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  Home > Genomes > Superfamily assignments for Verticillium albo-atrum VaMs.102


Verticillium albo-atrum VaMs.102 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; sordariomyceta; Sordariomycetes; Hypocreomycetidae; Glomerellales; Plectosphaerellaceae; Verticillium; Verticillium alfalfae; Verticillium alfalfae VaMs.102

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 10220 total
5763 (56 %) with assignment
437 average length
39 % amino acid coverage
Domains: 7980 total
875 unique superfamilies
621 unique families
306 average length
9.1 average superfamily size
89 % formed by duplication
Domain combinations: 637 domain pairs
2116 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
469 378 122 11 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
327 308 8 0 SCOP 103473 MFS general substrate transporter
313 304 47 8 SCOP 51735 NAD(P)-binding Rossmann-fold domains
189 185 17 9 SCOP 53474 alpha/beta-Hydrolases
163 142 31 5 SCOP 51905 FAD/NAD(P)-binding domain
157 156 29 2 SCOP 56112 Protein kinase-like (PK-like)
154 154 7 0 SCOP 57701 Zn2/Cys6 DNA-binding domain
136 114 44 11 SCOP 48371 ARM repeat
125 125 41 8 SCOP 51445 (Trans)glycosidases
121 115 28 1 SCOP 50978 WD40 repeat-like
103 103 10 10 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
84 67 30 1 SCOP 48403 Ankyrin repeat
84 66 23 1 SCOP 54928 RNA-binding domain, RBD
77 66 28 1 SCOP 57850 RING/U-box
73 54 23 2 SCOP 48452 TPR-like
71 71 7 1 SCOP 48264 Cytochrome P450
68 38 13 3 SCOP 53067 Actin-like ATPase domain
67 51 28 6 SCOP 50249 Nucleic acid-binding proteins
66 58 17 5 SCOP 52833 Thioredoxin-like
61 55 9 5 SCOP 51126 Pectin lyase-like
60 57 10 5 SCOP 53383 PLP-dependent transferases
60 51 25 1 SCOP 56801 Acetyl-CoA synthetase-like
58 58 9 1 SCOP 50129 GroES-like
53 16 16 2 SCOP 52777 CoA-dependent acyltransferases
52 43 7 0 SCOP 57667 beta-beta-alpha zinc fingers
52 52 12 1 SCOP 54373 FAD-linked reductases, C-terminal domain
51 51 15 6 SCOP 56784 HAD-like
51 51 6 3 SCOP 51197 Clavaminate synthase-like
49 46 25 0 SCOP 46785 "Winged helix" DNA-binding domain
48 48 10 6 SCOP 49899 Concanavalin A-like lectins/glucanases
46 45 14 3 SCOP 53187 Zn-dependent exopeptidases
44 43 7 5 SCOP 48208 Six-hairpin glycosidases
43 27 25 0 SCOP 47336 ACP-like
43 25 9 0 SCOP 90123 ABC transporter transmembrane region
42 42 10 3 SCOP 53448 Nucleotide-diphospho-sugar transferases
41 40 8 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
39 21 13 0 SCOP 52113 BRCT domain
37 37 15 5 SCOP 54001 Cysteine proteinases
37 37 8 2 SCOP 56176 FAD-binding/transporter-associated domain-like
36 36 6 1 SCOP 103506 Mitochondrial carrier
36 36 3 1 SCOP 51430 NAD(P)-linked oxidoreductase
36 35 22 2 SCOP 50729 PH domain-like
31 30 6 2 SCOP 53720 ALDH-like
30 30 6 3 SCOP 56300 Metallo-dependent phosphatases
30 30 4 8 SCOP 51182 RmlC-like cupins
30 21 15 1 SCOP 53901 Thiolase-like
30 30 16 0 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
29 27 15 1 SCOP 54236 Ubiquitin-like
28 28 14 3 SCOP 53098 Ribonuclease H-like
28 27 20 6 SCOP 54211 Ribosomal protein S5 domain 2-like
27 24 8 1 SCOP 46689 Homeodomain-like
27 24 19 6 SCOP 49785 Galactose-binding domain-like
27 23 13 0 SCOP 50044 SH3-domain
27 25 9 2 SCOP 75005 Arabinanase/levansucrase/invertase
26 25 11 4 SCOP 51556 Metallo-dependent hydrolases
26 26 7 6 SCOP 51569 Aldolase
26 17 11 6 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
26 26 9 4 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
26 25 7 4 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
26 25 8 1 SCOP 54495 UBC-like
26 23 16 1 SCOP 47473 EF-hand
26 22 11 0 SCOP 57903 FYVE/PHD zinc finger
25 24 15 4 SCOP 52374 Nucleotidylyl transferase
25 25 5 1 SCOP 51395 FMN-linked oxidoreductases
25 24 16 0 SCOP 52151 FabD/lysophospholipase-like
24 24 17 2 SCOP 55681 Class II aaRS and biotin synthetases
24 15 8 1 SCOP 47954 Cyclin-like
23 22 8 3 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
23 20 6 3 SCOP 52096 ClpP/crotonase
23 23 18 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
23 23 12 0 SCOP 46565 Chaperone J-domain
23 23 10 1 SCOP 52743 Subtilisin-like
23 23 10 1 SCOP 81665 Calcium ATPase, transmembrane domain M
23 11 10 1 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
22 22 8 2 SCOP 53254 Phosphoglycerate mutase-like
22 22 9 0 SCOP 82199 SET domain
22 22 8 0 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
21 16 9 1 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
21 21 14 0 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
21 10 7 1 SCOP 49503 Cupredoxins
21 21 9 1 SCOP 51011 Glycosyl hydrolase domain
21 21 11 0 SCOP 81383 F-box domain
21 21 13 0 SCOP 57180 Cellulose-binding domain
20 19 9 1 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
20 20 7 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
20 20 14 0 SCOP 63380 Riboflavin synthase domain-like
20 11 4 1 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
20 20 7 1 SCOP 81653 Calcium ATPase, transduction domain A
19 18 13 3 SCOP 56059 Glutathione synthetase ATP-binding domain-like
19 19 9 3 SCOP 52317 Class I glutamine amidotransferase-like
19 19 4 1 SCOP 56281 Metallo-hydrolase/oxidoreductase
19 19 4 1 SCOP 50630 Acid proteases
19 18 6 0 SCOP 54909 Dimeric alpha+beta barrel
18 16 13 0 SCOP 103657 BAR/IMD domain-like
18 18 4 2 SCOP 47113 Histone-fold
18 18 5 3 SCOP 53649 Alkaline phosphatase-like
18 17 10 3 SCOP 74650 Galactose mutarotase-like
18 18 6 0 SCOP 52266 SGNH hydrolase
18 6 5 1 SCOP 63411 LuxS/MPP-like metallohydrolase
18 8 8 0 SCOP 57016 Plant lectins/antimicrobial peptides
17 13 8 4 SCOP 100950 NagB/RpiA/CoA transferase-like
17 17 14 0 SCOP 81296 E set domains
17 16 13 2 SCOP 50447 Translation proteins
17 17 10 5 SCOP 52467 DHS-like NAD/FAD-binding domain
16 15 5 1 SCOP 75304 Amidase signature (AS) enzymes
16 15 7 3 SCOP 54427 NTF2-like
16 9 4 0 SCOP 82153 FAS1 domain
16 16 3 3 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
16 15 13 0 SCOP 46934 UBA-like
16 9 7 0 SCOP 57756 Retrovirus zinc finger-like domains
15 12 7 1 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
15 14 8 0 SCOP 55811 Nudix
15 15 14 0 SCOP 52172 CheY-like
15 13 4 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
15 8 7 1 SCOP 56024 Phospholipase D/nuclease
15 8 4 1 SCOP 54416 Amine oxidase N-terminal region
14 14 6 0 SCOP 50182 Sm-like ribonucleoproteins
14 14 8 0 SCOP 54695 POZ domain
14 14 8 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
14 10 8 0 SCOP 55785 PYP-like sensor domain (PAS domain)
14 14 6 0 SCOP 117281 Kelch motif
14 14 4 0 SCOP 57959 Leucine zipper domain
14 11 7 0 SCOP 51045 WW domain
13 13 8 3 SCOP 64356 SNARE-like
13 13 6 1 SCOP 56219 DNase I-like
13 13 9 1 SCOP 88697 PUA domain-like
13 9 9 0 SCOP 55021 ACT-like
13 13 7 0 SCOP 47616 GST C-terminal domain-like
13 6 5 0 SCOP 54106 LysM domain
13 8 6 0 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
12 10 7 2 SCOP 53271 PRTase-like
12 12 7 1 SCOP 50104 Translation proteins SH3-like domain
12 12 7 1 SCOP 51695 PLC-like phosphodiesterases
12 10 6 1 SCOP 51161 Trimeric LpxA-like enzymes
12 12 5 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
12 10 8 2 SCOP 52799 (Phosphotyrosine protein) phosphatases II
12 11 7 1 SCOP 50891 Cyclophilin-like
12 10 5 3 SCOP 48113 Heme-dependent peroxidases
12 12 7 1 SCOP 64268 PX domain
12 12 11 0 SCOP 49879 SMAD/FHA domain
12 12 7 1 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
12 12 9 2 SCOP 48350 GTPase activation domain, GAP
12 12 7 1 SCOP 52025 PA domain
11 11 8 2 SCOP 52402 Adenine nucleotide alpha hydrolases-like
11 11 3 2 SCOP 51316 Mss4-like
11 11 3 4 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
11 11 6 0 SCOP 52047 RNI-like
11 10 7 0 SCOP 52058 L domain-like
11 8 7 1 SCOP 54631 CBS-domain pair
11 11 10 1 SCOP 53300 vWA-like
11 6 6 1 SCOP 54980 EF-G C-terminal domain-like
10 10 5 3 SCOP 56672 DNA/RNA polymerases
10 10 3 0 SCOP 54897 Protease propeptides/inhibitors
10 10 7 1 SCOP 88713 Glycoside hydrolase/deacetylase
10 6 6 0 SCOP 55008 HMA, heavy metal-associated domain
10 9 7 1 SCOP 81301 Nucleotidyltransferase
10 10 5 1 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
10 10 9 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
10 10 3 2 SCOP 52029 GroEL apical domain-like
10 9 9 0 SCOP 54160 Chromo domain-like
10 10 10 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
10 10 8 1 SCOP 48464 ENTH/VHS domain
10 6 5 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
9 9 3 1 SCOP 53167 Purine and uridine phosphorylases
9 9 4 2 SCOP 53613 Ribokinase-like
9 8 5 1 SCOP 54197 HIT-like
9 9 6 1 SCOP 55920 Creatinase/aminopeptidase
9 7 4 2 SCOP 48557 L-aspartase-like
9 9 5 1 SCOP 58038 SNARE fusion complex
9 9 4 1 SCOP 50475 FMN-binding split barrel
9 8 4 2 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
9 8 5 1 SCOP 56317 Carbon-nitrogen hydrolase
9 9 5 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
9 9 2 1 SCOP 56601 beta-lactamase/transpeptidase-like
9 7 4 0 SCOP 81901 HCP-like
9 9 2 1 SCOP 48592 GroEL equatorial domain-like
9 9 4 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
9 7 5 0 SCOP 90229 CCCH zinc finger
9 9 4 0 SCOP 54556 Chitinase insertion domain
8 8 4 1 SCOP 53927 Cytidine deaminase-like
8 7 4 1 SCOP 53850 Periplasmic binding protein-like II
8 7 5 1 SCOP 52821 Rhodanese/Cell cycle control phosphatase
8 8 2 1 SCOP 55298 YjgF-like
8 7 4 1 SCOP 47095 HMG-box
8 6 5 1 SCOP 55753 Actin depolymerizing proteins
8 8 6 0 SCOP 52954 Class II aaRS ABD-related
8 7 4 3 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
8 8 4 1 SCOP 52016 LeuD/IlvD-like
8 8 8 0 SCOP 51230 Single hybrid motif
8 4 4 0 SCOP 51206 cAMP-binding domain-like
8 7 4 1 SCOP 51338 Composite domain of metallo-dependent hydrolases
8 6 2 1 SCOP 89796 CoA-transferase family III (CaiB/BaiF)
8 8 4 2 SCOP 49452 Starch-binding domain-like
8 4 4 0 SCOP 69318 Integrin alpha N-terminal domain
8 8 7 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
8 8 6 2 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
8 8 7 1 SCOP 81995 beta-sandwich domain of Sec23/24
8 7 7 1 SCOP 52440 PreATP-grasp domain
8 7 5 1 SCOP 48225 Seven-hairpin glycosidases
8 8 4 1 SCOP 49998 Amine oxidase catalytic domain
8 8 7 1 SCOP 54768 dsRNA-binding domain-like
8 7 6 1 SCOP 47370 Bromodomain
8 5 4 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
8 8 1 0 SCOP 54849 GroEL-intermediate domain like
7 7 4 0 SCOP 57829 Zn-binding ribosomal proteins
7 7 1 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
7 5 2 0 SCOP 81333 F1F0 ATP synthase subunit C
7 7 4 2 SCOP 48576 Terpenoid synthases
7 7 4 2 SCOP 55315 L30e-like
7 4 4 1 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
7 7 6 1 SCOP 88723 PIN domain-like
7 5 2 2 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
7 6 4 1 SCOP 144000 Oxysterol-binding protein-like
7 7 4 1 SCOP 56529 FAH
7 7 3 2 SCOP 52768 Arginase/deacetylase
7 7 6 2 SCOP 55931 Glutamine synthetase/guanido kinase
7 7 6 0 SCOP 161111 Cation efflux protein transmembrane domain-like
7 5 5 0 SCOP 69065 RNase III domain-like
7 7 4 1 SCOP 82171 DPP6 N-terminal domain-like
7 7 6 1 SCOP 50965 Galactose oxidase, central domain
7 7 3 0 SCOP 48056 Di-copper centre-containing domain
6 6 4 1 SCOP 81606 PP2C-like
6 5 3 3 SCOP 51366 Ribulose-phoshate binding barrel
6 6 4 1 SCOP 55120 Pseudouridine synthase
6 6 6 1 SCOP 52218 Flavoproteins
6 6 4 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
6 6 5 1 SCOP 48150 DNA-glycosylase
6 6 3 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
6 5 2 1 SCOP 56655 Carbohydrate phosphatase
6 6 4 1 SCOP 50685 Barwin-like endoglucanases
6 6 3 1 SCOP 50985 RCC1/BLIP-II
6 6 5 1 SCOP 56104 SAICAR synthase-like
6 5 5 0 SCOP 63829 Calcium-dependent phosphotriesterase
6 6 3 1 SCOP 81321 Family A G protein-coupled receptor-like
6 6 2 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
6 6 4 1 SCOP 54534 FKBP-like
6 6 2 0 SCOP 46579 Prefoldin
6 4 4 1 SCOP 54506 Diaminopimelate epimerase-like
6 6 2 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
6 6 3 0 SCOP 49777 PEBP-like
6 5 4 1 SCOP 50494 Trypsin-like serine proteases
6 5 4 0 SCOP 57783 Zinc beta-ribbon
6 2 2 0 SCOP 50199 Staphylococcal nuclease
6 6 6 1 SCOP 51246 Rudiment single hybrid motif
6 6 3 1 SCOP 55103 FAD-linked oxidases, C-terminal domain
6 6 2 1 SCOP 47661 t-snare proteins
6 6 5 2 SCOP 52922 TK C-terminal domain-like
6 6 6 0 SCOP 48334 DNA repair protein MutS, domain III
6 2 1 0 SCOP 141086 Agglutinin HPA-like
6 6 4 0 SCOP 144232 HIT/MYND zinc finger-like
6 6 3 0 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
6 6 4 0 SCOP 48065 DBL homology domain (DH-domain)
6 6 2 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
6 6 4 1 SCOP 52087 CRAL/TRIO domain
6 6 4 1 SCOP 56204 Hect, E3 ligase catalytic domain
6 6 3 0 SCOP 55455 SRF-like
6 6 3 0 SCOP 48097 Regulator of G-protein signaling, RGS
5 5 4 1 SCOP 53137 Translational machinery components
5 5 2 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
5 5 3 1 SCOP 51730 FAD-linked oxidoreductase
5 5 4 1 SCOP 102114 Radical SAM enzymes
5 5 3 0 SCOP 49764 HSP20-like chaperones
5 5 2 2 SCOP 109604 HD-domain/PDEase-like
5 5 3 1 SCOP 52499 Isochorismatase-like hydrolases
5 5 3 0 SCOP 57997 Tropomyosin
5 5 5 1 SCOP 55781 GAF domain-like
5 5 5 1 SCOP 47576 Calponin-homology domain, CH-domain
5 5 2 0 SCOP 144091 Rhomboid-like
5 2 2 0 SCOP 81324 Voltage-gated potassium channels
5 5 4 1 SCOP 49482 Aromatic compound dioxygenase
5 5 5 1 SCOP 50022 ISP domain
5 5 2 1 SCOP 53732 Aconitase iron-sulfur domain
5 5 5 1 SCOP 103025 Folate-binding domain
5 5 2 2 SCOP 51604 Enolase C-terminal domain-like
5 4 4 0 SCOP 47781 RuvA domain 2-like
5 5 4 2 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
5 5 3 1 SCOP 52490 Tubulin nucleotide-binding domain-like
5 5 3 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
5 5 2 1 SCOP 49344 CBD9-like
5 5 4 1 SCOP 48019 post-AAA+ oligomerization domain-like
5 4 4 0 SCOP 51971 Nucleotide-binding domain
5 5 4 1 SCOP 55060 GHMP Kinase, C-terminal domain
5 5 2 0 SCOP 57863 ArfGap/RecO-like zinc finger
5 5 3 1 SCOP 54616 DNA-binding domain of Mlu1-box binding protein MBP1
5 5 4 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
5 5 3 0 SCOP 46938 CRAL/TRIO N-terminal domain
5 4 4 1 SCOP 158702 Sec63 N-terminal domain-like
5 5 4 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
5 5 2 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
5 5 3 2 SCOP 74788 Cullin repeat-like
5 5 4 0 SCOP 47769 SAM/Pointed domain
5 4 4 0 SCOP 57889 Cysteine-rich domain
4 4 2 1 SCOP 81338 Aquaporin-like
4 4 2 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
4 4 2 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
4 4 2 1 SCOP 51658 Xylose isomerase-like
4 4 4 0 SCOP 54292 2Fe-2S ferredoxin-like
4 4 3 1 SCOP 56796 Dehydroquinate synthase-like
4 4 3 1 SCOP 51419 PLP-binding barrel
4 4 1 0 SCOP 144122 Tim10-like
4 3 3 1 SCOP 48256 Citrate synthase
4 4 2 1 SCOP 56815 Sec1/munc18-like (SM) proteins
4 4 3 1 SCOP 56634 Heme-dependent catalase-like
4 4 4 0 SCOP 47819 HRDC-like
4 4 4 1 SCOP 140959 Indolic compounds 2,3-dioxygenase-like
4 4 4 0 SCOP 161219 CHY zinc finger-like
4 4 3 1 SCOP 55961 Bet v1-like
4 4 3 1 SCOP 56399 ADP-ribosylation
4 4 3 0 SCOP 69118 AhpD-like
4 4 3 0 SCOP 52091 SpoIIaa-like
4 4 2 1 SCOP 51679 Bacterial luciferase-like
4 4 3 0 SCOP 55797 PR-1-like
4 4 2 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
4 4 4 1 SCOP 55186 ThrRS/AlaRS common domain
4 4 3 0 SCOP 53092 Creatinase/prolidase N-terminal domain
4 4 1 0 SCOP 143865 CorA soluble domain-like
4 3 3 1 SCOP 55979 DNA clamp
4 4 3 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
4 4 1 0 SCOP 48230 Chondroitin AC/alginate lyase
4 3 3 0 SCOP 49265 Fibronectin type III
4 4 3 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
4 4 1 1 SCOP 54826 Enolase N-terminal domain-like
4 4 3 1 SCOP 51989 Glycosyl hydrolases family 6, cellulases
4 4 3 1 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
4 4 2 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
4 4 3 1 SCOP 81631 PAP/OAS1 substrate-binding domain
4 2 2 0 SCOP 56053 Ribosomal protein L6
4 4 1 0 SCOP 117892 Band 7/SPFH domain
4 2 2 1 SCOP 53738 Phosphoglucomutase, first 3 domains
4 4 3 0 SCOP 143975 IlvD/EDD N-terminal domain-like
4 4 3 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
4 4 2 0 SCOP 82708 R3H domain
4 4 3 1 SCOP 101152 Mob1/phocein
4 4 3 0 SCOP 46774 ARID-like
4 4 2 0 SCOP 158573 GINS helical bundle-like
4 4 4 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
4 4 3 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
4 4 4 0 SCOP 75553 Smc hinge domain
3 3 2 1 SCOP 56808 Ribosomal protein L1
3 3 3 2 SCOP 53697 SIS domain
3 3 3 0 SCOP 52080 Ribosomal proteins L15p and L18e
3 3 3 0 SCOP 46946 S13-like H2TH domain
3 2 2 0 SCOP 56214 4'-phosphopantetheinyl transferase
3 3 1 0 SCOP 53597 Dihydrofolate reductase-like
3 3 2 1 SCOP 47240 Ferritin-like
3 3 3 0 SCOP 110324 Ribosomal L27 protein-like
3 3 3 0 SCOP 55174 Alpha-L RNA-binding motif
3 3 1 1 SCOP 82549 DAK1/DegV-like
3 3 3 1 SCOP 75217 alpha/beta knot
3 3 3 0 SCOP 53633 Carbamate kinase-like
3 3 3 1 SCOP 54862 4Fe-4S ferredoxins
3 2 2 0 SCOP 64005 Undecaprenyl diphosphate synthase
3 3 2 1 SCOP 55205 EPT/RTPC-like
3 3 3 0 SCOP 82657 BolA-like
3 3 3 1 SCOP 52949 Macro domain-like
3 3 3 0 SCOP 48613 Heme oxygenase-like
3 3 2 0 SCOP 140718 Mediator hinge subcomplex-like
3 3 3 1 SCOP 53590 Nucleoside hydrolase
3 3 3 0 SCOP 53328 Formyltransferase
3 3 1 1 SCOP 56322 ADC synthase
3 3 2 0 SCOP 51306 LexA/Signal peptidase
3 3 3 1 SCOP 49329 Cu,Zn superoxide dismutase-like
3 2 2 1 SCOP 69645 Arp2/3 complex subunits
3 3 2 0 SCOP 55257 RBP11-like subunits of RNA polymerase
3 3 2 1 SCOP 55418 eIF4e-like
3 3 2 2 SCOP 55909 Pentein
3 2 2 2 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
3 3 3 1 SCOP 46458 Globin-like
3 3 2 1 SCOP 51069 Carbonic anhydrase
3 3 2 0 SCOP 102712 JAB1/MPN domain
3 2 2 0 SCOP 46955 Putative DNA-binding domain
3 3 2 1 SCOP 111352 Ammonium transporter
3 2 2 2 SCOP 56266 DmpA/ArgJ-like
3 3 3 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
3 3 3 0 SCOP 50692 ADC-like
3 3 2 0 SCOP 64167 SurE-like
3 3 2 0 SCOP 81340 Clc chloride channel
3 3 2 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
3 3 2 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
3 3 2 0 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
3 3 3 1 SCOP 52335 Methylglyoxal synthase-like
3 3 2 1 SCOP 161070 SNF-like
3 3 1 0 SCOP 101473 DhaL-like
3 3 1 0 SCOP 50939 Sialidases
3 3 1 0 SCOP 50974 Nitrous oxide reductase, N-terminal domain
3 3 2 0 SCOP 160104 Acetoacetate decarboxylase-like
3 3 2 0 SCOP 102198 Putative cyclase
3 3 1 1 SCOP 89124 Nop domain
3 3 3 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
3 3 2 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
3 2 2 0 SCOP 50156 PDZ domain-like
3 3 2 0 SCOP 160443 SMR domain-like
3 2 2 1 SCOP 48537 Phospholipase C/P1 nuclease
3 3 2 0 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
3 3 2 1 SCOP 52210 Succinyl-CoA synthetase domains
3 3 1 1 SCOP 55307 Tubulin C-terminal domain-like
3 3 2 1 SCOP 140990 FtsH protease domain-like
3 3 2 0 SCOP 53623 MurD-like peptide ligases, catalytic domain
3 3 3 0 SCOP 68906 SAP domain
3 2 2 1 SCOP 56042 PurM C-terminal domain-like
3 3 3 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
3 3 3 0 SCOP 51322 Cyanovirin-N
3 2 2 1 SCOP 55326 PurM N-terminal domain-like
3 3 3 0 SCOP 117289 Nucleoporin domain
3 3 3 1 SCOP 48366 Ras GEF
3 3 3 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
3 2 2 0 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
3 2 2 0 SCOP 118310 AN1-like Zinc finger
3 3 3 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
3 3 2 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
3 3 3 1 SCOP 49348 Clathrin adaptor appendage domain
3 3 2 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
3 3 3 0 SCOP 55271 DNA repair protein MutS, domain I
3 3 2 0 SCOP 81271 TGS-like
3 3 2 0 SCOP 49417 p53-like transcription factors
3 3 3 0 SCOP 54277 CAD & PB1 domains
3 3 2 1 SCOP 48445 14-3-3 protein
3 3 2 1 SCOP 47874 Annexin
3 3 1 0 SCOP 82109 MIR domain
3 3 3 0 SCOP 109993 VPS9 domain
3 2 2 0 SCOP 101690 PAZ domain
3 3 3 1 SCOP 48425 Sec7 domain
3 3 2 1 SCOP 75632 Cullin homology domain
3 3 2 0 SCOP 50911 Mannose 6-phosphate receptor domain
3 3 2 0 SCOP 54368 Glutamine synthetase, N-terminal domain
3 3 1 0 SCOP 101751 Hydrophobin II, HfbII
3 3 2 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
3 1 1 0 SCOP 47762 PAH2 domain
3 3 2 0 SCOP 55666 Ribonuclease PH domain 2-like
3 3 2 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
3 3 3 1 SCOP 54585 Cdc48 domain 2-like
3 3 3 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
3 3 3 0 SCOP 89009 GAT-like domain
3 3 3 1 SCOP 81811 Helical domain of Sec23/24
3 3 3 0 SCOP 53150 DNA repair protein MutS, domain II
3 3 2 0 SCOP 117100 Beta-galactosidase LacA, domain 3
2 2 2 1 SCOP 47973 Ribosomal protein S7
2 2 1 0 SCOP 52141 Uracil-DNA glycosylase-like
2 2 2 0 SCOP 54999 Ribosomal protein S10
2 2 2 1 SCOP 52166 Ribosomal protein L4
2 2 1 0 SCOP 54570 Ribosomal protein S19
2 2 2 0 SCOP 54843 Ribosomal protein L22
2 2 2 1 SCOP 54686 Ribosomal protein L16p/L10e
2 2 1 1 SCOP 50193 Ribosomal protein L14
2 2 2 1 SCOP 55282 RL5-like
2 2 1 0 SCOP 56047 Ribosomal protein S8
2 2 2 0 SCOP 64182 DHH phosphoesterases
2 1 1 1 SCOP 53784 Phosphofructokinase
2 2 1 1 SCOP 75620 Release factor
2 2 2 1 SCOP 50324 Inorganic pyrophosphatase
2 2 2 1 SCOP 52980 Restriction endonuclease-like
2 2 1 0 SCOP 160369 Ribosomal protein L10-like
2 2 2 0 SCOP 52161 Ribosomal protein L13
2 2 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
2 2 2 1 SCOP 55821 YrdC/RibB
2 2 2 1 SCOP 51713 tRNA-guanine transglycosylase
2 2 1 1 SCOP 50715 Ribosomal protein L25-like
2 2 2 1 SCOP 52313 Ribosomal protein S2
2 2 1 0 SCOP 54285 MoaD/ThiS
2 2 1 0 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
2 2 2 0 SCOP 55129 Ribosomal protein L30p/L7e
2 2 2 0 SCOP 56988 Anthrax protective antigen
2 2 2 0 SCOP 143744 GlcG-like
2 2 1 1 SCOP 51726 UROD/MetE-like
2 2 2 2 SCOP 46626 Cytochrome c
2 2 2 0 SCOP 47027 Acyl-CoA binding protein
2 2 1 0 SCOP 63393 RNA polymerase subunits
2 2 2 1 SCOP 53774 Glutaminase/Asparaginase
2 2 1 2 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
2 2 2 1 SCOP 56019 The spindle assembly checkpoint protein mad2
2 2 2 1 SCOP 48439 Protein prenylyltransferase
2 2 2 1 SCOP 52972 ITPase-like
2 2 2 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
2 2 2 0 SCOP 47072 Cysteine alpha-hairpin motif
2 2 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
2 2 2 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
2 2 1 1 SCOP 53056 beta-carbonic anhydrase, cab
2 2 2 0 SCOP 64153 YjeF N-terminal domain-like
2 2 1 1 SCOP 143113 NAP-like
2 2 2 1 SCOP 101546 ASF1-like
2 2 2 1 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
2 2 2 0 SCOP 89550 PHP domain-like
2 2 1 0 SCOP 143990 YbiA-like
2 2 2 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
2 2 1 0 SCOP 109854 DinB/YfiT-like putative metalloenzymes
2 1 1 1 SCOP 53218 Molybdenum cofactor biosynthesis proteins
2 1 1 1 SCOP 50956 Thermostable phytase (3-phytase)
2 2 2 1 SCOP 50800 PK beta-barrel domain-like
2 2 1 1 SCOP 53213 LigB-like
2 2 2 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
2 2 2 0 SCOP 89095 GatB/YqeY motif
2 2 2 0 SCOP 140931 Fic-like
2 2 2 0 SCOP 69322 Tricorn protease domain 2
2 2 1 0 SCOP 50814 Lipocalins
2 2 2 0 SCOP 51219 TRAP-like
2 2 1 1 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
2 2 1 0 SCOP 142764 YgbK-like
2 2 2 1 SCOP 100939 SPOC domain-like
2 2 2 0 SCOP 47592 SWIB/MDM2 domain
2 2 2 1 SCOP 53933 Microbial ribonucleases
2 2 1 1 SCOP 74784 Translin
2 2 2 1 SCOP 46548 alpha-helical ferredoxin
2 2 2 1 SCOP 55895 Ribonuclease Rh-like
2 2 2 0 SCOP 46589 tRNA-binding arm
2 2 2 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
2 2 2 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
2 2 2 0 SCOP 101898 NHL repeat
2 2 2 0 SCOP 48619 Phospholipase A2, PLA2
2 2 1 0 SCOP 82114 Riboflavin kinase-like
2 2 1 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
2 2 1 0 SCOP 160991 CV3147-like
2 2 2 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
2 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
2 1 1 0 SCOP 90257 Myosin rod fragments
2 1 1 0 SCOP 55658 L9 N-domain-like
2 2 1 0 SCOP 160059 PriA/YqbF domain
2 2 2 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
2 2 2 0 SCOP 51294 Hedgehog/intein (Hint) domain
2 1 1 0 SCOP 46966 Spectrin repeat
2 2 2 0 SCOP 81585 PsbU/PolX domain-like
2 2 2 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
2 2 2 1 SCOP 143548 Serine metabolism enzymes domain
2 2 2 0 SCOP 90209 Ran binding protein zinc finger-like
2 2 2 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
2 2 1 1 SCOP 56327 LDH C-terminal domain-like
2 2 1 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
2 2 2 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
2 2 2 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
2 2 2 0 SCOP 55945 TATA-box binding protein-like
2 2 2 0 SCOP 63748 Tudor/PWWP/MBT
2 2 2 0 SCOP 74924 Cap-Gly domain
2 2 2 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
2 2 2 0 SCOP 144284 Sec2 N-terminal region
2 2 2 1 SCOP 110221 AbfB domain
2 2 2 0 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
2 2 1 1 SCOP 69000 FAD-dependent thiol oxidase
2 2 2 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
2 2 1 0 SCOP 55394 Bactericidal permeability-increasing protein, BPI
2 2 1 0 SCOP 47895 Transducin (alpha subunit), insertion domain
2 2 2 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
2 2 2 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
2 2 1 1 SCOP 140984 PTPA-like
2 2 2 0 SCOP 49599 TRAF domain-like
2 2 2 0 SCOP 69012 alpha-ketoacid dehydrogenase kinase, N-terminal domain
2 2 2 0 SCOP 109905 Surp module (SWAP domain)
2 2 2 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
2 2 1 0 SCOP 47672 Transferrin receptor-like dimerisation domain
2 2 2 0 SCOP 88688 Families 57/38 glycoside transferase middle domain
2 2 2 0 SCOP 101233 PWI domain
2 2 2 0 SCOP 46585 HR1 repeat
2 2 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
2 2 2 0 SCOP 140111 Endosomal sorting complex assembly domain
2 2 2 0 SCOP 103243 KA1-like
2 2 2 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
2 2 2 0 SCOP 81698 FF domain
2 2 2 0 SCOP 109715 DEK C-terminal domain
2 2 2 0 SCOP 50916 Rap30/74 interaction domains
2 2 2 0 SCOP 46942 Elongation factor TFIIS domain 2
2 2 2 0 SCOP 89000 post-HMGL domain-like
2 2 2 0 SCOP 55277 GYF domain
2 2 2 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
2 1 1 0 SCOP 82615 Polo-box domain
2 1 1 0 SCOP 49758 Calpain large subunit, middle domain (domain III)
2 2 2 1 SCOP 101790 Aminomethyltransferase beta-barrel domain
2 2 2 0 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
2 2 2 0 SCOP 82919 Zn-finger domain of Sec23/24
2 2 1 0 SCOP 57879 Zinc domain conserved in yeast copper-regulated transcription factors
1 1 1 0 SCOP 53790 Tetrapyrrole methylase
1 1 1 0 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 0 SCOP 141091 L21p-like
1 1 1 0 SCOP 143800 L28p-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 75625 YebC-like
1 1 1 1 SCOP 82649 SufE/NifU
1 1 1 1 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
1 1 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
1 1 1 0 SCOP 82784 OsmC-like
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 1 SCOP 51283 dUTPase-like
1 1 1 0 SCOP 89360 HesB-like domain
1 1 1 0 SCOP 56770 HydA/Nqo6-like
1 1 1 1 SCOP 56276 S-adenosylmethionine decarboxylase
1 1 1 1 SCOP 142695 RibA-like
1 1 1 1 SCOP 52304 Type II 3-dehydroquinate dehydratase
1 1 1 0 SCOP 54060 His-Me finger endonucleases
1 1 1 1 SCOP 52121 Lumazine synthase
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 1 SCOP 55387 Frataxin/Nqo15-like
1 1 1 0 SCOP 89957 MTH1187/YkoF-like
1 1 1 0 SCOP 48140 Ribosomal protein L19 (L19e)
1 1 1 1 SCOP 144217 CSL zinc finger
1 1 1 0 SCOP 52042 Ribosomal protein L32e
1 1 1 1 SCOP 55469 FMN-dependent nitroreductase-like
1 1 1 0 SCOP 141678 MAL13P1.257-like
1 1 1 0 SCOP 54575 Ribosomal protein L31e
1 1 1 0 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
1 1 1 1 SCOP 69500 DTD-like
1 1 1 0 SCOP 103464 Oligosaccharyltransferase subunit ost4p
1 1 1 0 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
1 1 1 1 SCOP 102886 Coproporphyrinogen III oxidase
1 1 1 0 SCOP 142897 TFB5-like
1 1 1 0 SCOP 103456 Preprotein translocase SecE subunit
1 1 1 1 SCOP 54648 DLC
1 1 1 1 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 1 SCOP 57798 Casein kinase II beta subunit
1 1 1 0 SCOP 111278 SSo0622-like
1 1 1 0 SCOP 81411 Mitochondrial cytochrome c oxidase subunit VIa
1 1 1 0 SCOP 81406 Mitochondrial cytochrome c oxidase subunit IV
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 0 SCOP 81514 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 55144 LigT-like
1 1 1 0 SCOP 55248 PCD-like
1 1 1 0 SCOP 57868 Metallothionein
1 1 1 0 SCOP 89895 FYSH domain
1 1 1 0 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
1 1 1 0 SCOP 51645 Malate synthase G
1 1 1 0 SCOP 81508 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 48662 Ribosomal protein L39e
1 1 1 0 SCOP 53639 AraD/HMP-PK domain-like
1 1 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
1 1 1 1 SCOP 118203 Vacuolar ATP synthase subunit C
1 1 1 0 SCOP 82282 Homocysteine S-methyltransferase
1 1 1 0 SCOP 47694 Cytochrome c oxidase subunit h
1 1 1 1 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 0 SCOP 143870 PF0523-like
1 1 1 1 SCOP 55159 eIF1-like
1 1 1 1 SCOP 103111 Activator of Hsp90 ATPase, Aha1
1 1 1 0 SCOP 58113 Apolipoprotein A-I
1 1 1 0 SCOP 55770 Profilin (actin-binding protein)
1 1 1 1 SCOP 46924 RNA polymerase subunit RPB10
1 1 1 0 SCOP 46988 Tubulin chaperone cofactor A
1 1 1 0 SCOP 69618 HemD-like
1 1 1 0 SCOP 143447 AMMECR1-like
1 1 1 0 SCOP 48690 Epsilon subunit of mitochondrial F1F0-ATP synthase
1 1 1 1 SCOP 103378 2-methylcitrate dehydratase PrpD
1 1 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
1 1 1 1 SCOP 63562 RPB6/omega subunit-like
1 1 1 1 SCOP 53800 Chelatase
1 1 1 0 SCOP 141734 HisI-like
1 1 1 0 SCOP 161084 MAPEG domain-like
1 1 1 0 SCOP 111038 YjbQ-like
1 1 1 0 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 1 1 SCOP 102405 MCP/YpsA-like
1 1 1 1 SCOP 143243 Nqo5-like
1 1 1 1 SCOP 51717 Dihydropteroate synthetase-like
1 1 1 1 SCOP 51998 PFL-like glycyl radical enzymes
1 1 1 0 SCOP 55718 SCP-like
1 1 1 0 SCOP 55724 Mog1p/PsbP-like
1 1 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 0 SCOP 55331 Tautomerase/MIF
1 1 1 0 SCOP 47413 lambda repressor-like DNA-binding domains
1 1 1 0 SCOP 58100 Bacterial hemolysins
1 1 1 1 SCOP 56349 DNA breaking-rejoining enzymes
1 1 1 1 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 0 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
1 1 1 0 SCOP 101744 Rof/RNase P subunit-like
1 1 1 0 SCOP 54447 ssDNA-binding transcriptional regulator domain
1 1 1 1 SCOP 89733 L-sulfolactate dehydrogenase-like
1 1 1 0 SCOP 117782 YbjQ-like
1 1 1 0 SCOP 55154 CYTH-like phosphatases
1 1 1 0 SCOP 54913 GlnB-like
1 1 1 0 SCOP 143410 DOPA-like
1 1 1 1 SCOP 56762 HydB/Nqo4-like
1 1 1 0 SCOP 54736 ClpS-like
1 1 1 0 SCOP 53955 Lysozyme-like
1 1 1 0 SCOP 69047 Hypothetical protein YjbJ
1 1 1 0 SCOP 54111 Urease, gamma-subunit
1 1 1 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 143081 BB1717-like
1 1 1 0 SCOP 159245 AttH-like
1 1 1 0 SCOP 158997 Trm112p-like
1 1 1 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
1 1 1 0 SCOP 81330 Gated mechanosensitive channel
1 1 1 1 SCOP 48600 Chorismate mutase II
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 0 SCOP 49472 Transthyretin (synonym: prealbumin)
1 1 1 0 SCOP 158694 UraD-Like
1 1 1 1 SCOP 118215 Proton glutamate symport protein
1 1 1 0 SCOP 160909 ATP12-like
1 1 1 0 SCOP 101386 all-alpha NTP pyrophosphatases
1 1 1 0 SCOP 56747 Prim-pol domain
1 1 1 1 SCOP 110581 Indigoidine synthase A-like
1 1 1 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
1 1 1 0 SCOP 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
1 1 1 0 SCOP 57802 Rubredoxin-like
1 1 1 0 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
1 1 1 0 SCOP 110738 Glycerate kinase I
1 1 1 0 SCOP 142338 CofD-like
1 1 1 0 SCOP 50486 FMT C-terminal domain-like
1 1 1 0 SCOP 141130 Acetamidase/Formamidase-like
1 1 1 0 SCOP 69786 YggU-like
1 1 1 0 SCOP 103196 Roadblock/LC7 domain
1 1 1 0 SCOP 64076 MTH938-like
1 1 1 0 SCOP 140736 Rv1873-like
1 1 1 1 SCOP 110395 CutC-like
1 1 1 0 SCOP 89562 RraA-like
1 1 1 0 SCOP 56726 DNA topoisomerase IV, alpha subunit
1 1 1 1 SCOP 160920 PSTPO5379-like
1 1 1 0 SCOP 46950 Double-stranded DNA-binding domain
1 1 1 0 SCOP 111321 AF1104-like
1 1 1 0 SCOP 160350 Rnp2-like
1 1 1 1 SCOP 54984 eEF-1beta-like
1 1 1 1 SCOP 55287 RPB5-like RNA polymerase subunit
1 1 1 0 SCOP 143437 THUMP domain-like
1 1 1 0 SCOP 116820 Rps17e-like
1 1 1 0 SCOP 160374 RplX-like
1 1 1 0 SCOP 69695 SRP19
1 1 1 0 SCOP 63867 MoeA C-terminal domain-like
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 1 SCOP 56003 Molybdenum cofactor-binding domain
1 1 1 0 SCOP 158832 Tex N-terminal region-like
1 1 1 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
1 1 1 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
1 1 1 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
1 1 1 0 SCOP 50960 TolB, C-terminal domain
1 1 1 0 SCOP 49695 gamma-Crystallin-like
1 1 1 0 SCOP 50370 Ricin B-like lectins
1 1 1 0 SCOP 89372 Fucose-specific lectin
1 1 1 0 SCOP 81923 Double Clp-N motif
1 1 1 0 SCOP 50405 Actin-crosslinking proteins
1 1 1 0 SCOP 102645 CoaB-like
1 1 1 0 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
1 1 1 0 SCOP 142921 WGR domain-like
1 1 1 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 1 SCOP 56719 Type II DNA topoisomerase
1 1 1 0 SCOP 55234 Cyanase C-terminal domain
1 1 1 0 SCOP 81573 F1F0 ATP synthase subunit B, membrane domain
1 1 1 1 SCOP 52935 PK C-terminal domain-like
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 52129 Caspase-like
1 1 1 0 SCOP 144206 NOB1 zinc finger-like
1 1 1 0 SCOP 158745 LanC-like
1 1 1 0 SCOP 68923 PEP carboxykinase N-terminal domain
1 1 1 0 SCOP 56436 C-type lectin-like
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 56037 PheT/TilS domain
1 1 1 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
1 1 1 0 SCOP 75704 Mitotic arrest deficient-like 1, Mad1
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
1 1 1 0 SCOP 141673 MOSC N-terminal domain-like
1 1 1 0 SCOP 142984 Nqo1 middle domain-like
1 1 1 0 SCOP 110111 Ctag/Cox11
1 1 1 1 SCOP 110019 ERO1-like
1 1 1 1 SCOP 49870 Osmotin, thaumatin-like protein
1 1 1 0 SCOP 52075 Outer arm dynein light chain 1
1 1 1 1 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
1 1 1 0 SCOP 81891 Poly A polymerase C-terminal region-like
1 1 1 0 SCOP 53920 Fe-only hydrogenase
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
1 1 1 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 0 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
1 1 1 1 SCOP 101596 Dextranase, N-terminal domain
1 1 1 0 SCOP 51101 Mannose-binding lectins
1 1 1 0 SCOP 49354 PapD-like
1 1 1 0 SCOP 110836 Hypothetical protein SAV1430
1 1 1 0 SCOP 49299 PKD domain
1 1 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
1 1 1 1 SCOP 63882 MoeA N-terminal region -like
1 1 1 1 SCOP 55637 Cell cycle regulatory proteins
1 1 1 0 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
1 1 1 0 SCOP 47794 Rad51 N-terminal domain-like
1 1 1 0 SCOP 140860 Pseudo ankyrin repeat-like
1 1 1 1 SCOP 47741 CO dehydrogenase ISP C-domain like
1 1 1 0 SCOP 47933 ERP29 C domain-like
1 1 1 0 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
1 1 1 0 SCOP 55550 SH2 domain
1 1 1 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 140490 Nqo1C-terminal domain-like
1 1 1 1 SCOP 81837 BEACH domain
1 1 1 1 SCOP 47446 Signal peptide-binding domain
1 1 1 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 82061 BAH domain
1 1 1 1 SCOP 116742 eIF2alpha middle domain-like
1 1 1 0 SCOP 57845 B-box zinc-binding domain
1 1 1 1 SCOP 89817 Mago nashi protein
1 1 1 0 SCOP 48670 Transducin (heterotrimeric G protein), gamma chain
1 1 1 0 SCOP 111347 Rap/Ran-GAP
1 1 1 0 SCOP 63570 PABC (PABP) domain
1 1 1 0 SCOP 47938 Functional domain of the splicing factor Prp18
1 1 1 0 SCOP 57924 Inhibitor of apoptosis (IAP) repeat
1 1 1 0 SCOP 116846 MIT domain
1 1 1 0 SCOP 110004 Glycolipid transfer protein, GLTP
1 1 1 0 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
1 1 1 0 SCOP 50084 Myosin S1 fragment, N-terminal domain
1 1 1 0 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
1 1 1 0 SCOP 161065 ATP synthase D chain-like
1 1 1 0 SCOP 140102 ISY1 domain-like
1 1 1 0 SCOP 81531 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 116907 Hook domain
1 1 1 0 SCOP 103107 Hypothetical protein c14orf129, hspc210
1 1 1 0 SCOP 140856 USP8 N-terminal domain-like
1 1 1 0 SCOP 57414 Hairpin loop containing domain-like
1 1 1 0 SCOP 140361 MIT domain-like
1 1 1 0 SCOP 63491 BAG domain
1 1 1 0 SCOP 48479 Cytochrome c oxidase subunit E
1 1 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
1 1 1 1 SCOP 109885 I/LWEQ domain
1 1 1 0 SCOP 143791 DUSP-like
1 1 1 0 SCOP 110083 Peptidylarginine deiminase Pad4, middle domain
1 1 1 0 SCOP 57095 Scorpion toxin-like
1 1 1 0 SCOP 54529 Mitochondrial glycoprotein MAM33-like
1 1 1 0 SCOP 57552 Blood coagulation inhibitor (disintegrin)
1 1 1 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
1 1 1 0 SCOP 110942 HSP90 C-terminal domain
1 1 1 0 SCOP 49590 PHL pollen allergen
1 1 1 0 SCOP 161060 ATP synthase B chain-like
1 1 1 1 SCOP 110993 eIF-2-alpha, C-terminal domain
1 1 1 0 SCOP 89942 eEF1-gamma domain
1 1 1 0 SCOP 47571 Cloroperoxidase
1 1 1 0 SCOP 143885 RGC domain-like
1 1 1 0 SCOP 75615 Siroheme synthase middle domains-like
1 1 1 0 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
1 1 1 0 SCOP 101489 Eukaryotic initiation factor 4f subunit eIF4g, eIF4e-binding domain
1 1 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 0 SCOP 160527 V-type ATPase subunit E-like
1 1 1 0 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
1 1 1 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
1 1 1 0 SCOP 47157 Mitochondrial import receptor subunit Tom20
1 1 1 0 SCOP 111430 YAP1 redox domain
1 1 1 1 SCOP 50989 Clathrin heavy-chain terminal domain
1 1 1 0 SCOP 81822 RuBisCo LSMT C-terminal, substrate-binding domain
1 1 1 0 SCOP 101391 Hsp90 co-chaperone CDC37
1 1 1 1 SCOP 47212 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
1 1 1 1 SCOP 81382 Skp1 dimerisation domain-like
1 1 1 0 SCOP 140427 VPS28 C-terminal domain-like
1 1 1 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
1 1 1 1 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
1 1 1 0 SCOP 159042 Plus3-like
1 1 1 0 SCOP 88802 Pre-PUA domain
1 1 1 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
1 1 1 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
1 1 1 0 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
1 1 1 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
1 1 1 0 SCOP 161245 Zinc hairpin stack
1 1 1 0 SCOP 140612 EB1 dimerisation domain-like
1 1 1 0 SCOP 102860 mRNA decapping enzyme DcpS N-terminal domain
1 1 1 0 SCOP 101420 C-terminal domain of Ku80
1 1 1 0 SCOP 160897 Taf5 N-terminal domain-like
1 1 1 0 SCOP 116878 TrmE connector domain
1 1 1 0 SCOP 64586 C-terminal domain of ProRS
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 140383 BSD domain-like
1 1 1 0 SCOP 160219 AMPKBI-like
1 1 1 1 SCOP 140586 Dcp2 domain-like
1 1 1 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 0 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
1 1 1 0 SCOP 81502 ISP transmembrane anchor
1 1 1 0 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
1 1 1 0 SCOP 117125 Putative glucosidase YicI, C-terminal domain
1 1 1 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
1 1 1 0 SCOP 109736 FGAM synthase PurL, linker domain
1 1 1 0 SCOP 47587 Domain of poly(ADP-ribose) polymerase
1 1 1 0 SCOP 101238 XPC-binding domain
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
1 1 1 0 SCOP 140125 Rabenosyn-5 Rab-binding domain-like
1 1 1 0 SCOP 158230 PRP4-like
1 1 1 0 SCOP 143026 Kinetochore globular domain

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The following superfamilies have one or more weak hits:

SCOP superfamily Troponin coil-coiled subunits
SCOP superfamily Zinc finger domain of DNA polymerase-alpha
SCOP superfamily Neurotransmitter-gated ion-channel transmembrane pore
SCOP superfamily Hypothetical protein VC0424
SCOP superfamily Inhibitor of vertebrate lysozyme, Ivy
SCOP superfamily Adsorption protein p2
SCOP superfamily Gametocyte protein Pfg27
SCOP superfamily Sigma2 domain of RNA polymerase sigma factors
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily GIY-YIG endonuclease
SCOP superfamily AlbA-like
SCOP superfamily Nuclease A inhibitor (NuiA)
SCOP superfamily Viral chemokine binding protein m3
SCOP superfamily Cytochrome c oxidase subunit III-like
SCOP superfamily Cytochrome c oxidase subunit I-like
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIc
SCOP superfamily ABC transporter involved in vitamin B12 uptake, BtuC
SCOP superfamily F1F0 ATP synthase subunit A
SCOP superfamily Small-conductance potassium channel
SCOP superfamily Adenylylcyclase toxin (the edema factor)
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Chemotaxis phosphatase CheZ
SCOP superfamily VSV matrix protein
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily LCCL domain
SCOP superfamily gp5 N-terminal domain-like
SCOP superfamily Nucleoplasmin-like core domain
SCOP superfamily Glutamyl tRNA-reductase dimerization domain
SCOP superfamily F1 ATPase inhibitor, IF1, C-terminal domain
SCOP superfamily Phase 1 flagellin
SCOP superfamily Pyridoxine 5'-phosphate synthase
SCOP superfamily YWTD domain
SCOP superfamily LEM domain
SCOP superfamily MurE/MurF N-terminal domain
SCOP superfamily Variant surface glycoprotein (N-terminal domain)
SCOP superfamily Outer membrane lipoprotein
SCOP superfamily XRCC4, C-terminal oligomerization domain
SCOP superfamily Carboxypeptidase inhibitor
SCOP superfamily Type X cellulose binding domain, CBDX
SCOP superfamily LDL receptor-like module
SCOP superfamily EGF/Laminin
SCOP superfamily Growth factor receptor domain
SCOP superfamily Aerolisin/ETX pore-forming domain
SCOP superfamily Lipovitellin-phosvitin complex; beta-sheet shell regions
SCOP superfamily Leukocidin-like
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily Porins
SCOP superfamily Light-harvesting complex subunits
SCOP superfamily delta-Endotoxin (insectocide), N-terminal domain
SCOP superfamily Serpins
SCOP superfamily Conserved core of transcriptional regulatory protein vp16
SCOP superfamily gp120 core
SCOP superfamily Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
SCOP superfamily Ribosome recycling factor, RRF
SCOP superfamily Acylphosphatase/BLUF domain-like
SCOP superfamily CI-2 family of serine protease inhibitors
SCOP superfamily Periplasmic binding protein-like I
SCOP superfamily "Helical backbone" metal receptor
SCOP superfamily N-(deoxy)ribosyltransferase-like
SCOP superfamily delta-Endotoxin (insectocide), middle domain
SCOP superfamily Peptidase/esterase 'gauge' domain
SCOP superfamily Agglutinin
SCOP superfamily C-terminal domain of transcriptional repressors
SCOP superfamily Ecotin, trypsin inhibitor
SCOP superfamily Neurophysin II
SCOP superfamily alpha-Amylase inhibitor tendamistat
SCOP superfamily Bacterial adhesins
SCOP superfamily Cadherin-like
SCOP superfamily Immunoglobulin
SCOP superfamily Multiheme cytochromes
SCOP superfamily Tetraspanin
SCOP superfamily Bacterial muramidases
SCOP superfamily FliG
SCOP superfamily GntR ligand-binding domain-like
SCOP superfamily DEATH domain
SCOP superfamily Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
SCOP superfamily Apolipophorin-III
SCOP superfamily Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
SCOP superfamily STAT
SCOP superfamily Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
SCOP superfamily Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
SCOP superfamily Bacterial GAP domain
SCOP superfamily Cytochromes
SCOP superfamily Apolipoprotein
SCOP superfamily S15/NS1 RNA-binding domain
SCOP superfamily Kix domain of CBP (creb binding protein)
SCOP superfamily Smac/diablo
SCOP superfamily C-terminal UvrC-binding domain of UvrB
SCOP superfamily GreA transcript cleavage protein, N-terminal domain
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily MetI-like
SCOP superfamily PsbZ-like
SCOP superfamily VPA0735-like
SCOP superfamily Jann2411-like
SCOP superfamily Phosphoprotein oligomerization domain-like
SCOP superfamily Rv2827c C-terminal domain-like
SCOP superfamily Lp2179-like
SCOP superfamily YNR034W-A-like
SCOP superfamily NMB0513-like
SCOP superfamily BLRF2-like
SCOP superfamily EspE N-terminal domain-like
SCOP superfamily YdhG-like
SCOP superfamily CbiG N-terminal domain-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily TerB-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily PG0775 C-terminal domain-like
SCOP superfamily HAMP domain-like
SCOP superfamily TM1646-like
SCOP superfamily MPN010-like
SCOP superfamily Vanabin-like
SCOP superfamily Heme iron utilization protein-like
SCOP superfamily FdhE-like
SCOP superfamily L,D-transpeptidase pre-catalytic domain-like
SCOP superfamily Phage tail protein-like
SCOP superfamily YojJ-like
SCOP superfamily L35p-like
SCOP superfamily ComB-like
SCOP superfamily NadA-like
SCOP superfamily YccV-like
SCOP superfamily ICP-like
SCOP superfamily Glu-tRNAGln amidotransferase C subunit
SCOP superfamily TROVE domain-like
SCOP superfamily Phage replication organizer domain
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily Type III secretion system domain
SCOP superfamily EsxAB dimer-like
SCOP superfamily IscX-like
SCOP superfamily Expressed protein At2g23090/F21P24.15
SCOP superfamily Connexin43
SCOP superfamily Viral ssDNA binding protein
SCOP superfamily LEA14-like
SCOP superfamily Avirulence protein AvrPto
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily Hormone receptor domain
SCOP superfamily OmpH-like
SCOP superfamily HlyD-like secretion proteins
SCOP superfamily CbiD-like
SCOP superfamily Recombination protein RecR
SCOP superfamily Hemolytic lectin CEL-III, C-terminal domain
SCOP superfamily Hypothetical protein MG354
SCOP superfamily CAPPD, an extracellular domain of amyloid beta A4 protein
SCOP superfamily HBS1-like domain
SCOP superfamily TSP type-3 repeat
SCOP superfamily Sec-C motif
SCOP superfamily Chlorophyll a-b binding protein
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily Hypothetical protein PH1602
SCOP superfamily Putative isomerase YbhE
SCOP superfamily Stathmin
SCOP superfamily ADP-ribosylglycohydrolase
SCOP superfamily Superantigen MAM
SCOP superfamily YcfC-like
SCOP superfamily Plant invertase/pectin methylesterase inhibitor
SCOP superfamily Colicin D immunity protein
SCOP superfamily Typo IV secretion system protein TraC
SCOP superfamily Chemosensory protein Csp2

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.