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  Home > Genomes > Superfamily assignments for Trichomonas vaginalis


Trichomonas vaginalis superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 97883 total
27111 (28 %) with assignment
287 average length
26 % amino acid coverage
Domains: 33248 total
661 unique superfamilies
330 unique families
271 average length
50.3 average superfamily size
98 % formed by duplication
Domain combinations: 506 domain pairs
2025 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
4005 3829 103 9 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
3658 3067 88 1 SCOP 48403 Ankyrin repeat
3094 3093 15 3 SCOP 53098 Ribonuclease H-like
2714 2712 13 2 SCOP 56672 DNA/RNA polymerases
1659 976 71 1 SCOP 52058 L domain-like
1305 1220 99 9 SCOP 48371 ARM repeat
1104 1102 68 2 SCOP 56112 Protein kinase-like (PK-like)
1024 1024 3 0 SCOP 54060 His-Me finger endonucleases
804 804 4 0 SCOP 54616 DNA-binding domain of Mlu1-box binding protein MBP1
609 512 22 0 SCOP 46689 Homeodomain-like
582 530 90 1 SCOP 50978 WD40 repeat-like
570 570 7 6 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
510 510 5 0 SCOP 56747 Prim-pol domain
280 164 16 2 SCOP 53067 Actin-like ATPase domain
280 280 19 6 SCOP 54001 Cysteine proteinases
261 261 2 0 SCOP 88874 Receptor-binding domain of short tail fibre protein gp12
242 197 27 1 SCOP 54928 RNA-binding domain, RBD
230 166 43 2 SCOP 48452 TPR-like
230 207 38 1 SCOP 54236 Ubiquitin-like
230 230 18 0 SCOP 140860 Pseudo ankyrin repeat-like
228 228 5 2 SCOP 56300 Metallo-dependent phosphatases
217 172 14 0 SCOP 51126 Pectin lyase-like
216 212 27 0 SCOP 49785 Galactose-binding domain-like
204 157 20 2 SCOP 52833 Thioredoxin-like
189 180 25 0 SCOP 52047 RNI-like
181 180 41 1 SCOP 50729 PH domain-like
179 162 43 0 SCOP 57850 RING/U-box
174 149 26 1 SCOP 47473 EF-hand
164 58 20 1 SCOP 55781 GAF domain-like
144 72 34 0 SCOP 81901 HCP-like
136 136 24 8 SCOP 51735 NAD(P)-binding Rossmann-fold domains
134 97 19 0 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
132 132 6 0 SCOP 47370 Bromodomain
122 121 5 0 SCOP 103473 MFS general substrate transporter
117 114 21 1 SCOP 46785 "Winged helix" DNA-binding domain
117 66 6 1 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
116 116 5 1 SCOP 55073 Nucleotide cyclase
114 114 4 1 SCOP 53474 alpha/beta-Hydrolases
109 107 34 1 SCOP 81837 BEACH domain
105 103 33 5 SCOP 51445 (Trans)glycosidases
102 102 7 1 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
100 100 9 3 SCOP 56784 HAD-like
96 73 19 0 SCOP 54160 Chromo domain-like
94 92 24 1 SCOP 49899 Concanavalin A-like lectins/glucanases
94 94 6 0 SCOP 55785 PYP-like sensor domain (PAS domain)
91 91 4 1 SCOP 47113 Histone-fold
88 68 21 3 SCOP 50249 Nucleic acid-binding proteins
81 73 23 0 SCOP 46934 UBA-like
72 69 27 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
70 70 7 1 SCOP 53448 Nucleotide-diphospho-sugar transferases
70 70 7 0 SCOP 52218 Flavoproteins
69 58 22 0 SCOP 57997 Tropomyosin
68 66 22 1 SCOP 53300 vWA-like
67 67 8 1 SCOP 56204 Hect, E3 ligase catalytic domain
64 44 9 0 SCOP 47954 Cyclin-like
64 64 8 0 SCOP 48350 GTPase activation domain, GAP
62 61 14 2 SCOP 56059 Glutathione synthetase ATP-binding domain-like
62 60 12 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
61 61 18 2 SCOP 109604 HD-domain/PDEase-like
60 60 8 1 SCOP 52743 Subtilisin-like
58 37 10 0 SCOP 57184 Growth factor receptor domain
56 47 8 0 SCOP 47095 HMG-box
51 51 6 5 SCOP 53383 PLP-dependent transferases
48 48 5 1 SCOP 54495 UBC-like
48 48 12 0 SCOP 54695 POZ domain
46 46 12 0 SCOP 81995 beta-sandwich domain of Sec23/24
45 45 17 2 SCOP 54211 Ribosomal protein S5 domain 2-like
45 45 7 1 SCOP 64356 SNARE-like
44 44 10 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
43 40 8 3 SCOP 56281 Metallo-hydrolase/oxidoreductase
43 43 7 0 SCOP 117281 Kelch motif
42 26 9 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
42 40 9 0 SCOP 69349 Phage fibre proteins
42 42 14 1 SCOP 46565 Chaperone J-domain
39 39 2 1 SCOP 53254 Phosphoglycerate mutase-like
38 38 8 0 SCOP 103657 BAR/IMD domain-like
38 38 7 1 SCOP 53187 Zn-dependent exopeptidases
38 38 5 0 SCOP 90123 ABC transporter transmembrane region
38 29 15 0 SCOP 57903 FYVE/PHD zinc finger
38 21 5 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
37 37 6 1 SCOP 50104 Translation proteins SH3-like domain
36 36 8 0 SCOP 58038 SNARE fusion complex
36 30 6 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
36 23 7 0 SCOP 47862 Saposin
35 35 3 0 SCOP 57829 Zn-binding ribosomal proteins
35 35 8 0 SCOP 49348 Clathrin adaptor appendage domain
34 34 4 1 SCOP 51395 FMN-linked oxidoreductases
34 32 12 1 SCOP 81296 E set domains
34 28 7 0 SCOP 161270 PspA lactotransferrin-binding region
32 32 4 0 SCOP 53649 Alkaline phosphatase-like
32 31 6 1 SCOP 81665 Calcium ATPase, transmembrane domain M
32 32 6 0 SCOP 81653 Calcium ATPase, transduction domain A
31 31 6 0 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
30 30 2 1 SCOP 57798 Casein kinase II beta subunit
30 15 9 0 SCOP 49452 Starch-binding domain-like
30 30 3 1 SCOP 48225 Seven-hairpin glycosidases
30 30 5 0 SCOP 109993 VPS9 domain
29 29 5 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
28 23 7 2 SCOP 52799 (Phosphotyrosine protein) phosphatases II
28 24 9 0 SCOP 50044 SH3-domain
28 9 6 1 SCOP 63411 LuxS/MPP-like metallohydrolase
28 23 10 0 SCOP 90257 Myosin rod fragments
28 15 7 0 SCOP 47031 Second domain of FERM
27 27 9 1 SCOP 81606 PP2C-like
27 27 10 0 SCOP 54862 4Fe-4S ferredoxins
27 26 2 1 SCOP 56796 Dehydroquinate synthase-like
27 24 3 0 SCOP 55469 FMN-dependent nitroreductase-like
27 27 5 1 SCOP 52490 Tubulin nucleotide-binding domain-like
27 27 4 1 SCOP 55307 Tubulin C-terminal domain-like
26 26 8 0 SCOP 49764 HSP20-like chaperones
26 26 11 0 SCOP 82919 Zn-finger domain of Sec23/24
25 25 5 1 SCOP 55315 L30e-like
25 18 5 2 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
25 24 12 1 SCOP 47576 Calponin-homology domain, CH-domain
25 25 2 1 SCOP 48445 14-3-3 protein
24 24 1 1 SCOP 51430 NAD(P)-linked oxidoreductase
24 15 4 1 SCOP 55753 Actin depolymerizing proteins
24 24 10 2 SCOP 50447 Translation proteins
23 22 15 1 SCOP 52374 Nucleotidylyl transferase
23 23 1 1 SCOP 56815 Sec1/munc18-like (SM) proteins
23 23 14 0 SCOP 82171 DPP6 N-terminal domain-like
23 23 3 0 SCOP 52075 Outer arm dynein light chain 1
22 21 5 1 SCOP 52821 Rhodanese/Cell cycle control phosphatase
22 22 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
22 22 5 0 SCOP 54427 NTF2-like
22 5 5 0 SCOP 50199 Staphylococcal nuclease
22 13 8 0 SCOP 52113 BRCT domain
22 22 11 0 SCOP 48065 DBL homology domain (DH-domain)
21 21 2 0 SCOP 55418 eIF4e-like
21 21 1 0 SCOP 55770 Profilin (actin-binding protein)
21 15 9 0 SCOP 51206 cAMP-binding domain-like
21 21 2 0 SCOP 48537 Phospholipase C/P1 nuclease
21 7 1 1 SCOP 55973 S-adenosylmethionine synthetase
21 21 7 0 SCOP 51011 Glycosyl hydrolase domain
21 21 5 0 SCOP 57863 ArfGap/RecO-like zinc finger
21 21 9 1 SCOP 48425 Sec7 domain
20 16 7 2 SCOP 51905 FAD/NAD(P)-binding domain
20 20 3 0 SCOP 53597 Dihydrofolate reductase-like
20 20 2 3 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
20 20 11 2 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
20 20 2 1 SCOP 48366 Ras GEF
19 19 3 0 SCOP 50182 Sm-like ribonucleoproteins
19 19 6 2 SCOP 51182 RmlC-like cupins
19 19 7 2 SCOP 56219 DNase I-like
19 19 13 0 SCOP 69322 Tricorn protease domain 2
19 19 4 1 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
19 19 3 0 SCOP 48592 GroEL equatorial domain-like
19 19 3 2 SCOP 52029 GroEL apical domain-like
19 19 3 0 SCOP 143791 DUSP-like
19 18 4 1 SCOP 63887 P-domain of calnexin/calreticulin
18 9 2 4 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
18 18 12 2 SCOP 55681 Class II aaRS and biotin synthetases
18 18 7 1 SCOP 54292 2Fe-2S ferredoxin-like
18 18 2 1 SCOP 56801 Acetyl-CoA synthetase-like
18 17 5 1 SCOP 74650 Galactose mutarotase-like
18 18 2 0 SCOP 54518 Tubby C-terminal domain-like
18 18 5 0 SCOP 47661 t-snare proteins
18 18 5 3 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
18 18 2 1 SCOP 56327 LDH C-terminal domain-like
18 6 2 0 SCOP 53738 Phosphoglucomutase, first 3 domains
18 18 3 0 SCOP 57845 B-box zinc-binding domain
18 18 2 0 SCOP 54849 GroEL-intermediate domain like
17 17 3 0 SCOP 50985 RCC1/BLIP-II
17 17 13 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
17 11 6 0 SCOP 57667 beta-beta-alpha zinc fingers
17 17 3 2 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
17 17 4 1 SCOP 111347 Rap/Ran-GAP
17 17 4 0 SCOP 75632 Cullin homology domain
16 16 1 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
16 15 6 0 SCOP 55811 Nudix
16 16 5 1 SCOP 88723 PIN domain-like
16 16 2 0 SCOP 52129 Caspase-like
16 15 9 0 SCOP 158702 Sec63 N-terminal domain-like
16 9 2 0 SCOP 82615 Polo-box domain
15 13 5 5 SCOP 51556 Metallo-dependent hydrolases
15 15 2 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
15 11 5 2 SCOP 100950 NagB/RpiA/CoA transferase-like
15 15 2 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
15 15 7 2 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
15 15 4 1 SCOP 50891 Cyclophilin-like
15 15 4 1 SCOP 81301 Nucleotidyltransferase
15 15 4 0 SCOP 49879 SMAD/FHA domain
15 15 7 1 SCOP 53920 Fe-only hydrogenase
15 12 8 0 SCOP 49354 PapD-like
15 15 6 0 SCOP 47391 Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
14 12 5 1 SCOP 51161 Trimeric LpxA-like enzymes
14 14 9 1 SCOP 54534 FKBP-like
14 14 7 1 SCOP 82199 SET domain
14 14 3 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
13 13 1 2 SCOP 51569 Aldolase
13 13 3 1 SCOP 55920 Creatinase/aminopeptidase
13 13 5 2 SCOP 52402 Adenine nucleotide alpha hydrolases-like
13 13 3 1 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
13 13 4 0 SCOP 161111 Cation efflux protein transmembrane domain-like
13 13 3 2 SCOP 52467 DHS-like NAD/FAD-binding domain
13 13 4 0 SCOP 50370 Ricin B-like lectins
13 13 11 0 SCOP 101898 NHL repeat
13 13 5 0 SCOP 74788 Cullin repeat-like
12 12 4 0 SCOP 52317 Class I glutamine amidotransferase-like
12 12 4 2 SCOP 53137 Translational machinery components
12 12 2 0 SCOP 52080 Ribosomal proteins L15p and L18e
12 12 2 1 SCOP 55961 Bet v1-like
12 12 2 1 SCOP 52768 Arginase/deacetylase
12 12 3 0 SCOP 144091 Rhomboid-like
12 12 6 1 SCOP 55186 ThrRS/AlaRS common domain
11 10 3 1 SCOP 53167 Purine and uridine phosphorylases
11 11 1 1 SCOP 53784 Phosphofructokinase
11 11 2 0 SCOP 46579 Prefoldin
11 11 4 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
11 11 1 0 SCOP 103196 Roadblock/LC7 domain
11 7 5 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
11 11 4 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
11 10 6 0 SCOP 90229 CCCH zinc finger
11 11 6 0 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
10 10 5 1 SCOP 55120 Pseudouridine synthase
10 10 1 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
10 10 2 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
10 10 3 1 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
10 10 5 0 SCOP 102114 Radical SAM enzymes
10 10 3 1 SCOP 56104 SAICAR synthase-like
10 10 5 0 SCOP 52954 Class II aaRS ABD-related
10 10 8 0 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
10 10 5 0 SCOP 52009 Phosphohistidine domain
10 5 1 0 SCOP 56053 Ribosomal protein L6
10 10 4 0 SCOP 48652 Tetraspanin
10 10 1 1 SCOP 101152 Mob1/phocein
10 10 6 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
9 9 2 0 SCOP 46946 S13-like H2TH domain
9 9 1 0 SCOP 55174 Alpha-L RNA-binding motif
9 9 2 0 SCOP 160369 Ribosomal protein L10-like
9 5 2 0 SCOP 81333 F1F0 ATP synthase subunit C
9 9 4 1 SCOP 52949 Macro domain-like
9 9 3 1 SCOP 48208 Six-hairpin glycosidases
9 9 2 0 SCOP 56399 ADP-ribosylation
9 9 1 0 SCOP 64268 PX domain
9 9 5 0 SCOP 52172 CheY-like
9 8 6 0 SCOP 57783 Zinc beta-ribbon
9 9 2 0 SCOP 57802 Rubredoxin-like
9 9 2 1 SCOP 51604 Enolase C-terminal domain-like
9 5 4 1 SCOP 54980 EF-G C-terminal domain-like
9 9 2 2 SCOP 52922 TK C-terminal domain-like
9 6 5 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
9 9 2 1 SCOP 54826 Enolase N-terminal domain-like
9 9 3 1 SCOP 81631 PAP/OAS1 substrate-binding domain
9 9 1 0 SCOP 47769 SAM/Pointed domain
9 9 6 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
9 9 2 0 SCOP 48464 ENTH/VHS domain
9 8 3 0 SCOP 51045 WW domain
9 9 5 0 SCOP 47212 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
8 8 1 2 SCOP 53613 Ribokinase-like
8 8 1 0 SCOP 56808 Ribosomal protein L1
8 8 2 1 SCOP 54648 DLC
8 8 1 1 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
8 6 3 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
8 8 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
8 8 3 2 SCOP 56601 beta-lactamase/transpeptidase-like
8 8 2 1 SCOP 53795 PEP carboxykinase-like
8 5 4 0 SCOP 55797 PR-1-like
8 8 4 0 SCOP 53955 Lysozyme-like
8 8 4 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
8 4 1 1 SCOP 53901 Thiolase-like
8 8 1 0 SCOP 53092 Creatinase/prolidase N-terminal domain
8 6 2 1 SCOP 55979 DNA clamp
8 8 1 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
8 8 3 0 SCOP 48019 post-AAA+ oligomerization domain-like
8 7 3 1 SCOP 52210 Succinyl-CoA synthetase domains
8 8 2 1 SCOP 55060 GHMP Kinase, C-terminal domain
8 8 7 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
8 8 1 1 SCOP 82109 MIR domain
8 8 5 0 SCOP 50911 Mannose 6-phosphate receptor domain
8 8 5 0 SCOP 75553 Smc hinge domain
8 6 3 0 SCOP 57424 LDL receptor-like module
8 8 2 0 SCOP 101821 Aminopeptidase/glucanase lid domain
7 7 2 1 SCOP 47240 Ferritin-like
7 7 2 1 SCOP 50129 GroES-like
7 7 1 1 SCOP 52161 Ribosomal protein L13
7 7 1 0 SCOP 47060 S15/NS1 RNA-binding domain
7 7 2 1 SCOP 52313 Ribosomal protein S2
7 7 1 1 SCOP 56655 Carbohydrate phosphatase
7 7 1 0 SCOP 54575 Ribosomal protein L31e
7 7 4 0 SCOP 81324 Voltage-gated potassium channels
7 7 1 1 SCOP 103365 Hypothetical protein PH1602
7 7 1 1 SCOP 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
7 7 4 1 SCOP 50939 Sialidases
7 7 1 0 SCOP 116820 Rps17e-like
7 7 3 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
7 7 1 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
7 7 3 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
7 7 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
7 7 4 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
7 7 2 0 SCOP 81891 Poly A polymerase C-terminal region-like
7 7 2 0 SCOP 47895 Transducin (alpha subunit), insertion domain
7 7 1 0 SCOP 48097 Regulator of G-protein signaling, RGS
7 7 1 0 SCOP 54747 Ribosomal L11/L12e N-terminal domain
7 7 1 0 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
7 7 1 1 SCOP 103409 39 kda initiator binding protein, IBP39, C-terminal domains
6 4 2 0 SCOP 53271 PRTase-like
6 6 1 1 SCOP 47973 Ribosomal protein S7
6 6 4 2 SCOP 53697 SIS domain
6 6 1 1 SCOP 50193 Ribosomal protein L14
6 6 1 0 SCOP 55282 RL5-like
6 6 1 1 SCOP 48150 DNA-glycosylase
6 6 2 2 SCOP 51419 PLP-binding barrel
6 6 2 1 SCOP 103506 Mitochondrial carrier
6 6 1 0 SCOP 52042 Ribosomal protein L32e
6 6 2 1 SCOP 53590 Nucleoside hydrolase
6 6 3 0 SCOP 47819 HRDC-like
6 6 1 1 SCOP 48439 Protein prenylyltransferase
6 6 2 2 SCOP 52972 ITPase-like
6 6 2 0 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
6 6 2 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
6 6 1 0 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
6 6 5 0 SCOP 46548 alpha-helical ferredoxin
6 6 1 0 SCOP 54106 LysM domain
6 6 1 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
6 6 1 1 SCOP 68923 PEP carboxykinase N-terminal domain
6 6 2 0 SCOP 50621 Alanine racemase C-terminal domain-like
6 6 4 0 SCOP 68906 SAP domain
6 6 2 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
6 6 3 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
6 4 4 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
6 6 2 0 SCOP 55666 Ribonuclease PH domain 2-like
6 6 5 0 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
6 6 3 0 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
6 6 2 0 SCOP 140612 EB1 dimerisation domain-like
6 6 3 0 SCOP 160897 Taf5 N-terminal domain-like
5 5 1 0 SCOP 54999 Ribosomal protein S10
5 5 1 1 SCOP 54686 Ribosomal protein L16p/L10e
5 5 1 1 SCOP 103491 Preprotein translocase SecY subunit
5 5 2 0 SCOP 51695 PLC-like phosphodiesterases
5 5 1 1 SCOP 51713 tRNA-guanine transglycosylase
5 5 4 0 SCOP 101908 Putative isomerase YbhE
5 5 1 1 SCOP 144000 Oxysterol-binding protein-like
5 5 1 0 SCOP 48662 Ribosomal protein L39e
5 5 3 0 SCOP 58113 Apolipoprotein A-I
5 5 1 1 SCOP 55909 Pentein
5 5 1 0 SCOP 141571 Pentapeptide repeat-like
5 5 2 0 SCOP 102712 JAB1/MPN domain
5 5 1 0 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
5 5 4 0 SCOP 88697 PUA domain-like
5 5 3 0 SCOP 46589 tRNA-binding arm
5 5 4 0 SCOP 51971 Nucleotide-binding domain
5 5 2 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
5 5 1 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
5 5 1 0 SCOP 54768 dsRNA-binding domain-like
5 5 3 0 SCOP 47933 ERP29 C domain-like
5 5 5 0 SCOP 63748 Tudor/PWWP/MBT
5 5 3 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
5 5 3 0 SCOP 110942 HSP90 C-terminal domain
5 5 1 0 SCOP 160527 V-type ATPase subunit E-like
5 5 2 0 SCOP 140586 Dcp2 domain-like
4 4 2 1 SCOP 53927 Cytidine deaminase-like
4 4 2 0 SCOP 54197 HIT-like
4 4 1 1 SCOP 52166 Ribosomal protein L4
4 4 1 0 SCOP 54570 Ribosomal protein S19
4 4 1 0 SCOP 54843 Ribosomal protein L22
4 4 1 1 SCOP 50324 Inorganic pyrophosphatase
4 4 1 0 SCOP 82784 OsmC-like
4 4 1 0 SCOP 89360 HesB-like domain
4 4 1 0 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
4 4 1 0 SCOP 55129 Ribosomal protein L30p/L7e
4 4 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
4 4 1 0 SCOP 48140 Ribosomal protein L19 (L19e)
4 4 3 0 SCOP 89895 FYSH domain
4 3 2 1 SCOP 69645 Arp2/3 complex subunits
4 4 1 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
4 4 3 0 SCOP 88713 Glycoside hydrolase/deacetylase
4 4 2 0 SCOP 55257 RBP11-like subunits of RNA polymerase
4 4 2 0 SCOP 55159 eIF1-like
4 4 4 0 SCOP 101478 ADP-ribosylglycohydrolase
4 4 3 0 SCOP 50692 ADC-like
4 4 1 0 SCOP 54975 Acylphosphatase/BLUF domain-like
4 4 4 0 SCOP 55826 YbaK/ProRS associated domain
4 4 3 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
4 4 1 0 SCOP 50346 PRC-barrel domain
4 4 2 0 SCOP 160374 RplX-like
4 4 1 0 SCOP 69318 Integrin alpha N-terminal domain
4 4 2 0 SCOP 54403 Cystatin/monellin
4 4 4 0 SCOP 69304 Tricorn protease N-terminal domain
4 4 2 0 SCOP 48230 Chondroitin AC/alginate lyase
4 4 4 0 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
4 4 2 0 SCOP 48334 DNA repair protein MutS, domain III
4 4 2 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
4 4 2 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
4 2 1 0 SCOP 55945 TATA-box binding protein-like
4 4 2 0 SCOP 144232 HIT/MYND zinc finger-like
4 4 3 1 SCOP 74924 Cap-Gly domain
4 2 2 0 SCOP 141072 CalX-like
4 4 2 0 SCOP 55394 Bactericidal permeability-increasing protein, BPI
4 4 3 0 SCOP 89837 Doublecortin (DC)
4 4 4 0 SCOP 49599 TRAF domain-like
4 4 1 0 SCOP 116907 Hook domain
4 3 2 0 SCOP 57756 Retrovirus zinc finger-like domains
4 4 1 0 SCOP 109885 I/LWEQ domain
4 4 3 0 SCOP 54585 Cdc48 domain 2-like
4 4 2 1 SCOP 81811 Helical domain of Sec23/24
4 4 3 0 SCOP 109728 Hypothetical protein AF0491, middle domain
3 3 1 1 SCOP 56047 Ribosomal protein S8
3 3 2 1 SCOP 53633 Carbamate kinase-like
3 3 1 0 SCOP 51316 Mss4-like
3 3 1 0 SCOP 56935 Porins
3 3 1 1 SCOP 55298 YjgF-like
3 3 1 1 SCOP 48576 Terpenoid synthases
3 3 2 0 SCOP 56988 Anthrax protective antigen
3 3 1 0 SCOP 50475 FMN-binding split barrel
3 3 1 0 SCOP 103456 Preprotein translocase SecE subunit
3 3 2 1 SCOP 52499 Isochorismatase-like hydrolases
3 3 2 0 SCOP 63393 RNA polymerase subunits
3 3 1 1 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
3 3 3 0 SCOP 52266 SGNH hydrolase
3 3 1 0 SCOP 63562 RPB6/omega subunit-like
3 3 3 0 SCOP 55931 Glutamine synthetase/guanido kinase
3 3 2 0 SCOP 69118 AhpD-like
3 3 1 0 SCOP 118196 YaeB-like
3 3 1 0 SCOP 111352 Ammonium transporter
3 3 1 0 SCOP 55331 Tautomerase/MIF
3 3 3 0 SCOP 58100 Bacterial hemolysins
3 3 1 1 SCOP 64167 SurE-like
3 3 1 1 SCOP 81340 Clc chloride channel
3 3 2 0 SCOP 50800 PK beta-barrel domain-like
3 2 2 0 SCOP 69065 RNase III domain-like
3 3 1 1 SCOP 56821 Prismane protein-like
3 3 1 0 SCOP 56024 Phospholipase D/nuclease
3 3 3 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
3 3 1 0 SCOP 82704 AlbA-like
3 3 2 1 SCOP 89124 Nop domain
3 3 1 0 SCOP 160350 Rnp2-like
3 3 2 1 SCOP 56003 Molybdenum cofactor-binding domain
3 3 1 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
3 3 2 0 SCOP 56176 FAD-binding/transporter-associated domain-like
3 3 1 0 SCOP 103032 Hypothetical protein YwqG
3 3 1 0 SCOP 116726 TrkA C-terminal domain-like
3 3 1 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
3 3 3 0 SCOP 141673 MOSC N-terminal domain-like
3 3 2 1 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
3 3 2 0 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
3 3 3 0 SCOP 117289 Nucleoporin domain
3 3 2 0 SCOP 47794 Rad51 N-terminal domain-like
3 3 2 1 SCOP 47741 CO dehydrogenase ISP C-domain like
3 3 1 0 SCOP 47446 Signal peptide-binding domain
3 3 1 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
3 3 1 1 SCOP 81271 TGS-like
3 3 2 0 SCOP 49854 Spermadhesin, CUB domain
3 3 2 0 SCOP 158573 GINS helical bundle-like
3 3 1 0 SCOP 47938 Functional domain of the splicing factor Prp18
3 3 3 0 SCOP 57889 Cysteine-rich domain
3 3 1 0 SCOP 116846 MIT domain
3 3 1 0 SCOP 57959 Leucine zipper domain
3 3 1 0 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
3 3 1 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
3 3 1 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
3 3 1 0 SCOP 55035 NAD-binding domain of HMG-CoA reductase
2 2 1 1 SCOP 53748 Phosphoglycerate kinase
2 2 2 1 SCOP 82649 SufE/NifU
2 2 1 0 SCOP 75217 alpha/beta knot
2 2 2 0 SCOP 52980 Restriction endonuclease-like
2 2 1 1 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
2 2 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
2 2 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
2 2 2 1 SCOP 50715 Ribosomal protein L25-like
2 2 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
2 2 1 0 SCOP 55387 Frataxin/Nqo15-like
2 2 1 0 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
2 2 2 1 SCOP 50630 Acid proteases
2 2 1 0 SCOP 55144 LigT-like
2 2 1 0 SCOP 144210 Nop10-like SnoRNP
2 2 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
2 2 1 0 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
2 2 1 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
2 2 1 1 SCOP 53056 beta-carbonic anhydrase, cab
2 2 1 0 SCOP 46988 Tubulin chaperone cofactor A
2 2 1 0 SCOP 143447 AMMECR1-like
2 2 1 0 SCOP 111038 YjbQ-like
2 1 1 0 SCOP 46955 Putative DNA-binding domain
2 2 1 1 SCOP 51230 Single hybrid motif
2 2 1 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
2 2 1 0 SCOP 117856 AF0104/ALDC/Ptd012-like
2 2 1 1 SCOP 53213 LigB-like
2 2 1 1 SCOP 50486 FMT C-terminal domain-like
2 2 2 0 SCOP 47781 RuvA domain 2-like
2 2 2 0 SCOP 50974 Nitrous oxide reductase, N-terminal domain
2 2 1 0 SCOP 55136 Probable bacterial effector-binding domain
2 2 1 0 SCOP 47592 SWIB/MDM2 domain
2 2 2 0 SCOP 75708 Chemotaxis phosphatase CheZ
2 2 1 0 SCOP 46950 Double-stranded DNA-binding domain
2 2 2 0 SCOP 55287 RPB5-like RNA polymerase subunit
2 2 1 0 SCOP 143437 THUMP domain-like
2 2 1 0 SCOP 102462 Peptidyl-tRNA hydrolase II
2 2 1 0 SCOP 69695 SRP19
2 2 2 0 SCOP 47616 GST C-terminal domain-like
2 2 1 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
2 2 2 0 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
2 2 2 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
2 2 1 0 SCOP 143865 CorA soluble domain-like
2 2 1 0 SCOP 58042 Outer membrane lipoprotein
2 2 1 0 SCOP 82114 Riboflavin kinase-like
2 2 2 0 SCOP 160443 SMR domain-like
2 2 2 0 SCOP 50405 Actin-crosslinking proteins
2 2 1 0 SCOP 52935 PK C-terminal domain-like
2 2 2 0 SCOP 50965 Galactose oxidase, central domain
2 2 2 0 SCOP 118116 DNA mismatch repair protein MutL
2 2 2 0 SCOP 49464 Carboxypeptidase regulatory domain-like
2 2 2 0 SCOP 160059 PriA/YqbF domain
2 2 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
2 2 1 0 SCOP 142984 Nqo1 middle domain-like
2 2 1 0 SCOP 46966 Spectrin repeat
2 2 2 0 SCOP 81383 F-box domain
2 2 2 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
2 2 2 0 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
2 2 2 0 SCOP 63380 Riboflavin synthase domain-like
2 2 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
2 2 1 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
2 2 2 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
2 2 2 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
2 2 1 1 SCOP 55637 Cell cycle regulatory proteins
2 2 2 0 SCOP 55550 SH2 domain
2 2 1 0 SCOP 140490 Nqo1C-terminal domain-like
2 2 2 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 1 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
2 2 2 0 SCOP 101690 PAZ domain
2 1 1 0 SCOP 109905 Surp module (SWAP domain)
2 2 1 0 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
2 2 1 0 SCOP 144074 E2F-DP heterodimerization region
2 2 2 0 SCOP 88688 Families 57/38 glycoside transferase middle domain
2 2 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
2 2 2 0 SCOP 64593 Intermediate filament protein, coiled coil region
2 2 1 0 SCOP 57774 Microbial and mitochondrial ADK, insert "zinc finger" domain
2 2 2 1 SCOP 50989 Clathrin heavy-chain terminal domain
2 2 2 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
2 2 2 0 SCOP 55277 GYF domain
2 2 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
2 2 1 0 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
2 2 2 0 SCOP 101238 XPC-binding domain
1 1 1 1 SCOP 52141 Uracil-DNA glycosylase-like
1 1 1 1 SCOP 51366 Ribulose-phoshate binding barrel
1 1 1 0 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 0 SCOP 110324 Ribosomal L27 protein-like
1 1 1 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
1 1 1 1 SCOP 47729 IHF-like DNA-binding proteins
1 1 1 0 SCOP 55821 YrdC/RibB
1 1 1 1 SCOP 53720 ALDH-like
1 1 1 0 SCOP 51283 dUTPase-like
1 1 1 0 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
1 1 1 0 SCOP 54285 MoaD/ThiS
1 1 1 0 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
1 1 1 0 SCOP 64518 Phase 1 flagellin
1 1 1 0 SCOP 50685 Barwin-like endoglucanases
1 1 1 0 SCOP 63829 Calcium-dependent phosphotriesterase
1 1 1 0 SCOP 143744 GlcG-like
1 1 1 0 SCOP 81321 Family A G protein-coupled receptor-like
1 1 1 0 SCOP 141678 MAL13P1.257-like
1 1 1 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
1 1 1 1 SCOP 69500 DTD-like
1 1 1 0 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
1 1 1 0 SCOP 142897 TFB5-like
1 1 1 0 SCOP 140718 Mediator hinge subcomplex-like
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 1 SCOP 54506 Diaminopimelate epimerase-like
1 1 1 0 SCOP 56019 The spindle assembly checkpoint protein mad2
1 1 1 1 SCOP 56317 Carbon-nitrogen hydrolase
1 1 1 1 SCOP 118203 Vacuolar ATP synthase subunit C
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 0 SCOP 143870 PF0523-like
1 1 1 1 SCOP 64153 YjeF N-terminal domain-like
1 1 1 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
1 1 1 0 SCOP 46924 RNA polymerase subunit RPB10
1 1 1 0 SCOP 57662 Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
1 1 1 0 SCOP 46458 Globin-like
1 1 1 1 SCOP 101546 ASF1-like
1 1 1 0 SCOP 51998 PFL-like glycyl radical enzymes
1 1 1 0 SCOP 47413 lambda repressor-like DNA-binding domains
1 1 1 0 SCOP 75712 Rad50 coiled-coil Zn hook
1 1 1 0 SCOP 82771 GIY-YIG endonuclease
1 1 1 0 SCOP 56349 DNA breaking-rejoining enzymes
1 1 1 0 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
1 1 1 0 SCOP 101744 Rof/RNase P subunit-like
1 1 1 0 SCOP 54447 ssDNA-binding transcriptional regulator domain
1 1 1 0 SCOP 89550 PHP domain-like
1 1 1 0 SCOP 143990 YbiA-like
1 1 1 0 SCOP 55154 CYTH-like phosphatases
1 1 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 1 0 SCOP 53822 Periplasmic binding protein-like I
1 1 1 0 SCOP 143081 BB1717-like
1 1 1 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
1 1 1 0 SCOP 89028 Cobalamin adenosyltransferase-like
1 1 1 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
1 1 1 0 SCOP 102588 LmbE-like
1 1 1 0 SCOP 103025 Folate-binding domain
1 1 1 0 SCOP 159888 YdhG-like
1 1 1 0 SCOP 140683 SP0561-like
1 1 1 1 SCOP 50814 Lipocalins
1 1 1 0 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
1 1 1 1 SCOP 110738 Glycerate kinase I
1 1 1 0 SCOP 52309 N-(deoxy)ribosyltransferase-like
1 1 1 1 SCOP 110395 CutC-like
1 1 1 0 SCOP 100939 SPOC domain-like
1 1 1 1 SCOP 75005 Arabinanase/levansucrase/invertase
1 1 1 0 SCOP 101082 Typo IV secretion system protein TraC
1 1 1 0 SCOP 56726 DNA topoisomerase IV, alpha subunit
1 1 1 1 SCOP 102198 Putative cyclase
1 1 1 0 SCOP 54984 eEF-1beta-like
1 1 1 0 SCOP 69819 MTH1598-like
1 1 1 1 SCOP 103165 Ta1353-like
1 1 1 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
1 1 1 0 SCOP 158832 Tex N-terminal region-like
1 1 1 0 SCOP 50156 PDZ domain-like
1 1 1 0 SCOP 50960 TolB, C-terminal domain
1 1 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
1 1 1 0 SCOP 63825 YWTD domain
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 58026 Delta-sleep-inducing peptide immunoreactive peptide
1 1 1 0 SCOP 49313 Cadherin-like
1 1 1 1 SCOP 56719 Type II DNA topoisomerase
1 1 1 0 SCOP 144206 NOB1 zinc finger-like
1 1 1 0 SCOP 56436 C-type lectin-like
1 1 1 0 SCOP 56037 PheT/TilS domain
1 1 1 0 SCOP 47090 PGBD-like
1 1 1 0 SCOP 47162 Apolipoprotein
1 1 1 1 SCOP 140990 FtsH protease domain-like
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 0 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
1 1 1 0 SCOP 48431 Lipovitellin-phosvitin complex, superhelical domain
1 1 1 0 SCOP 53155 Methylated DNA-protein cysteine methyltransferase domain
1 1 1 0 SCOP 54373 FAD-linked reductases, C-terminal domain
1 1 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
1 1 1 0 SCOP 101344 Superantigen MAM
1 1 1 0 SCOP 53743 FucI/AraA N-terminal and middle domains
1 1 1 0 SCOP 46557 GreA transcript cleavage protein, N-terminal domain
1 1 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
1 1 1 0 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 0 SCOP 116742 eIF2alpha middle domain-like
1 1 1 0 SCOP 69203 Nucleoplasmin-like core domain
1 1 1 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
1 1 1 1 SCOP 140984 PTPA-like
1 1 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
1 1 1 0 SCOP 81730 beta-catenin-interacting protein ICAT
1 1 1 0 SCOP 140102 ISY1 domain-like
1 1 1 0 SCOP 48340 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
1 1 1 0 SCOP 47050 VHP, Villin headpiece domain
1 1 1 0 SCOP 101233 PWI domain
1 1 1 0 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
1 1 1 0 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
1 1 1 0 SCOP 110993 eIF-2-alpha, C-terminal domain
1 1 1 0 SCOP 140111 Endosomal sorting complex assembly domain
1 1 1 0 SCOP 103243 KA1-like
1 1 1 0 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
1 1 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
1 1 1 0 SCOP 81698 FF domain
1 1 1 0 SCOP 50916 Rap30/74 interaction domains
1 1 1 0 SCOP 81382 Skp1 dimerisation domain-like
1 1 1 0 SCOP 81872 BRCA2 helical domain
1 1 1 1 SCOP 88802 Pre-PUA domain
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 64586 C-terminal domain of ProRS
1 1 1 0 SCOP 89009 GAT-like domain
1 1 1 0 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 0 SCOP 82829 MesJ substrate recognition domain-like
1 1 1 0 SCOP 140914 PriB N-terminal domain-like
1 1 1 0 SCOP 158230 PRP4-like

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The following superfamilies have one or more weak hits:

SCOP superfamily Troponin coil-coiled subunits
SCOP superfamily Head morphogenesis protein gp7
SCOP superfamily Dimerization motif of sir4
SCOP superfamily Neurotransmitter-gated ion-channel transmembrane pore
SCOP superfamily Hypothetical protein YjiA, C-terminal domain
SCOP superfamily Hypothetical protein Yml108w
SCOP superfamily YajQ-like
SCOP superfamily MTH1187/YkoF-like
SCOP superfamily Hypothetical protein VC0424
SCOP superfamily eEF1-gamma domain
SCOP superfamily Proguanylin
SCOP superfamily Mago nashi protein
SCOP superfamily Fucose-specific lectin
SCOP superfamily Collagen-binding domain
SCOP superfamily Gametocyte protein Pfg27
SCOP superfamily TorD-like
SCOP superfamily GatB/YqeY motif
SCOP superfamily Sigma2 domain of RNA polymerase sigma factors
SCOP superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors
SCOP superfamily ssDNA viruses
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily Tumor suppressor gene product Apc
SCOP superfamily Cysteine-rich DNA binding domain, (DM domain)
SCOP superfamily TSP-1 type 1 repeat
SCOP superfamily L-A virus major coat protein
SCOP superfamily R3H domain
SCOP superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
SCOP superfamily SEA domain
SCOP superfamily DAK1/DegV-like
SCOP superfamily Tp47 lipoprotein, N-terminal domain
SCOP superfamily BAH domain
SCOP superfamily Prokaryotic SH3-related domain
SCOP superfamily Viral chemokine binding protein m3
SCOP superfamily Helical scaffold and wing domains of SecA
SCOP superfamily BRCA2 tower domain
SCOP superfamily Family 10 polysaccharide lyase
SCOP superfamily RuBisCo LSMT C-terminal, substrate-binding domain
SCOP superfamily Myosin phosphatase inhibitor 17kDa protein, CPI-17
SCOP superfamily Crustacean CHH/MIH/GIH neurohormone
SCOP superfamily Nucleotidyltransferase substrate binding subunit/domain
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Photosystem I subunits PsaA/PsaB
SCOP superfamily Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily Bacterial photosystem II reaction centre, L and M subunits
SCOP superfamily Bacterial ba3 type cytochrome c oxidase subunit IIa
SCOP superfamily Cytochrome c oxidase subunit II-like, transmembrane region
SCOP superfamily Cytochrome c oxidase subunit III-like
SCOP superfamily Cytochrome c oxidase subunit I-like
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIb
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIa
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIa
SCOP superfamily Fumarate reductase respiratory complex transmembrane subunits
SCOP superfamily Transmembrane di-heme cytochromes
SCOP superfamily F1F0 ATP synthase subunit A
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily Small-conductance potassium channel
SCOP superfamily Adenylylcyclase toxin (the edema factor)
SCOP superfamily H-NS histone-like proteins
SCOP superfamily Mitotic arrest deficient-like 1, Mad1
SCOP superfamily YebC-like
SCOP superfamily Release factor
SCOP superfamily Siroheme synthase middle domains-like
SCOP superfamily Archaeal IMP cyclohydrolase PurO
SCOP superfamily Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
SCOP superfamily Putative transcriptional regulator TM1602, C-terminal domain
SCOP superfamily YhbC-like, N-terminal domain
SCOP superfamily Hypothetical protein MTH1880
SCOP superfamily Plakin repeat
SCOP superfamily Rotavirus NSP2 fragment, C-terminal domain
SCOP superfamily Hypothetical protein MTH777 (MT0777)
SCOP superfamily HprK N-terminal domain-like
SCOP superfamily YhbC-like, C-terminal domain
SCOP superfamily V-region of surface antigen I/II (SA I/II, PAC)
SCOP superfamily Major surface antigen p30, SAG1
SCOP superfamily Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
SCOP superfamily Lamin A/C globular tail domain
SCOP superfamily Translin
SCOP superfamily Variable surface antigen VlsE
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily Colicin E3 receptor domain
SCOP superfamily Eea1 homodimerisation domain
SCOP superfamily Head and neck region of the ectodomain of NDV fusion glycoprotein
SCOP superfamily OMPT-like
SCOP superfamily NSP3 homodimer
SCOP superfamily Argininosuccinate synthetase, C-terminal domain
SCOP superfamily LCCL domain
SCOP superfamily Glutamyl tRNA-reductase catalytic, N-terminal domain
SCOP superfamily DsrC, the gamma subunit of dissimilatory sulfite reductase
SCOP superfamily DNA-binding C-terminal domain of the transcription factor MotA
SCOP superfamily Type III secretory system chaperone-like
SCOP superfamily Cell wall binding repeat
SCOP superfamily Phage tail proteins
SCOP superfamily gp5 N-terminal domain-like
SCOP superfamily Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain
SCOP superfamily Glutamyl tRNA-reductase dimerization domain
SCOP superfamily Hypothetical protein MTH865
SCOP superfamily alpha-ketoacid dehydrogenase kinase, N-terminal domain
SCOP superfamily RecG, N-terminal domain
SCOP superfamily FAD-dependent thiol oxidase
SCOP superfamily FAT domain of focal adhesion kinase
SCOP superfamily Rho N-terminal domain-like
SCOP superfamily F1 ATPase inhibitor, IF1, C-terminal domain
SCOP superfamily DNA-binding domain of intron-encoded endonucleases
SCOP superfamily YopH tyrosine phosphatase N-terminal domain
SCOP superfamily Chorismate lyase-like
SCOP superfamily Prokaryotic ribosomal protein L17
SCOP superfamily Head-to-tail joining protein W, gpW
SCOP superfamily Methuselah ectodomain
SCOP superfamily Ribonuclease domain of colicin E3
SCOP superfamily Sortase
SCOP superfamily Telomeric repeat binding factor (TRF) dimerisation domain
SCOP superfamily PTS-regulatory domain, PRD
SCOP superfamily Outer surface protein C (OspC)
SCOP superfamily BAG domain
SCOP superfamily Type I dockerin domain
SCOP superfamily Fumarylacetoacetate hydrolase, FAH, N-terminal domain
SCOP superfamily Oligomerization domain of hepatitis delta antigen
SCOP superfamily Colicin Ia, N-terminal domain
SCOP superfamily Clostridium neurotoxins, "coiled-coil" domain
SCOP superfamily Variant surface glycoprotein (N-terminal domain)
SCOP superfamily Virus ectodomain
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily N-terminal coiled coil domain from apc
SCOP superfamily Fibritin
SCOP superfamily Multimerization domain of the phosphoprotein from sendai virus
SCOP superfamily Rotavirus nonstructural proteins
SCOP superfamily XRCC4, C-terminal oligomerization domain
SCOP superfamily Coiled-coil dimerization domain from cortexillin I
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Chicken cartilage matrix protein
SCOP superfamily Trimerization domain of TRAF
SCOP superfamily TAZ domain
SCOP superfamily Inhibitor of apoptosis (IAP) repeat
SCOP superfamily Zn-binding domains of ADDBP
SCOP superfamily Ribosomal protein L36
SCOP superfamily Zn2/Cys6 DNA-binding domain
SCOP superfamily Carboxypeptidase inhibitor
SCOP superfamily Heparin-binding domain from vascular endothelial growth factor
SCOP superfamily Blood coagulation inhibitor (disintegrin)
SCOP superfamily Complement control module/SCR domain
SCOP superfamily Trefoil
SCOP superfamily Hairpin loop containing domain-like
SCOP superfamily BPTI-like
SCOP superfamily Amb V allergen
SCOP superfamily EGF/Laminin
SCOP superfamily Insulin-like
SCOP superfamily Perfringolysin
SCOP superfamily Aerolisin/ETX pore-forming domain
SCOP superfamily Lipovitellin-phosvitin complex; beta-sheet shell regions
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily OMPA-like
SCOP superfamily delta-Endotoxin (insectocide), N-terminal domain
SCOP superfamily Colicin
SCOP superfamily Reovirus inner layer core protein p3
SCOP superfamily Upper collar protein gp10 (connector protein)
SCOP superfamily HydB/Nqo4-like
SCOP superfamily Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
SCOP superfamily Acyl-CoA dehydrogenase NM domain-like
SCOP superfamily Heme-dependent catalase-like
SCOP superfamily Replication terminator protein (Tus)
SCOP superfamily Serpins
SCOP superfamily Major capsid protein gp5
SCOP superfamily Baseplate structural protein gp11
SCOP superfamily Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
SCOP superfamily Penicillin binding protein dimerisation domain
SCOP superfamily Methionine synthase activation domain-like
SCOP superfamily gp120 core
SCOP superfamily Fibrinogen C-terminal domain-like
SCOP superfamily Peptide deformylase
SCOP superfamily Ribosome inactivating proteins (RIP)
SCOP superfamily ADC synthase
SCOP superfamily S-adenosylmethionine decarboxylase
SCOP superfamily PurM C-terminal domain-like
SCOP superfamily Monooxygenase (hydroxylase) regulatory protein
SCOP superfamily Ribonuclease Rh-like
SCOP superfamily Sporulation response regulatory protein Spo0B
SCOP superfamily N-acetylmuramoyl-L-alanine amidase-like
SCOP superfamily Phoshotransferase/anion transport protein
SCOP superfamily Mog1p/PsbP-like
SCOP superfamily Tetrahydrobiopterin biosynthesis enzymes-like
SCOP superfamily Homing endonucleases
SCOP superfamily RNA bacteriophage capsid protein
SCOP superfamily PurM N-terminal domain-like
SCOP superfamily tRNA-intron endonuclease N-terminal domain-like
SCOP superfamily C-terminal domain of arginine repressor
SCOP superfamily Translation initiation factor IF3, C-terminal domain
SCOP superfamily Ribosome recycling factor, RRF
SCOP superfamily Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
SCOP superfamily Pepsin inhibitor-3
SCOP superfamily Formylmethanofuran:tetrahydromethanopterin formyltransferase
SCOP superfamily ACT-like
SCOP superfamily Anticodon-binding domain of PheRS
SCOP superfamily Viral DNA-binding domain
SCOP superfamily GlnB-like
SCOP superfamily Protease propeptides/inhibitors
SCOP superfamily RecA protein, C-terminal domain
SCOP superfamily ClpS-like
SCOP superfamily Elongation factor Ts (EF-Ts), dimerisation domain
SCOP superfamily CI-2 family of serine protease inhibitors
SCOP superfamily CBS-domain pair
SCOP superfamily Chalcone isomerase
SCOP superfamily Heme-binding protein A (HasA)
SCOP superfamily Ribosomal protein S16
SCOP superfamily Mitochondrial glycoprotein MAM33-like
SCOP superfamily GFP-like
SCOP superfamily MHC antigen-recognition domain
SCOP superfamily Glutamine synthetase, N-terminal domain
SCOP superfamily Staphylokinase/streptokinase
SCOP superfamily CAD & PB1 domains
SCOP superfamily Prion-like
SCOP superfamily Microbial ribonucleases
SCOP superfamily Periplasmic binding protein-like II
SCOP superfamily "Helical backbone" metal receptor
SCOP superfamily Tetrapyrrole methylase
SCOP superfamily Glutaminase/Asparaginase
SCOP superfamily AraD/HMP-PK domain-like
SCOP superfamily Formyltransferase
SCOP superfamily Peptidyl-tRNA hydrolase-like
SCOP superfamily HybD-like
SCOP superfamily PTS system fructose IIA component-like
SCOP superfamily Resolvase-like
SCOP superfamily ATP synthase (F1-ATPase), gamma subunit
SCOP superfamily PTS system IIB component-like
SCOP superfamily CoA-dependent acyltransferases
SCOP superfamily Hypothetical protein MTH538
SCOP superfamily Toll/Interleukin receptor TIR domain
SCOP superfamily CRAL/TRIO domain
SCOP superfamily Barstar-related
SCOP superfamily Glycosyl hydrolases family 6, cellulases
SCOP superfamily UROD/MetE-like
SCOP superfamily Xylose isomerase-like
SCOP superfamily Malate synthase G
SCOP superfamily LexA/Signal peptidase
SCOP superfamily Hedgehog/intein (Hint) domain
SCOP superfamily Tlp20, baculovirus telokin-like protein
SCOP superfamily Urease, beta-subunit
SCOP superfamily Clavaminate synthase-like
SCOP superfamily Insect cysteine-rich antifreeze protein
SCOP superfamily beta-Roll
SCOP superfamily Mannose-binding lectins
SCOP superfamily delta-Endotoxin (insectocide), middle domain
SCOP superfamily Outer surface protein
SCOP superfamily Bacteriochlorophyll A protein
SCOP superfamily Carbonic anhydrase
SCOP superfamily Peptidase/esterase 'gauge' domain
SCOP superfamily Thermostable phytase (3-phytase)
SCOP superfamily Hemopexin-like domain
SCOP superfamily beta-Barrel protease inhibitors
SCOP superfamily Trypsin-like serine proteases
SCOP superfamily STI-like
SCOP superfamily Agglutinin
SCOP superfamily Cytokine
SCOP superfamily N-terminal domains of the minor coat protein g3p
SCOP superfamily gp9
SCOP superfamily Baculovirus p35 protein
SCOP superfamily Osmotin, thaumatin-like protein
SCOP superfamily TNF-like
SCOP superfamily Virus attachment protein globular domain
SCOP superfamily ENV polyprotein, receptor-binding domain
SCOP superfamily Ecotin, trypsin inhibitor
SCOP superfamily Calpain large subunit, middle domain (domain III)
SCOP superfamily Group II dsDNA viruses VP
SCOP superfamily Rab geranylgeranyltransferase alpha-subunit, insert domain
SCOP superfamily Cupredoxins
SCOP superfamily Cna protein B-type domain
SCOP superfamily Bacterial adhesins
SCOP superfamily Carbohydrate-binding domain
SCOP superfamily Transglutaminase, two C-terminal domains
SCOP superfamily PKD domain
SCOP superfamily Fibronectin type III
SCOP superfamily Immunoglobulin
SCOP superfamily Multiheme cytochromes
SCOP superfamily Moesin tail domain
SCOP superfamily Fe-only hydrogenase smaller subunit
SCOP superfamily Transducin (heterotrimeric G protein), gamma chain
SCOP superfamily Heme oxygenase-like
SCOP superfamily Chorismate mutase II
SCOP superfamily Serum albumin-like
SCOP superfamily Nuclear receptor ligand-binding domain
SCOP superfamily Tetracyclin repressor-like, C-terminal domain
SCOP superfamily gene 59 helicase assembly protein
SCOP superfamily Lipoxigenase
SCOP superfamily Cytochrome c oxidase subunit E
SCOP superfamily Bacterial muramidases
SCOP superfamily A virus capsid protein alpha-helical domain
SCOP superfamily Cytochrome P450
SCOP superfamily Citrate synthase
SCOP superfamily Uteroglobin-like
SCOP superfamily Influenza virus matrix protein M1
SCOP superfamily Heme-dependent peroxidases
SCOP superfamily Carbamoyl phosphate synthetase, large subunit connection domain
SCOP superfamily Transcription factor STAT-4 N-domain
SCOP superfamily Di-copper centre-containing domain
SCOP superfamily Hemocyanin, N-terminal domain
SCOP superfamily Guanido kinase N-terminal domain
SCOP superfamily FliG
SCOP superfamily N-terminal domain of DnaB helicase
SCOP superfamily GntR ligand-binding domain-like
SCOP superfamily DEATH domain
SCOP superfamily Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
SCOP superfamily Annexin
SCOP superfamily Apolipophorin-III
SCOP superfamily Hepatitis B viral capsid (hbcag)
SCOP superfamily Retroviral matrix proteins
SCOP superfamily Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
SCOP superfamily lambda integrase-like, N-terminal domain
SCOP superfamily C-terminal domain of RNA polymerase alpha subunit
SCOP superfamily PAH2 domain
SCOP superfamily Chemotaxis receptor methyltransferase CheR, N-terminal domain
SCOP superfamily Anaphylotoxins (complement system)
SCOP superfamily Transferrin receptor-like dimerisation domain
SCOP superfamily N-terminal domain of cbl (N-cbl)
SCOP superfamily STAT
SCOP superfamily Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
SCOP superfamily Methionine synthase domain
SCOP superfamily Ribbon-helix-helix
SCOP superfamily Domain of poly(ADP-ribose) polymerase
SCOP superfamily Cloroperoxidase
SCOP superfamily Insect pheromone/odorant-binding proteins
SCOP superfamily HLH, helix-loop-helix DNA-binding domain
SCOP superfamily A DNA-binding domain in eukaryotic transcription factors
SCOP superfamily Colicin E immunity proteins
SCOP superfamily ACP-like
SCOP superfamily 4-helical cytokines
SCOP superfamily alpha-catenin/vinculin-like
SCOP superfamily Proteasome activator
SCOP superfamily Acyl-CoA dehydrogenase C-terminal domain-like
SCOP superfamily TMV-like viral coat proteins
SCOP superfamily Hemerythrin-like
SCOP superfamily Cytochromes
SCOP superfamily Aspartate receptor, ligand-binding domain
SCOP superfamily Methane monooxygenase hydrolase, gamma subunit
SCOP superfamily Fertilization protein
SCOP superfamily T4 endonuclease V
SCOP superfamily Cysteine alpha-hairpin motif
SCOP superfamily RAP domain-like
SCOP superfamily Kix domain of CBP (creb binding protein)
SCOP superfamily Bacterial immunoglobulin/albumin-binding domains
SCOP superfamily Ribosomal protein S20
SCOP superfamily Enzyme IIa from lactose specific PTS, IIa-lac
SCOP superfamily CRAL/TRIO N-terminal domain
SCOP superfamily Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
SCOP superfamily Ribosomal protein S18
SCOP superfamily C-terminal effector domain of the bipartite response regulators
SCOP superfamily C-terminal UvrC-binding domain of UvrB
SCOP superfamily HR1 repeat
SCOP superfamily DNA polymerase III theta subunit-like
SCOP superfamily Gam-like
SCOP superfamily Zinc hairpin stack
SCOP superfamily E6 C-terminal domain-like
SCOP superfamily YfgJ-like
SCOP superfamily MetI-like
SCOP superfamily MgtE membrane domain-like
SCOP superfamily SNF-like
SCOP superfamily ATP synthase D chain-like
SCOP superfamily ATP synthase B chain-like
SCOP superfamily PsbZ-like
SCOP superfamily Cytochrome b559 subunits
SCOP superfamily Photosystem II reaction center protein M, PsbM
SCOP superfamily Viral glycoprotein ectodomain-like
SCOP superfamily flu NP-like
SCOP superfamily SSO1389-like
SCOP superfamily AF1531-like
SCOP superfamily MalF N-terminal region-like
SCOP superfamily Poly(A) polymerase catalytic subunit-like
SCOP superfamily PH0156-like
SCOP superfamily FlhC-like
SCOP superfamily PG1388-like
SCOP superfamily Jann2411-like
SCOP superfamily YehR-like
SCOP superfamily YNR034W-A-like
SCOP superfamily FLJ32549 C-terminal domain-like
SCOP superfamily SMI1/KNR4-like
SCOP superfamily MbtH-like
SCOP superfamily BT0923-like
SCOP superfamily YonK-like
SCOP superfamily Ava3019-like
SCOP superfamily YueI-like
SCOP superfamily NMB0513-like
SCOP superfamily BLRF2-like
SCOP superfamily PG1857-like
SCOP superfamily BH3703-like
SCOP superfamily YdfO-like
SCOP superfamily SP0830-like
SCOP superfamily MTH889-like
SCOP superfamily Bacterial polysaccharide co-polymerase-like
SCOP superfamily AMPKBI-like
SCOP superfamily FlaG-like
SCOP superfamily NMB0488-like
SCOP superfamily MM3350-like
SCOP superfamily PH1570-like
SCOP superfamily XkdW-like
SCOP superfamily Cgl1923-like
SCOP superfamily TBP-interacting protein-like
SCOP superfamily XCC0632-like
SCOP superfamily EreA/ChaN-like
SCOP superfamily AttH-like
SCOP superfamily SO1590-like
SCOP superfamily YkvR-like
SCOP superfamily BC4932-like
SCOP superfamily Plus3-like
SCOP superfamily Smr-associated domain-like
SCOP superfamily NEAT domain-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily PMT central region-like
SCOP superfamily AGR C 984p-like
SCOP superfamily HP0242-like
SCOP superfamily LanC-like
SCOP superfamily MG296-like
SCOP superfamily PSPTO4464-like
SCOP superfamily Sama2622-like
SCOP superfamily MtlR-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily Jann4075-like
SCOP superfamily BH3980-like
SCOP superfamily TAFH domain-like
SCOP superfamily FLJ32549 domain-like
SCOP superfamily BH2638-like
SCOP superfamily DnaD domain-like
SCOP superfamily IVS-encoded protein-like
SCOP superfamily Ta0600-like
SCOP superfamily Bacillus cereus metalloprotein-like
SCOP superfamily HP0062-like
SCOP superfamily TM1646-like
SCOP superfamily AF1782-like
SCOP superfamily Efb C-domain-like
SCOP superfamily SOCS box-like
SCOP superfamily occludin/ELL-like
SCOP superfamily Sec2 N-terminal region
SCOP superfamily Eferin C-derminal domain-like
SCOP superfamily MPN010-like
SCOP superfamily CSL zinc finger
SCOP superfamily Magnesium transport protein CorA, transmembrane region
SCOP superfamily Thermophilic metalloprotease-like
SCOP superfamily FdhE-like
SCOP superfamily Peptidoglycan deacetylase N-terminal noncatalytic region
SCOP superfamily L,D-transpeptidase pre-catalytic domain-like
SCOP superfamily UbiD C-terminal domain-like
SCOP superfamily YwmB-like
SCOP superfamily PHP14-like
SCOP superfamily ApbE-like
SCOP superfamily SARS receptor-binding domain-like
SCOP superfamily FwdE-like
SCOP superfamily PUG domain-like
SCOP superfamily TTP0101/SSO1404-like
SCOP superfamily DOPA-like
SCOP superfamily Nqo5-like
SCOP superfamily Rv2632c-like
SCOP superfamily NAP-like
SCOP superfamily TTHA1013/TTHA0281-like
SCOP superfamily WGR domain-like
SCOP superfamily YktB/PF0168-like
SCOP superfamily EndoU-like
SCOP superfamily CAC2185-like
SCOP superfamily NadA-like
SCOP superfamily MFPT repeat-like
SCOP superfamily FimD N-terminal domain-like
SCOP superfamily At5g01610-like
SCOP superfamily PTSIIA/GutA-like
SCOP superfamily BH3618-like
SCOP superfamily GatD N-terminal domain-like
SCOP superfamily Kinase-associated protein B-like
SCOP superfamily Glu-tRNAGln amidotransferase C subunit
SCOP superfamily Hermes dimerisation domain
SCOP superfamily Fic-like
SCOP superfamily Duffy binding domain-like
SCOP superfamily DNA terminal protein
SCOP superfamily TROVE domain-like
SCOP superfamily USP8 N-terminal domain-like
SCOP superfamily Rhabdovirus nucleoprotein-like
SCOP superfamily PG0816-like
SCOP superfamily SipA N-terminal domain-like
SCOP superfamily RUN domain-like
SCOP superfamily PA2201 C-terminal domain-like
SCOP superfamily Phage replication organizer domain
SCOP superfamily IpaD-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily YozE-like
SCOP superfamily Type III secretion system domain
SCOP superfamily HIV integrase-binding domain
SCOP superfamily MukF C-terminal domain-like
SCOP superfamily FlgN-like
SCOP superfamily TM0693-like
SCOP superfamily BAS1536-like
SCOP superfamily MAST3 pre-PK domain-like
SCOP superfamily LemA-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily VPS28 C-terminal domain-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily YppE-like
SCOP superfamily BSD domain-like
SCOP superfamily MIT domain-like
SCOP superfamily Rabenosyn-5 Rab-binding domain-like
SCOP superfamily SPy1572-like
SCOP superfamily Calcyclin-binding protein-like
SCOP superfamily Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain
SCOP superfamily Expressed protein At2g23090/F21P24.15
SCOP superfamily HSP33 redox switch-like
SCOP superfamily AN1-like Zinc finger
SCOP superfamily WRKY DNA-binding domain
SCOP superfamily Connexin43
SCOP superfamily Proton glutamate symport protein
SCOP superfamily RalF, C-terminal domain
SCOP superfamily Band 7/SPFH domain
SCOP superfamily WWE domain
SCOP superfamily TM1631-like
SCOP superfamily Flagellar hook protein flgE
SCOP superfamily Hypothetical protein PA1324
SCOP superfamily DNA primase DnaG, C-terminal domain
SCOP superfamily Hypothetical protein MPN330
SCOP superfamily YfbU-like
SCOP superfamily RNA-binding protein She2p
SCOP superfamily EspA/CesA-like
SCOP superfamily Hypothetical protein YqbG
SCOP superfamily TrmE connector domain
SCOP superfamily Avirulence protein AvrPto
SCOP superfamily XseB-like
SCOP superfamily DNA methylase specificity domain
SCOP superfamily Fzo-like conserved region
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily Geminin coiled-coil domain
SCOP superfamily YAP1 redox domain
SCOP superfamily Pollen allergen ole e 6
SCOP superfamily OmpH-like
SCOP superfamily VP4 membrane interaction domain
SCOP superfamily Tsx-like channel
SCOP superfamily AF1104-like
SCOP superfamily Recombination protein RecR
SCOP superfamily Putative modulator of DNA gyrase, PmbA/TldD
SCOP superfamily Bacillus phage protein
SCOP superfamily Hypothetical protein yfbM
SCOP superfamily Hypothetical protein PF0899
SCOP superfamily Dystroglycan, domain 2
SCOP superfamily Peptidyl-tRNA hydrolase domain-like
SCOP superfamily Hypothetical protein SAV1430
SCOP superfamily Hypothetical protein MTH677
SCOP superfamily GlpP-like
SCOP superfamily Peptidylarginine deiminase Pad4, middle domain
SCOP superfamily ERO1-like
SCOP superfamily Her-1
SCOP superfamily Hypothetical protein MG354
SCOP superfamily Glycolipid transfer protein, GLTP
SCOP superfamily Triger factor/SurA peptide-binding domain-like
SCOP superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
SCOP superfamily Hypothetical protein At3g22680
SCOP superfamily YgfY-like
SCOP superfamily A middle domain of Talin 1
SCOP superfamily NblA-like
SCOP superfamily DinB/YfiT-like putative metalloenzymes
SCOP superfamily CAPPD, an extracellular domain of amyloid beta A4 protein
SCOP superfamily Cag-Z
SCOP superfamily Hypothetical protein D-63
SCOP superfamily Bacteriocin immunity protein-like
SCOP superfamily Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
SCOP superfamily Nickel-containing superoxide dismutase, NiSOD
SCOP superfamily PhoU-like
SCOP superfamily Alpha-hemoglobin stabilizing protein AHSP
SCOP superfamily Glycogen synthesis protein GlgS
SCOP superfamily DEK C-terminal domain
SCOP superfamily KorB DNA-binding domain-like
SCOP superfamily DnaK suppressor protein DksA, alpha-hairpin domain
SCOP superfamily G protein-binding domain
SCOP superfamily TSP type-3 repeat
SCOP superfamily Necrosis inducing protein 1, NIP1
SCOP superfamily Plexin repeat
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily Virulence-associated V antigen
SCOP superfamily 2-methylcitrate dehydratase PrpD
SCOP superfamily Chorismate synthase, AroC
SCOP superfamily Sensory domain-like
SCOP superfamily Tombusvirus P19 core protein, VP19
SCOP superfamily Hypothetical protein c14orf129, hspc210
SCOP superfamily General secretion pathway protein M, EpsM
SCOP superfamily CheC-like
SCOP superfamily Hypothetical protein TT1725
SCOP superfamily Coproporphyrinogen III oxidase
SCOP superfamily mRNA decapping enzyme DcpS N-terminal domain
SCOP superfamily Cell division protein ZapA-like
SCOP superfamily Colicin D/E5 nuclease domain
SCOP superfamily Obg GTP-binding protein C-terminal domain
SCOP superfamily Trigger factor ribosome-binding domain
SCOP superfamily Alpha-2,3/8-sialyltransferase CstII
SCOP superfamily MCP/YpsA-like
SCOP superfamily F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD)
SCOP superfamily (2r)-phospho-3-sulfolactate synthase ComA
SCOP superfamily Trimeric adhesin
SCOP superfamily Adhesin YadA, collagen-binding domain
SCOP superfamily Sema domain
SCOP superfamily GyrA/ParC C-terminal domain-like
SCOP superfamily Apyrase
SCOP superfamily YceI-like
SCOP superfamily Bacterial fluorinating enzyme, C-terminal domain
SCOP superfamily Replicase NSP9
SCOP superfamily Hypothetical protein YgiW
SCOP superfamily Hypothetical protein YfhH
SCOP superfamily Dextranase, N-terminal domain
SCOP superfamily Anti-sigma factor FlgM
SCOP superfamily Stathmin
SCOP superfamily Eukaryotic initiation factor 4f subunit eIF4g, eIF4e-binding domain
SCOP superfamily Hypothetical protein ST1625
SCOP superfamily C-terminal domain of Ku80
SCOP superfamily Hsp90 co-chaperone CDC37
SCOP superfamily all-alpha NTP pyrophosphatases
SCOP superfamily YcfC-like
SCOP superfamily YutG-like
SCOP superfamily Methenyltetrahydrofolate cyclohydrolase-like
SCOP superfamily KaiA/RbsU domain
SCOP superfamily Colicin D immunity protein
SCOP superfamily Flagellar export chaperone FliS
SCOP superfamily Oxygen-evolving enhancer protein 3,
SCOP superfamily Staphylocoagulase
SCOP superfamily Phosphoprotein XD domain
SCOP superfamily B-form DNA mimic Ocr
SCOP superfamily Chemosensory protein Csp2
SCOP superfamily IP3 receptor type 1 binding core, domain 2
SCOP superfamily Kazal-type serine protease inhibitors

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.