12 0 SCOP 144232 HIT/MYND zinc finger-like
24 21 5 0 SCOP 118310 AN1-like Zinc finger
24 8 5 1 SCOP 53738 Phosphoglucomutase, first 3 domains
24 24 5 0 SCOP 57016 Plant lectins/antimicrobial peptides
23 21 8 2 SCOP 53927 Cytidine deaminase-like
23 23 3 1 SCOP 75304 Amidase signature (AS) enzymes
23 23 11 1 SCOP 55920 Creatinase/aminopeptidase
23 23 4 2 SCOP 52768 Arginase/deacetylase
23 23 4 1 SCOP 102405 MCP/YpsA-like
23 23 5 0 SCOP 161111 Cation efflux protein transmembrane domain-like
23 23 6 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
22 22 5 2 SCOP 102114 Radical SAM enzymes
22 22 10 2 SCOP 56104 SAICAR synthase-like
22 22 9 2 SCOP 109604 HD-domain/PDEase-like
22 22 8 1 SCOP 47576 Calponin-homology domain, CH-domain
22 22 2 1 SCOP 55724 Mog1p/PsbP-like
22 20 7 0 SCOP 57783 Zinc beta-ribbon
22 16 6 1 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
22 22 7 1 SCOP 50022 ISP domain
22 15 3 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
22 5 4 0 SCOP 81698 FF domain
21 21 5 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
21 21 7 2 SCOP 52218 Flavoproteins
21 21 2 1 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
21 21 9 0 SCOP 81995 beta-sandwich domain of Sec23/24
20 20 5 1 SCOP 50475 FMN-binding split barrel
20 20 7 2 SCOP 55931 Glutamine synthetase/guanido kinase
20 20 8 1 SCOP 52954 Class II aaRS ABD-related
20 19 3 1 SCOP 55797 PR-1-like
20 13 10 0 SCOP 69065 RNase III domain-like
20 20 10 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
20 11 6 1 SCOP 51101 Mannose-binding lectins
20 20 4 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
20 20 2 1 SCOP 48445 14-3-3 protein
20 20 3 0 SCOP 47769 SAM/Pointed domain
20 18 8 0 SCOP 55666 Ribonuclease PH domain 2-like
20 10 3 1 SCOP 54416 Amine oxidase N-terminal region
19 19 7 6 SCOP 51556 Metallo-dependent hydrolases
19 19 2 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
19 10 3 0 SCOP 81333 F1F0 ATP synthase subunit C
19 13 5 2 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
19 19 8 1 SCOP 81631 PAP/OAS1 substrate-binding domain
19 11 3 1 SCOP 56053 Ribosomal protein L6
19 19 3 0 SCOP 117892 Band 7/SPFH domain
18 18 8 0 SCOP 103657 BAR/IMD domain-like
18 18 2 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
18 18 5 0 SCOP 63829 Calcium-dependent phosphotriesterase
18 18 2 0 SCOP 51306 LexA/Signal peptidase
18 14 6 1 SCOP 55781 GAF domain-like
18 18 6 1 SCOP 48019 post-AAA+ oligomerization domain-like
18 18 3 0 SCOP 47090 PGBD-like
18 18 4 1 SCOP 55060 GHMP Kinase, C-terminal domain
18 18 3 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
18 18 5 1 SCOP 101690 PAZ domain
18 16 3 0 SCOP 140383 BSD domain-like
17 17 5 0 SCOP 47336 ACP-like
17 17 6 0 SCOP 55174 Alpha-L RNA-binding motif
17 17 7 2 SCOP 53633 Carbamate kinase-like
17 17 8 1 SCOP 54862 4Fe-4S ferredoxins
17 17 4 1 SCOP 144000 Oxysterol-binding protein-like
17 17 4 1 SCOP 55159 eIF1-like
17 17 2 0 SCOP 52091 SpoIIaa-like
17 14 3 1 SCOP 54909 Dimeric alpha+beta barrel
17 17 6 4 SCOP 52467 DHS-like NAD/FAD-binding domain
17 17 9 0 SCOP 82171 DPP6 N-terminal domain-like
17 17 8 2 SCOP 51246 Rudiment single hybrid motif
17 14 6 1 SCOP 50370 Ricin B-like lectins
17 17 7 1 SCOP 56204 Hect, E3 ligase catalytic domain
16 16 2 0 SCOP 53167 Purine and uridine phosphorylases
16 16 3 1 SCOP 53784 Phosphofructokinase
16 16 8 1 SCOP 88723 PIN domain-like
16 16 7 1 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
16 9 2 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
16 16 3 2 SCOP 52922 TK C-terminal domain-like
16 16 10 0 SCOP 68906 SAP domain
16 16 8 0 SCOP 55277 GYF domain
15 13 6 2 SCOP 54197 HIT-like
15 15 2 2 SCOP 51316 Mss4-like
15 15 3 0 SCOP 46579 Prefoldin
15 13 5 1 SCOP 81340 Clc chloride channel
15 15 5 1 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
15 14 6 1 SCOP 75005 Arabinanase/levansucrase/invertase
15 11 2 1 SCOP 54403 Cystatin/monellin
15 15 3 1 SCOP 48056 Di-copper centre-containing domain
15 8 2 1 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
15 15 5 0 SCOP 48350 GTPase activation domain, GAP
15 15 1 1 SCOP 47874 Annexin
15 15 5 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
15 15 3 1 SCOP 81382 Skp1 dimerisation domain-like
15 15 5 1 SCOP 81811 Helical domain of Sec23/24
14 14 7 2 SCOP 75217 alpha/beta knot
14 14 2 0 SCOP 55129 Ribosomal protein L30p/L7e
14 14 3 1 SCOP 56634 Heme-dependent catalase-like
14 14 4 1 SCOP 53649 Alkaline phosphatase-like
14 14 3 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
14 14 4 1 SCOP 49329 Cu,Zn superoxide dismutase-like
14 14 2 0 SCOP 55331 Tautomerase/MIF
14 14 7 1 SCOP 50993 Peptidase/esterase 'gauge' domain
14 14 4 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
14 14 6 2 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
14 14 6 0 SCOP 46774 ARID-like
14 14 4 0 SCOP 82919 Zn-finger domain of Sec23/24
13 13 4 1 SCOP 56808 Ribosomal protein L1
13 13 3 1 SCOP 52080 Ribosomal proteins L15p and L18e
13 13 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
13 13 3 1 SCOP 54648 DLC
13 13 4 1 SCOP 56317 Carbon-nitrogen hydrolase
13 7 3 1 SCOP 69645 Arp2/3 complex subunits
13 13 3 0 SCOP 64268 PX domain
13 13 2 1 SCOP 55103 FAD-linked oxidases, C-terminal domain
13 10 4 0 SCOP 50405 Actin-crosslinking proteins
13 13 3 0 SCOP 158639 ENT-like
13 13 3 0 SCOP 54529 Mitochondrial glycoprotein MAM33-like
13 10 3 1 SCOP 47862 Saposin
13 11 4 0 SCOP 57933 TAZ domain
12 12 2 1 SCOP 50193 Ribosomal protein L14
12 12 1 1 SCOP 56047 Ribosomal protein S8
12 12 2 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
12 11 2 0 SCOP 52499 Isochorismatase-like hydrolases
12 12 1 1 SCOP 81483 Bacterial photosystem II reaction centre, L and M subunits
12 12 3 0 SCOP 55136 Probable bacterial effector-binding domain
12 12 4 1 SCOP 82704 AlbA-like
12 4 2 0 SCOP 50199 Staphylococcal nuclease
12 12 5 0 SCOP 101898 NHL repeat
12 12 5 0 SCOP 52075 Outer arm dynein light chain 1
12 12 3 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
12 12 5 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
12 12 6 1 SCOP 81271 TGS-like
12 12 4 1 SCOP 75632 Cullin homology domain
12 12 3 0 SCOP 54368 Glutamine synthetase, N-terminal domain
12 12 6 0 SCOP 109715 DEK C-terminal domain
12 12 11 0 SCOP 159042 Plus3-like
11 9 3 1 SCOP 64005 Undecaprenyl diphosphate synthase
11 11 7 0 SCOP 47027 Acyl-CoA binding protein
11 11 4 0 SCOP 54897 Protease propeptides/inhibitors
11 11 3 1 SCOP 143113 NAP-like
11 11 3 0 SCOP 52129 Caspase-like
11 11 4 0 SCOP 55658 L9 N-domain-like
11 8 6 1 SCOP 158702 Sec63 N-terminal domain-like
11 11 4 0 SCOP 82708 R3H domain
11 11 2 0 SCOP 110004 Glycolipid transfer protein, GLTP
11 11 4 0 SCOP 63491 BAG domain
11 11 4 0 SCOP 110942 HSP90 C-terminal domain
10 10 4 0 SCOP 46946 S13-like H2TH domain
10 10 3 1 SCOP 52161 Ribosomal protein L13
10 10 2 2 SCOP 48557 L-aspartase-like
10 10 5 2 SCOP 55821 YrdC/RibB
10 10 2 1 SCOP 56276 S-adenosylmethionine decarboxylase
10 10 2 1 SCOP 56815 Sec1/munc18-like (SM) proteins
10 10 5 1 SCOP 47819 HRDC-like
10 10 3 0 SCOP 161219 CHY zinc finger-like
10 10 2 0 SCOP 102712 JAB1/MPN domain
10 10 3 1 SCOP 50692 ADC-like
10 10 5 1 SCOP 51604 Enolase C-terminal domain-like
10 10 3 1 SCOP 89124 Nop domain
10 10 4 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
10 10 2 1 SCOP 52210 Succinyl-CoA synthetase domains
10 10 8 0 SCOP 48334 DNA repair protein MutS, domain III
10 8 5 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
10 10 5 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
10 10 4 0 SCOP 57196 EGF/Laminin
10 10 2 0 SCOP 47895 Transducin (alpha subunit), insertion domain
10 10 4 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
10 10 6 1 SCOP 48425 Sec7 domain
10 10 4 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
10 10 2 0 SCOP 101238 XPC-binding domain
9 9 2 1 SCOP 54999 Ribosomal protein S10
9 9 2 1 SCOP 103491 Preprotein translocase SecY subunit
9 9 3 1 SCOP 50715 Ribosomal protein L25-like
9 9 3 0 SCOP 46561 Ribosomal protein L29 (L29p)
9 8 6 1 SCOP 52949 Macro domain-like
9 9 4 2 SCOP 46626 Cytochrome c
9 9 1 1 SCOP 49777 PEBP-like
9 9 1 2 SCOP 55909 Pentein
9 9 1 1 SCOP 81558 Photosystem I subunits PsaA/PsaB
9 9 4 0 SCOP 141571 Pentapeptide repeat-like
9 9 5 1 SCOP 52016 LeuD/IlvD-like
9 9 5 0 SCOP 55154 CYTH-like phosphatases
9 9 2 0 SCOP 54736 ClpS-like
9 8 4 1 SCOP 50814 Lipocalins
9 6 4 0 SCOP 47781 RuvA domain 2-like
9 9 4 0 SCOP 160443 SMR domain-like
9 9 5 1 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
9 9 3 1 SCOP 49998 Amine oxidase catalytic domain
9 9 6 1 SCOP 81837 BEACH domain
9 9 5 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
9 9 3 0 SCOP 57184 Growth factor receptor domain
9 9 2 0 SCOP 57845 B-box zinc-binding domain
9 9 1 1 SCOP 118359 Expressed protein At2g23090/F21P24.15
9 9 6 0 SCOP 75553 Smc hinge domain
9 9 4 0 SCOP 47040 Kix domain of CBP (creb binding protein)
9 9 3 1 SCOP 81822 RuBisCo LSMT C-terminal, substrate-binding domain
9 9 4 0 SCOP 54556 Chitinase insertion domain
9 9 4 0 SCOP 46942 Elongation factor TFIIS domain 2
9 9 2 0 SCOP 161245 Zinc hairpin stack
9 9 1 1 SCOP 63887 P-domain of calnexin/calreticulin
9 9 2 1 SCOP 54585 Cdc48 domain 2-like
8 8 3 2 SCOP 53697 SIS domain
8 8 3 1 SCOP 52166 Ribosomal protein L4
8 8 2 0 SCOP 54570 Ribosomal protein S19
8 8 4 1 SCOP 53597 Dihydrofolate reductase-like
8 8 2 1 SCOP 75620 Release factor
8 8 4 1 SCOP 82649 SufE/NifU
8 8 4 1 SCOP 48613 Heme oxygenase-like
8 5 2 2 SCOP 54506 Diaminopimelate epimerase-like
8 8 4 1 SCOP 56019 The spindle assembly checkpoint protein mad2
8 8 2 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
8 8 1 1 SCOP 55770 Profilin (actin-binding protein)
8 8 3 1 SCOP 53800 Chelatase
8 8 1 1 SCOP 161077 Photosystem II antenna protein-like
8 8 1 1 SCOP 51069 Carbonic anhydrase
8 8 3 1 SCOP 101112 Oxygen-evolving enhancer protein 3,
8 6 5 1 SCOP 53218 Molybdenum cofactor biosynthesis proteins
8 8 3 1 SCOP 53213 LigB-like
8 7 3 1 SCOP 51338 Composite domain of metallo-dependent hydrolases
8 8 2 1 SCOP 54626 Chalcone isomerase
8 8 1 1 SCOP 56574 Serpins
8 8 2 1 SCOP 55895 Ribonuclease Rh-like
8 8 3 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
8 8 4 1 SCOP 49348 Clathrin adaptor appendage domain
8 8 2 0 SCOP 103107 Hypothetical protein c14orf129, hspc210
8 8 3 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
8 8 1 1 SCOP 116768 DNA-binding domain of EIN3-like
7 7 4 1 SCOP 52980 Restriction endonuclease-like
7 7 2 0 SCOP 47060 S15/NS1 RNA-binding domain
7 5 2 1 SCOP 55298 YjgF-like
7 7 4 2 SCOP 51419 PLP-binding barrel
7 7 1 0 SCOP 144122 Tim10-like
7 7 3 1 SCOP 53328 Formyltransferase
7 7 3 1 SCOP 56322 ADC synthase
7 7 3 1 SCOP 55144 LigT-like
7 7 2 0 SCOP 47072 Cysteine alpha-hairpin motif
7 7 2 0 SCOP 50044 SH3-domain
7 7 4 1 SCOP 88713 Glycoside hydrolase/deacetylase
7 4 3 2 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
7 7 3 0 SCOP 56601 beta-lactamase/transpeptidase-like
7 7 2 1 SCOP 64167 SurE-like
7 7 2 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
7 7 6 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
7 7 4 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
7 7 4 0 SCOP 57802 Rubredoxin-like
7 7 4 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
7 7 6 1 SCOP 55186 ThrRS/AlaRS common domain
7 7 2 1 SCOP 102462 Peptidyl-tRNA hydrolase II
7 7 1 1 SCOP 56003 Molybdenum cofactor-binding domain
7 7 5 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
7 5 3 1 SCOP 55979 DNA clamp
7 7 3 1 SCOP 54826 Enolase N-terminal domain-like
7 7 3 1 SCOP 48225 Seven-hairpin glycosidases
7 7 1 1 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
7 5 3 1 SCOP 56042 PurM C-terminal domain-like
7 7 3 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
7 7 1 1 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
7 7 3 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
7 7 3 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
7 4 2 1 SCOP 55945 TATA-box binding protein-like
7 7 1 1 SCOP 47741 CO dehydrogenase ISP C-domain like
7 7 2 1 SCOP 47446 Signal peptide-binding domain
7 7 3 0 SCOP 158573 GINS helical bundle-like
7 3 2 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
7 7 3 0 SCOP 116846 MIT domain
7 7 3 0 SCOP 144074 E2F-DP heterodimerization region
7 7 4 0 SCOP 88688 Families 57/38 glycoside transferase middle domain
7 6 4 0 SCOP 143791 DUSP-like
7 7 3 0 SCOP 57277 Granulin repeat
7 7 3 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
7 7 2 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
7 7 2 0 SCOP 160219 AMPKBI-like
6 6 2 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
6 6 1 1 SCOP 56420 Peptide deformylase
6 6 2 1 SCOP 54686 Ribosomal protein L16p/L10e
6 6 3 1 SCOP 55282 RL5-like
6 3 2 0 SCOP 56214 4'-phosphopantetheinyl transferase
6 5 2 0 SCOP 141091 L21p-like
6 6 4 0 SCOP 110324 Ribosomal L27 protein-like
6 6 2 1 SCOP 50324 Inorganic pyrophosphatase
6 6 2 0 SCOP 160369 Ribosomal protein L10-like
6 6 3 1 SCOP 55068 Peptide methionine sulfoxide reductase
6 6 2 1 SCOP 51351 Triosephosphate isomerase (TIM)
6 6 3 0 SCOP 54565 Ribosomal protein S16
6 6 2 0 SCOP 89360 HesB-like domain
6 6 3 0 SCOP 101908 Putative isomerase YbhE
6 6 2 1 SCOP 48140 Ribosomal protein L19 (L19e)
6 6 3 1 SCOP 48256 Citrate synthase
6 6 2 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
6 4 2 1 SCOP 53590 Nucleoside hydrolase
6 6 1 1 SCOP 57798 Casein kinase II beta subunit
6 6 2 0 SCOP 48662 Ribosomal protein L39e
6 6 2 0 SCOP 47694 Cytochrome c oxidase subunit h
6 6 4 0 SCOP 58113 Apolipoprotein A-I
6 6 3 0 SCOP 82771 GIY-YIG endonuclease
6 6 4 1 SCOP 54447 ssDNA-binding transcriptional regulator domain
6 6 3 1 SCOP 53732 Aconitase iron-sulfur domain
6 6 2 1 SCOP 101386 all-alpha NTP pyrophosphatases
6 6 4 0 SCOP 69322 Tricorn protease domain 2
6 6 5 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
6 6 1 1 SCOP 89562 RraA-like
6 6 2 1 SCOP 102198 Putative cyclase
6 6 3 1 SCOP 111321 AF1104-like
6 6 2 1 SCOP 54984 eEF-1beta-like
6 6 2 0 SCOP 160374 RplX-like
6 6 3 0 SCOP 69318 Integrin alpha N-terminal domain
6 3 1 0 SCOP 89372 Fucose-specific lectin
6 6 1 1 SCOP 82114 Riboflavin kinase-like
6 6 2 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
6 6 3 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
6 6 2 0 SCOP 143548 Serine metabolism enzymes domain
6 4 2 1 SCOP 55326 PurM N-terminal domain-like
6 6 4 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
6 6 2 0 SCOP 55904 Ornithine decarboxylase C-terminal domain
6 6 1 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
6 6 3 0 SCOP 63570 PABC (PABP) domain
6 6 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
6 6 2 0 SCOP 47050 VHP, Villin headpiece domain
6 6 3 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
6 6 3 0 SCOP 140111 Endosomal sorting complex assembly domain
6 6 2 0 SCOP 103243 KA1-like
6 6 2 0 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
6 6 4 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
6 6 4 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
6 6 2 0 SCOP 50916 Rap30/74 interaction domains
6 6 3 0 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
6 6 2 0 SCOP 140612 EB1 dimerisation domain-like
6 6 1 0 SCOP 55653 Ribosomal protein L9 C-domain
6 6 1 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
5 5 3 1 SCOP 53790 Tetrapyrrole methylase
5 5 1 1 SCOP 47973 Ribosomal protein S7
5 5 3 0 SCOP 54843 Ribosomal protein L22
5 5 3 0 SCOP 143800 L28p-like
5 5 3 1 SCOP 53748 Phosphoglycerate kinase
5 5 2 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
5 5 1 1 SCOP 51283 dUTPase-like
5 5 2 1 SCOP 52313 Ribosomal protein S2
5 5 3 1 SCOP 142695 RibA-like
5 5 2 2 SCOP 52972 ITPase-like
5 5 1 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
5 5 2 0 SCOP 82282 Homocysteine S-methyltransferase
5 5 2 0 SCOP 55257 RBP11-like subunits of RNA polymerase
5 5 1 1 SCOP 55418 eIF4e-like
5 5 2 1 SCOP 55239 RuBisCO, small subunit
5 5 2 1 SCOP 54913 GlnB-like
5 5 3 1 SCOP 48600 Chorismate mutase II
5 5 3 1 SCOP 103025 Folate-binding domain
5 5 4 1 SCOP 52335 Methylglyoxal synthase-like
5 5 3 1 SCOP 46548 alpha-helical ferredoxin
5 5 3 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
5 5 2 0 SCOP 48619 Phospholipase A2, PLA2
5 5 5 1 SCOP 142921 WGR domain-like
5 5 3 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
5 5 3 1 SCOP 56719 Type II DNA topoisomerase
5 5 1 0 SCOP 158745 LanC-like
5 5 1 0 SCOP 49265 Fibronectin type III
5 5 2 0 SCOP 160059 PriA/YqbF domain
5 5 2 1 SCOP 50621 Alanine racemase C-terminal domain-like
5 5 1 0 SCOP 81891 Poly A polymerase C-terminal region-like
5 5 3 0 SCOP 117289 Nucleoporin domain
5 5 3 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
5 5 2 0 SCOP 55550 SH2 domain
5 5 3 0 SCOP 102735 Trigger factor ribosome-binding domain
5 5 4 0 SCOP 55271 DNA repair protein MutS, domain I
5 5 4 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
5 5 5 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
5 5 1 1 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
5 5 2 0 SCOP 81531 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
5 5 3 0 SCOP 48340 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
5 5 3 0 SCOP 50911 Mannose 6-phosphate receptor domain
5 5 2 1 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
5 5 4 0 SCOP 143503 PUG domain-like
5 5 3 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
5 5 4 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
5 5 2 0 SCOP 64586 C-terminal domain of ProRS
5 5 5 1 SCOP 49441 Cytochrome f, large domain
5 5 1 0 SCOP 101224 HAND domain of the nucleosome remodeling ATPase ISWI
5 5 5 1 SCOP 47587 Domain of poly(ADP-ribose) polymerase
4 4 2 1 SCOP 64263 Prokaryotic ribosomal protein L17
4 4 2 0 SCOP 64182 DHH phosphoesterases
4 4 1 0 SCOP 143034 L35p-like
4 4 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
4 4 2 1 SCOP 82549 DAK1/DegV-like
4 4 2 1 SCOP 51730 FAD-linked oxidoreductase
4 4 2 1 SCOP 51713 tRNA-guanine transglycosylase
4 4 2 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
4 4 2 1 SCOP 55205 EPT/RTPC-like
4 4 2 0 SCOP 82657 BolA-like
4 4 1 0 SCOP 52042 Ribosomal protein L32e
4 4 2 0 SCOP 54575 Ribosomal protein L31e
4 4 1 0 SCOP 103464 Oligosaccharyltransferase subunit ost4p
4 4 1 0 SCOP 142897 TFB5-like
4 4 1 0 SCOP 103456 Preprotein translocase SecE subunit
4 4 1 0 SCOP 81514 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
4 4 2 0 SCOP 55248 PCD-like
4 4 3 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
4 4 3 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
4 4 1 0 SCOP 143447 AMMECR1-like
4 4 2 1 SCOP 101960 Stabilizer of iron transporter SufD
4 4 2 1 SCOP 46458 Globin-like
4 4 2 0 SCOP 50090 Electron transport accessory proteins
4 4 2 0 SCOP 49478 Cna protein B-type domain
4 4 2 1 SCOP 51998 PFL-like glycyl radical enzymes
4 2 1 0 SCOP 46955 Putative DNA-binding domain
4 4 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
4 4 2 0 SCOP 47413 lambda repressor-like DNA-binding domains
4 4 3 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
4 4 2 0 SCOP 143456 VC0467-like
4 4 3 1 SCOP 55826 YbaK/ProRS associated domain
4 4 2 1 SCOP 110069 ApaG-like
4 4 1 0 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
4 4 2 0 SCOP 69786 YggU-like
4 3 3 0 SCOP 50346 PRC-barrel domain
4 4 1 0 SCOP 160350 Rnp2-like
4 4 1 0 SCOP 116820 Rps17e-like
4 4 2 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
4 4 2 0 SCOP 118116 DNA mismatch repair protein MutL
4 4 4 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
4 3 2 0 SCOP 49464 Carboxypeptidase regulatory domain-like
4 4 2 1 SCOP 68923 PEP carboxykinase N-terminal domain
4 2 1 0 SCOP 53681 Aspartate/glutamate racemase
4 4 2 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
4 4 3 0 SCOP 141673 MOSC N-terminal domain-like
4 4 2 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
4 4 1 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
4 4 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
4 3 3 0 SCOP 55116 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
4 4 2 0 SCOP 54752 RecA protein, C-terminal domain
4 4 1 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
4 4 2 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
4 4 2 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
4 4 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
4 4 2 1 SCOP 69000 FAD-dependent thiol oxidase
4 2 1 0 SCOP 55394 Bactericidal permeability-increasing protein, BPI
4 4 2 1 SCOP 109993 VPS9 domain
4 4 4 0 SCOP 57414 Hairpin loop containing domain-like
4 4 1 0 SCOP 57095 Scorpion toxin-like
4 4 1 0 SCOP 111388 Pollen allergen ole e 6
4 2 2 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
4 4 2 1 SCOP 89942 eEF1-gamma domain
4 4 2 1 SCOP 50989 Clathrin heavy-chain terminal domain
4 4 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
4 4 3 0 SCOP 53150 DNA repair protein MutS, domain II
3 3 1 1 SCOP 55194 Ribosome recycling factor, RRF
3 3 1 1 SCOP 69765 IpsF-like
3 3 1 0 SCOP 56770 HydA/Nqo6-like
3 3 1 1 SCOP 54285 MoaD/ThiS
3 3 3 0 SCOP 54995 Ribosomal protein S6
3 3 1 0 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
3 3 2 0 SCOP 140718 Mediator hinge subcomplex-like
3 3 1 0 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
3 3 1 0 SCOP 63393 RNA polymerase subunits
3 3 1 0 SCOP 144210 Nop10-like SnoRNP
3 3 1 2 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
3 3 3 1 SCOP 48439 Protein prenylyltransferase
3 3 1 0 SCOP 140959 Indolic compounds 2,3-dioxygenase-like
3 3 1 1 SCOP 118203 Vacuolar ATP synthase subunit C
3 3 2 0 SCOP 143870 PF0523-like
3 3 2 0 SCOP 69618 HemD-like
3 3 2 0 SCOP 48690 Epsilon subunit of mitochondrial F1F0-ATP synthase
3 3 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
3 3 1 0 SCOP 81342 Transmembrane di-heme cytochromes
3 3 2 0 SCOP 111038 YjbQ-like
3 3 1 1 SCOP 53795 PEP carboxykinase-like
3 3 1 0 SCOP 55718 SCP-like
3 3 2 0 SCOP 142754 NadA-like
3 3 1 0 SCOP 58100 Bacterial hemolysins
3 3 3 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
3 3 1 0 SCOP 158615 RbcX-like
3 3 2 0 SCOP 103256 Hypothetical protein TM0160
3 3 1 0 SCOP 103441 PetM subunit of the cytochrome b6f complex
3 3 2 0 SCOP 49472 Transthyretin (synonym: prealbumin)
3 3 2 1 SCOP 158694 UraD-Like
3 3 1 1 SCOP 51219 TRAP-like
3 3 1 1 SCOP 50486 FMT C-terminal domain-like
3 3 3 0 SCOP 141130 Acetamidase/Formamidase-like
3 3 2 1 SCOP 100939 SPOC domain-like
3 3 2 1 SCOP 56726 DNA topoisomerase IV, alpha subunit
3 3 1 0 SCOP 55287 RPB5-like RNA polymerase subunit
3 3 1 1 SCOP 69695 SRP19
3 3 3 0 SCOP 53092 Creatinase/prolidase N-terminal domain
3 3 3 0 SCOP 46589 tRNA-binding arm
3 3 2 0 SCOP 143865 CorA soluble domain-like
3 3 1 0 SCOP 158832 Tex N-terminal region-like
3 3 3 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
3 2 2 0 SCOP 102110 (2r)-phospho-3-sulfolactate synthase ComA
3 3 1 1 SCOP 48537 Phospholipase C/P1 nuclease
3 3 2 1 SCOP 52009 Phosphohistidine domain
3 2 2 1 SCOP 51971 Nucleotide-binding domain
3 3 2 0 SCOP 90257 Myosin rod fragments
3 3 2 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
3 3 2 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
3 3 2 0 SCOP 56371 Ribosome inactivating proteins (RIP)
3 3 1 1 SCOP 110019 ERO1-like
3 3 2 1 SCOP 53920 Fe-only hydrogenase
3 3 1 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
3 3 1 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
3 3 1 1 SCOP 140869 GUN4-like
3 3 2 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
3 3 2 0 SCOP 110836 Hypothetical protein SAV1430
3 3 1 0 SCOP 69075 Glutamyl tRNA-reductase dimerization domain
3 3 2 0 SCOP 141259 CarD-like
3 3 1 0 SCOP 47794 Rad51 N-terminal domain-like
3 3 2 1 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
3 3 1 1 SCOP 101152 Mob1/phocein
3 3 1 1 SCOP 140984 PTPA-like
3 3 3 0 SCOP 47672 Transferrin receptor-like dimerisation domain
3 3 1 1 SCOP 143875 ERH-like
3 3 2 1 SCOP 101233 PWI domain
3 3 2 1 SCOP 51649 RuBisCo, C-terminal domain
3 3 1 1 SCOP 109920 Hypothetical protein At3g22680
3 3 3 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
3 3 1 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
3 3 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
3 3 1 0 SCOP 160527 V-type ATPase subunit E-like
3 3 1 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
3 3 3 1 SCOP 81886 Helical scaffold and wing domains of SecA
3 3 2 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
3 3 1 0 SCOP 140586 Dcp2 domain-like
3 3 2 0 SCOP 143517 TRCF domain-like
3 3 3 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
3 3 1 0 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
3 3 2 0 SCOP 158230 PRP4-like
2 2 2 0 SCOP 56731 DNA primase core
2 2 2 0 SCOP 48013 NusB-like
2 2 2 1 SCOP 52141 Uracil-DNA glycosylase-like
2 2 2 0 SCOP 57840 Ribosomal protein L36
2 2 1 1 SCOP 74731 Ribosomal protein L20
2 2 1 1 SCOP 103263 Chorismate synthase, AroC
2 2 1 1 SCOP 52121 Lumazine synthase
2 2 2 0 SCOP 144217 CSL zinc finger
2 1 1 0 SCOP 55469 FMN-dependent nitroreductase-like
2 2 1 1 SCOP 102886 Coproporphyrinogen III oxidase
2 2 2 0 SCOP 111278 SSo0622-like
2 2 1 0 SCOP 89895 FYSH domain
2 2 1 0 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
2 2 1 0 SCOP 51645 Malate synthase G
2 2 2 0 SCOP 53639 AraD/HMP-PK domain-like
2 2 1 0 SCOP 110849 ParB/Sulfiredoxin
2 2 1 1 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
2 2 1 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
2 2 2 1 SCOP 56529 FAH
2 2 2 1 SCOP 64153 YjeF N-terminal domain-like
2 2 1 1 SCOP 46924 RNA polymerase subunit RPB10
2 2 2 1 SCOP 63562 RPB6/omega subunit-like
2 2 1 1 SCOP 64234 Photosystem I subunit PsaD
2 2 1 1 SCOP 81536 Subunit III of photosystem I reaction centre, PsaF
2 2 1 0 SCOP 81563 Photosystem I reaction center subunit X, PsaK
2 2 1 1 SCOP 81568 Photosystem I reaction center subunit XI, PsaL
2 2 1 1 SCOP 101546 ASF1-like
2 2 1 0 SCOP 161084 MAPEG domain-like
2 2 1 1 SCOP 56266 DmpA/ArgJ-like
2 2 1 0 SCOP 82697 PurS-like
2 2 1 1 SCOP 56349 DNA breaking-rejoining enzymes
2 2 1 0 SCOP 101744 Rof/RNase P subunit-like
2 2 2 0 SCOP 89550 PHP domain-like
2 2 1 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
2 2 1 0 SCOP 54975 Acylphosphatase/BLUF domain-like
2 2 1 0 SCOP 158997 Trm112p-like
2 2 1 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
2 2 2 0 SCOP 89095 GatB/YqeY motif
2 2 1 0 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
2 2 1 0 SCOP 102588 LmbE-like
2 2 1 1 SCOP 110581 Indigoidine synthase A-like
2 2 1 0 SCOP 56821 Prismane protein-like
2 2 1 1 SCOP 101473 DhaL-like
2 2 1 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
2 2 2 0 SCOP 64076 MTH938-like
2 2 1 1 SCOP 56925 OMPA-like
2 2 1 0 SCOP 48695 Multiheme cytochromes
2 2 2 0 SCOP 158710 PSPTO4464-like
2 2 1 0 SCOP 160631 SMI1/KNR4-like
2 2 2 1 SCOP 74784 Translin
2 2 1 0 SCOP 143437 THUMP domain-like
2 2 1 0 SCOP 63867 MoeA C-terminal domain-like
2 2 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
2 2 1 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
2 2 1 1 SCOP 102645 CoaB-like
2 2 2 0 SCOP 49344 CBD9-like
2 2 1 0 SCOP 81336 F1F0 ATP synthase subunit A
2 2 1 0 SCOP 56436 C-type lectin-like
2 2 1 0 SCOP 56037 PheT/TilS domain
2 2 1 0 SCOP 75704 Mitotic arrest deficient-like 1, Mad1
2 2 1 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
2 2 1 0 SCOP 142984 Nqo1 middle domain-like
2 2 1 0 SCOP 81585 PsbU/PolX domain-like
2 2 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
2 2 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
2 2 1 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
2 2 1 1 SCOP 63882 MoeA N-terminal region -like
2 2 1 0 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
2 2 1 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
2 2 1 0 SCOP 47933 ERP29 C domain-like
2 2 2 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
2 2 1 0 SCOP 140490 Nqo1C-terminal domain-like
2 2 2 1 SCOP 141493 Allene oxide cyclase-like
2 2 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
2 2 2 0 SCOP 74924 Cap-Gly domain
2 2 1 0 SCOP 54991 Anticodon-binding domain of PheRS
2 2 1 0 SCOP 110221 AbfB domain
2 2 1 0 SCOP 116742 eIF2alpha middle domain-like
2 2 2 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
2 2 2 1 SCOP 89817 Mago nashi protein
2 2 1 1 SCOP 82109 MIR domain
2 2 2 0 SCOP 117839 WWE domain
2 2 1 0 SCOP 161065 ATP synthase D chain-like
2 2 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
2 2 1 0 SCOP 55261 GAD domain-like
2 2 1 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
2 2 2 1 SCOP 54966 RuBisCO, large subunit, small (N-terminal) domain
2 2 1 1 SCOP 110993 eIF-2-alpha, C-terminal domain
2 2 2 1 SCOP 47212 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
2 2 1 1 SCOP 140427 VPS28 C-terminal domain-like
2 1 1 0 SCOP 51156 Insect cysteine-rich antifreeze protein
2 2 1 0 SCOP 101931 Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain
2 2 1 1 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
2 2 1 0 SCOP 47031 Second domain of FERM
2 2 1 0 SCOP 88802 Pre-PUA domain
2 2 1 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
2 2 2 0 SCOP 69848 LCCL domain
2 2 1 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
2 2 1 0 SCOP 101420 C-terminal domain of Ku80
2 2 1 1 SCOP 160897 Taf5 N-terminal domain-like
2 2 1 0 SCOP 144256 TSP9-like
2 2 1 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
2 2 1 0 SCOP 81502 ISP transmembrane anchor
2 2 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
2 2 2 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
2 2 2 1 SCOP 81767 Pre-protein crosslinking domain of SecA
2 2 1 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
2 2 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
2 2 2 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
2 2 1 0 SCOP 109736 FGAM synthase PurL, linker domain
2 2 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 0 SCOP 82607 YbaB-like
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 1 SCOP 51658 Xylose isomerase-like
1 1 1 1 SCOP 75625 YebC-like
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
1 1 1 0 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
1 1 1 0 SCOP 54060 His-Me finger endonucleases
1 1 1 0 SCOP 117991 YbeD/HP0495-like
1 1 1 1 SCOP 56796 Dehydroquinate synthase-like
1 1 1 1 SCOP 55387 Frataxin/Nqo15-like
1 1 1 0 SCOP 81321 Family A G protein-coupled receptor-like
1 1 1 0 SCOP 141678 MAL13P1.257-like
1 1 1 1 SCOP 69500 DTD-like
1 1 1 0 SCOP 81411 Mitochondrial cytochrome c oxidase subunit VIa
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 0 SCOP 81508 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 0 SCOP 46988 Tubulin chaperone cofactor A
1 1 1 0 SCOP 81442 Cytochrome c oxidase subunit I-like
1 1 1 0 SCOP 141734 HisI-like
1 1 1 1 SCOP 57662 Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
1 1 1 0 SCOP 161037 Photosystem II reaction center protein K, PsbK
1 1 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 1 1 SCOP 51717 Dihydropteroate synthetase-like
1 1 1 0 SCOP 103642 Sec-C motif
1 1 1 1 SCOP 118196 YaeB-like
1 1 1 0 SCOP 53807 "Helical backbone" metal receptor
1 1 1 0 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 1 SCOP 143990 YbiA-like
1 1 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 1 0 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 0 SCOP 159501 EreA/ChaN-like
1 1 1 0 SCOP 140663 TTHA0068-like
1 1 1 1 SCOP 54111 Urease, gamma-subunit
1 1 1 1 SCOP 51278 Urease, beta-subunit
1 1 1 1 SCOP 143081 BB1717-like
1 1 1 1 SCOP 51391 Thiamin phosphate synthase
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 1 SCOP 160909 ATP12-like
1 1 1 0 SCOP 56747 Prim-pol domain
1 1 1 0 SCOP 142338 CofD-like
1 1 1 0 SCOP 159659 Cgl1923-like
1 1 1 0 SCOP 142764 YgbK-like
1 1 1 0 SCOP 50939 Sialidases
1 1 1 0 SCOP 160104 Acetoacetate decarboxylase-like
1 1 1 0 SCOP 75708 Chemotaxis phosphatase CheZ
1 1 1 0 SCOP 46950 Double-stranded DNA-binding domain
1 1 1 1 SCOP 142535 AF0625-like
1 1 1 0 SCOP 50960 TolB, C-terminal domain
1 1 1 0 SCOP 82093 Heme chaperone CcmE
1 1 1 0 SCOP 55608 Homing endonucleases
1 1 1 0 SCOP 69304 Tricorn protease N-terminal domain
1 1 1 0 SCOP 141255 YccV-like
1 1 1 0 SCOP 63825 YWTD domain
1 1 1 0 SCOP 55234 Cyanase C-terminal domain
1 1 1 1 SCOP 142877 EndoU-like
1 1 1 0 SCOP 144206 NOB1 zinc finger-like
1 1 1 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 116726 TrkA C-terminal domain-like
1 1 1 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
1 1 1 0 SCOP 47162 Apolipoprotein
1 1 1 0 SCOP 58022 XRCC4, C-terminal oligomerization domain
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 0 SCOP 110111 Ctag/Cox11
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 1 SCOP 101904 GyrA/ParC C-terminal domain-like
1 1 1 0 SCOP 63418 MurE/MurF N-terminal domain
1 1 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
1 1 1 1 SCOP 55637 Cell cycle regulatory proteins
1 1 1 0 SCOP 48431 Lipovitellin-phosvitin complex, superhelical domain
1 1 1 0 SCOP 90250 Troponin coil-coiled subunits
1 1 1 0 SCOP 140860 Pseudo ankyrin repeat-like
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 0 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
1 1 1 0 SCOP 54452 MHC antigen-recognition domain
1 1 1 0 SCOP 100895 Kazal-type serine protease inhibitors
1 1 1 0 SCOP 47938 Functional domain of the splicing factor Prp18
1 1 1 0 SCOP 48097 Regulator of G-protein signaling, RGS
1 1 1 0 SCOP 69012 alpha-ketoacid dehydrogenase kinase, N-terminal domain
1 1 1 1 SCOP 140102 ISY1 domain-like
1 1 1 0 SCOP 100897 Plant proteinase inhibitors
1 1 1 0 SCOP 144292 occludin/ELL-like
1 1 1 0 SCOP 57424 LDL receptor-like module
1 1 1 0 SCOP 81872 BRCA2 helical domain
1 1 1 0 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 0 SCOP 49758 Calpain large subunit, middle domain (domain III)
1 1 1 0 SCOP 103431 Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor
1 1 1 1 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 102741 Obg GTP-binding protein C-terminal domain
1 1 1 0 SCOP 47055 TAF(II)230 TBP-binding fragment
1 1 1 0 SCOP 160996 HI0933 insert domain-like
1 1 1 0 SCOP 81878 BRCA2 tower domain

Jump to [ Top of page · Assignment statistics ]


The following superfamilies have one or more weak hits:

SCOP superfamily Head morphogenesis protein gp7
SCOP superfamily Zinc finger domain of DNA polymerase-alpha
SCOP superfamily Neurotransmitter-gated ion-channel transmembrane pore
SCOP superfamily GCM domain
SCOP superfamily YajQ-like
SCOP superfamily Proguanylin
SCOP superfamily Doublecortin (DC)
SCOP superfamily CoA-transferase family III (CaiB/BaiF)
SCOP superfamily Adsorption protein p2
SCOP superfamily Prokaryotic lipoproteins and lipoprotein localization factors
SCOP superfamily N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
SCOP superfamily Replisome organizer (g39p helicase loader/inhibitor protein)
SCOP superfamily Receptor-binding domain of short tail fibre protein gp12
SCOP superfamily ssDNA viruses
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily Tumor suppressor gene product Apc
SCOP superfamily Apical membrane antigen 1
SCOP superfamily TSP-1 type 1 repeat
SCOP superfamily Mechanosensitive channel protein MscS (YggB), C-terminal domain
SCOP superfamily Probable GTPase Der, C-terminal domain
SCOP superfamily BAH domain
SCOP superfamily Crustacean CHH/MIH/GIH neurohormone
SCOP superfamily beta-catenin-interacting protein ICAT
SCOP superfamily a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily Protein serine/threonine phosphatase 2C, C-terminal domain
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Photosystem II reaction centre subunit H, transmembrane region
SCOP superfamily Cytochrome c oxidase subunit II-like, transmembrane region
SCOP superfamily Cytochrome c oxidase subunit III-like
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIc
SCOP superfamily ABC transporter involved in vitamin B12 uptake, BtuC
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Rotavirus NSP2 fragment, N-terminal domain
SCOP superfamily Putative transcriptional regulator TM1602, C-terminal domain
SCOP superfamily Monomethylamine methyltransferase MtmB
SCOP superfamily Dipeptidyl peptidase I (cathepsin C), exclusion domain
SCOP superfamily V-region of surface antigen I/II (SA I/II, PAC)
SCOP superfamily Major surface antigen p30, SAG1
SCOP superfamily Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
SCOP superfamily Aconitase B, N-terminal domain
SCOP superfamily Variable surface antigen VlsE
SCOP superfamily TolA/TonB C-terminal domain
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily Colicin E3 receptor domain
SCOP superfamily Eea1 homodimerisation domain
SCOP superfamily Head and neck region of the ectodomain of NDV fusion glycoprotein
SCOP superfamily OMPT-like
SCOP superfamily Urease metallochaperone UreE, C-terminal domain
SCOP superfamily Type III secretory system chaperone-like
SCOP superfamily Cell wall binding repeat
SCOP superfamily Quinohemoprotein amine dehydrogenase A chain, domain 3
SCOP superfamily Nucleoplasmin-like core domain
SCOP superfamily Integrin domains
SCOP superfamily Quinohemoprotein amine dehydrogenase C chain
SCOP superfamily Nuclear receptor coactivator interlocking domain
SCOP superfamily Anti-sigma factor AsiA
SCOP superfamily RecG, N-terminal domain
SCOP superfamily FAT domain of focal adhesion kinase
SCOP superfamily Recombination endonuclease VII, C-terminal and dimerization domains
SCOP superfamily Rho N-terminal domain-like
SCOP superfamily F1 ATPase inhibitor, IF1, C-terminal domain
SCOP superfamily Intermediate filament protein, coiled coil region
SCOP superfamily Phase 1 flagellin
SCOP superfamily DNA-binding domain of intron-encoded endonucleases
SCOP superfamily YopH tyrosine phosphatase N-terminal domain
SCOP superfamily CNF1/YfiH-like putative cysteine hydrolases
SCOP superfamily Hsp33 domain
SCOP superfamily SirA-like
SCOP superfamily Chorismate lyase-like
SCOP superfamily Methuselah ectodomain
SCOP superfamily SAND domain-like
SCOP superfamily Nicotinic receptor ligand binding domain-like
SCOP superfamily Telomeric repeat binding factor (TRF) dimerisation domain
SCOP superfamily PTS-regulatory domain, PRD
SCOP superfamily Frizzled cysteine-rich domain
SCOP superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain
SCOP superfamily Colicin Ia, N-terminal domain
SCOP superfamily Clostridium neurotoxins, "coiled-coil" domain
SCOP superfamily Variant surface glycoprotein (N-terminal domain)
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily N-terminal coiled coil domain from apc
SCOP superfamily Fibritin
SCOP superfamily Outer membrane lipoprotein
SCOP superfamily Delta-sleep-inducing peptide immunoreactive peptide
SCOP superfamily Coiled-coil dimerization domain from cortexillin I
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Chicken cartilage matrix protein
SCOP superfamily Inhibitor of apoptosis (IAP) repeat
SCOP superfamily Ada DNA repair protein, N-terminal domain (N-Ada 10)
SCOP superfamily Zinc domain conserved in yeast copper-regulated transcription factors
SCOP superfamily Metallothionein
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
SCOP superfamily Hypothetical protein MTH1184
SCOP superfamily Microbial and mitochondrial ADK, insert "zinc finger" domain
SCOP superfamily Zn2/Cys6 DNA-binding domain
SCOP superfamily GLA-domain
SCOP superfamily Invertebrate chitin-binding proteins
SCOP superfamily Type X cellulose binding domain, CBDX
SCOP superfamily Thyroglobulin type-1 domain
SCOP superfamily FnI-like domain
SCOP superfamily Antifungal protein (AGAFP)
SCOP superfamily TNF receptor-like
SCOP superfamily Methylamine dehydrogenase, L chain
SCOP superfamily Trefoil
SCOP superfamily Kringle-like
SCOP superfamily BPTI-like
SCOP superfamily Midkine
SCOP superfamily Leech antihemostatic proteins
SCOP superfamily omega toxin-like
SCOP superfamily Agouti-related protein
SCOP superfamily Aerolisin/ETX pore-forming domain
SCOP superfamily Lipovitellin-phosvitin complex; beta-sheet shell regions
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily Porins
SCOP superfamily Bcl-2 inhibitors of programmed cell death
SCOP superfamily Colicin
SCOP superfamily Fibrinogen C-terminal domain-like
SCOP superfamily SRCR-like
SCOP superfamily SMAD MH1 domain
SCOP superfamily Pyruvoyl-dependent histidine and arginine decarboxylases
SCOP superfamily Aldehyde ferredoxin oxidoreductase, N-terminal domain
SCOP superfamily Nitrile hydratase alpha chain
SCOP superfamily N-acetylmuramoyl-L-alanine amidase-like
SCOP superfamily CytB endotoxin-like
SCOP superfamily Subtilisin inhibitor
SCOP superfamily tRNA-intron endonuclease N-terminal domain-like
SCOP superfamily Yeast killer toxins
SCOP superfamily Hedgehog/DD-peptidase
SCOP superfamily Formylmethanofuran:tetrahydromethanopterin formyltransferase
SCOP superfamily Methyl-coenzyme M reductase subunits
SCOP superfamily Nucleotide cyclase
SCOP superfamily CheY-binding domain of CheA
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
SCOP superfamily Heme-binding protein A (HasA)
SCOP superfamily Allophycocyanin linker chain (domain)
SCOP superfamily Colicin E3 immunity protein
SCOP superfamily DsbC/DsbG N-terminal domain-like
SCOP superfamily Staphylokinase/streptokinase
SCOP superfamily Interleukin 8-like chemokines
SCOP superfamily Prion-like
SCOP superfamily RNase A-like
SCOP superfamily Microbial ribonucleases
SCOP superfamily Glutaminase/Asparaginase
SCOP superfamily HybD-like
SCOP superfamily PTS system fructose IIA component-like
SCOP superfamily PTS system IIB component-like
SCOP superfamily Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
SCOP superfamily Bacterial luciferase-like
SCOP superfamily E2 regulatory, transactivation domain
SCOP superfamily Hedgehog/intein (Hint) domain
SCOP superfamily Fibre shaft of virus attachment proteins
SCOP superfamily Regulatory protein AraC
SCOP superfamily An insect antifreeze protein
SCOP superfamily beta-Roll
SCOP superfamily Oncogene products
SCOP superfamily D-aminopeptidase, middle and C-terminal domains
SCOP superfamily beta-Barrel protease inhibitors
SCOP superfamily Avidin/streptavidin
SCOP superfamily XRCC4, N-terminal domain
SCOP superfamily Herpes virus serine proteinase, assemblin
SCOP superfamily Core binding factor beta, CBF
SCOP superfamily TIMP-like
SCOP superfamily Bacterial enterotoxins
SCOP superfamily Myosin S1 fragment, N-terminal domain
SCOP superfamily Baculovirus p35 protein
SCOP superfamily Spermadhesin, CUB domain
SCOP superfamily TNF-like
SCOP superfamily ENV polyprotein, receptor-binding domain
SCOP superfamily Group II dsDNA viruses VP
SCOP superfamily gamma-Crystallin-like
SCOP superfamily Neurophysin II
SCOP superfamily Rab geranylgeranyltransferase alpha-subunit, insert domain
SCOP superfamily p53-like transcription factors
SCOP superfamily Carbohydrate-binding domain
SCOP superfamily Cadherin-like
SCOP superfamily Transglutaminase, two C-terminal domains
SCOP superfamily PKD domain
SCOP superfamily Immunoglobulin
SCOP superfamily Moesin tail domain
SCOP superfamily FinO-like
SCOP superfamily Tetraspanin
SCOP superfamily Fungal elicitin
SCOP superfamily Serum albumin-like
SCOP superfamily Nuclear receptor ligand-binding domain
SCOP superfamily gene 59 helicase assembly protein
SCOP superfamily Cytochrome c oxidase subunit E
SCOP superfamily Bacterial muramidases
SCOP superfamily Ras GEF
SCOP superfamily A virus capsid protein alpha-helical domain
SCOP superfamily Aldehyde ferredoxin oxidoreductase, C-terminal domains
SCOP superfamily TrpR-like
SCOP superfamily Chondroitin AC/alginate lyase
SCOP superfamily Uteroglobin-like
SCOP superfamily Transcription factor STAT-4 N-domain
SCOP superfamily Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
SCOP superfamily DBL homology domain (DH-domain)
SCOP superfamily FliG
SCOP superfamily N-terminal domain of DnaB helicase
SCOP superfamily DEATH domain
SCOP superfamily Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
SCOP superfamily Bacteriocin AS-48
SCOP superfamily Apolipophorin-III
SCOP superfamily Hepatitis B viral capsid (hbcag)
SCOP superfamily Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
SCOP superfamily Anaphylotoxins (complement system)
SCOP superfamily STAT
SCOP superfamily Methionine synthase domain
SCOP superfamily Ribbon-helix-helix
SCOP superfamily Insect pheromone/odorant-binding proteins
SCOP superfamily Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
SCOP superfamily ROP protein
SCOP superfamily 4-helical cytokines
SCOP superfamily alpha-catenin/vinculin-like
SCOP superfamily TMV-like viral coat proteins
SCOP superfamily Hemerythrin-like
SCOP superfamily Cytochromes
SCOP superfamily Aspartate receptor, ligand-binding domain
SCOP superfamily Mitochondrial import receptor subunit Tom20
SCOP superfamily Diol dehydratase, gamma subunit
SCOP superfamily RAP domain-like
SCOP superfamily Smac/diablo
SCOP superfamily Enzyme IIa from lactose specific PTS, IIa-lac
SCOP superfamily Spectrin repeat
SCOP superfamily DNA helicase RuvA subunit, C-terminal domain
SCOP superfamily N-terminal Zn binding domain of HIV integrase
SCOP superfamily C-terminal effector domain of the bipartite response regulators
SCOP superfamily Epsilon subunit of F1F0-ATP synthase C-terminal domain
SCOP superfamily Eukaryotic DNA topoisomerase I, dispensable insert domain
SCOP superfamily HR1 repeat
SCOP superfamily GreA transcript cleavage protein, N-terminal domain
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily Gam-like
SCOP superfamily RILP dimerisation region
SCOP superfamily T-antigen specific domain-like
SCOP superfamily E7 C-terminal domain-like
SCOP superfamily E6 C-terminal domain-like
SCOP superfamily YfgJ-like
SCOP superfamily MetI-like
SCOP superfamily MgtE membrane domain-like
SCOP superfamily SNF-like
SCOP superfamily ATP synthase B chain-like
SCOP superfamily Photosystem II reaction center protein I, PsbI
SCOP superfamily flu NP-like
SCOP superfamily MalF N-terminal region-like
SCOP superfamily YacF-like
SCOP superfamily PH0156-like
SCOP superfamily Api92-like
SCOP superfamily NE1680-like
SCOP superfamily FLJ32549 C-terminal domain-like
SCOP superfamily SpoVG-like
SCOP superfamily BB2672-like
SCOP superfamily PA1123-like
SCOP superfamily NMB0513-like
SCOP superfamily BLRF2-like
SCOP superfamily PB2 C-terminal domain-like
SCOP superfamily PG1857-like
SCOP superfamily BH3703-like
SCOP superfamily YdfO-like
SCOP superfamily NosL/MerB-like
SCOP superfamily MTH889-like
SCOP superfamily Bacterial polysaccharide co-polymerase-like
SCOP superfamily NMB0488-like
SCOP superfamily YcgL-like
SCOP superfamily YerB-like
SCOP superfamily AttH-like
SCOP superfamily WSSV envelope protein-like
SCOP superfamily NEAT domain-like
SCOP superfamily MgtE N-terminal domain-like
SCOP superfamily HP0242-like
SCOP superfamily TerB-like
SCOP superfamily RPA2825-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily Jann4075-like
SCOP superfamily TAFH domain-like
SCOP superfamily FLJ32549 domain-like
SCOP superfamily GspK insert domain-like
SCOP superfamily PG0775 C-terminal domain-like
SCOP superfamily DsbB-like
SCOP superfamily Bacillus cereus metalloprotein-like
SCOP superfamily HP0062-like
SCOP superfamily TM1646-like
SCOP superfamily Sec2 N-terminal region
SCOP superfamily MPN010-like
SCOP superfamily Vanabin-like
SCOP superfamily Heme iron utilization protein-like
SCOP superfamily ImpE-like
SCOP superfamily FdhE-like
SCOP superfamily Peptidoglycan deacetylase N-terminal noncatalytic region
SCOP superfamily ApbE-like
SCOP superfamily SARS receptor-binding domain-like
SCOP superfamily TM1622-like
SCOP superfamily Transposase IS200-like
SCOP superfamily DOPA-like
SCOP superfamily YjbR-like
SCOP superfamily PhtA domain-like
SCOP superfamily CinA-like
SCOP superfamily BH3618-like
SCOP superfamily Agglutinin HPA-like
SCOP superfamily Glu-tRNAGln amidotransferase C subunit
SCOP superfamily DNA terminal protein
SCOP superfamily PriB N-terminal domain-like
SCOP superfamily TROVE domain-like
SCOP superfamily USP8 N-terminal domain-like
SCOP superfamily YidB-like
SCOP superfamily RUN domain-like
SCOP superfamily Rv1873-like
SCOP superfamily PA2201 C-terminal domain-like
SCOP superfamily AF0941-like
SCOP superfamily IpaD-like
SCOP superfamily SP0561-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily YozE-like
SCOP superfamily Type III secretion system domain
SCOP superfamily MukF C-terminal domain-like
SCOP superfamily FlgN-like
SCOP superfamily LemA-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily YppE-like
SCOP superfamily ChaB-like
SCOP superfamily MxiH-like
SCOP superfamily SPy1572-like
SCOP superfamily Calcyclin-binding protein-like
SCOP superfamily Synuclein
SCOP superfamily HSP33 redox switch-like
SCOP superfamily Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain
SCOP superfamily Connexin43
SCOP superfamily Proton glutamate symport protein
SCOP superfamily Viral ssDNA binding protein
SCOP superfamily RalF, C-terminal domain
SCOP superfamily DNA primase DnaG, C-terminal domain
SCOP superfamily Hypothetical protein MPN330
SCOP superfamily YfbU-like
SCOP superfamily RNA-binding protein She2p
SCOP superfamily Hypothetical protein YqbG
SCOP superfamily Hook domain
SCOP superfamily TrmE connector domain
SCOP superfamily XseB-like
SCOP superfamily NADH pyrophosphatase intervening domain
SCOP superfamily DNA methylase specificity domain
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily Geminin coiled-coil domain
SCOP superfamily YAP1 redox domain
SCOP superfamily Hormone receptor domain
SCOP superfamily OmpH-like
SCOP superfamily HlyD-like secretion proteins
SCOP superfamily Urocanase
SCOP superfamily Recombination protein RecR
SCOP superfamily Putative modulator of DNA gyrase, PmbA/TldD
SCOP superfamily Hypothetical protein PF0899
SCOP superfamily TTHA0583/YokD-like
SCOP superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
SCOP superfamily I/LWEQ domain
SCOP superfamily A middle domain of Talin 1
SCOP superfamily NblA-like
SCOP superfamily CAPPD, an extracellular domain of amyloid beta A4 protein
SCOP superfamily Phenylalanine zipper
SCOP superfamily Domain from hypothetical 2610208m17rik protein
SCOP superfamily Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
SCOP superfamily PhoU-like
SCOP superfamily KorB DNA-binding domain-like
SCOP superfamily KRAB domain (Kruppel-associated box)
SCOP superfamily DnaK suppressor protein DksA, alpha-hairpin domain
SCOP superfamily Proline/betaine transporter ProP, C-terminal cytoplasmic domain
SCOP superfamily G protein-binding domain
SCOP superfamily Plexin repeat
SCOP superfamily Autotransporter
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily Hypothetical protein PH1602
SCOP superfamily Sensory domain-like
SCOP superfamily Hypothetical protein TT1725
SCOP superfamily Chromosomal protein MC1
SCOP superfamily NIF3 (NGG1p interacting factor 3)-like
SCOP superfamily DNA polymerase III psi subunit
SCOP superfamily AXH domain
SCOP superfamily Trimeric adhesin
SCOP superfamily Adhesin YadA, collagen-binding domain
SCOP superfamily Bacterial fluorinating enzyme, C-terminal domain
SCOP superfamily Hypothetical protein YgiW
SCOP superfamily SspB-like
SCOP superfamily Hypothetical protein YfhH
SCOP superfamily Superantigen (mitogen) Ypm
SCOP superfamily Smp-1-like
SCOP superfamily Dextranase, N-terminal domain
SCOP superfamily Stathmin
SCOP superfamily ADP-ribosylglycohydrolase
SCOP superfamily P40 nucleoprotein
SCOP superfamily Hypothetical protein MTH393
SCOP superfamily Methenyltetrahydrofolate cyclohydrolase-like
SCOP superfamily Docking domain A of the erythromycin polyketide synthase (DEBS)
SCOP superfamily Flagellar export chaperone FliS
SCOP superfamily Staphylocoagulase
SCOP superfamily Typo IV secretion system protein TraC
SCOP superfamily IP3 receptor type 1 binding core, domain 2

Jump to [ Top of page · Assignment statistics ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.