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  Home > Genomes > Superfamily assignments for Glycine max v109


Glycine max v109 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 55787 total
36697 (66 %) with assignment
407 average length
46 % amino acid coverage
Domains: 51734 total
972 unique superfamilies
823 unique families
286 average length
53.2 average superfamily size
98 % formed by duplication
Domain combinations: 1078 domain pairs
3997 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
2851 2466 289 12 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
2655 2643 162 4 SCOP 56112 Protein kinase-like (PK-like)
1619 1248 172 2 SCOP 52058 L domain-like
1194 1130 106 3 SCOP 57850 RING/U-box
1074 1008 42 3 SCOP 46689 Homeodomain-like
920 665 72 1 SCOP 54928 RNA-binding domain, RBD
916 758 97 10 SCOP 48371 ARM repeat
898 877 63 8 SCOP 51735 NAD(P)-binding Rossmann-fold domains
816 633 76 2 SCOP 48452 TPR-like
738 735 24 8 SCOP 53474 alpha/beta-Hydrolases
662 559 29 16 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
624 587 69 1 SCOP 50978 WD40 repeat-like
601 506 112 0 SCOP 52047 RNI-like
587 514 43 4 SCOP 52833 Thioredoxin-like
526 526 48 0 SCOP 81383 F-box domain
504 497 48 8 SCOP 51445 (Trans)glycosidases
475 455 7 0 SCOP 103473 MFS general substrate transporter
449 425 43 1 SCOP 47473 EF-hand
448 397 16 1 SCOP 54171 DNA-binding domain
445 435 58 4 SCOP 46785 "Winged helix" DNA-binding domain
439 435 8 1 SCOP 48264 Cytochrome P450
429 424 12 5 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
414 206 14 3 SCOP 49503 Cupredoxins
414 414 8 0 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
405 403 44 8 SCOP 56784 HAD-like
384 302 62 5 SCOP 50249 Nucleic acid-binding proteins
381 376 19 3 SCOP 51197 Clavaminate synthase-like
368 256 13 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
363 272 54 4 SCOP 54236 Ubiquitin-like
336 292 68 4 SCOP 53098 Ribonuclease H-like
327 277 24 0 SCOP 57667 beta-beta-alpha zinc fingers
321 265 33 5 SCOP 51905 FAD/NAD(P)-binding domain
320 221 39 1 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
300 300 14 5 SCOP 53448 Nucleotide-diphospho-sugar transferases
289 289 10 3 SCOP 51126 Pectin lyase-like
288 277 42 1 SCOP 48403 Ankyrin repeat
279 278 31 9 SCOP 54001 Cysteine proteinases
278 146 26 4 SCOP 53067 Actin-like ATPase domain
271 269 35 1 SCOP 46565 Chaperone J-domain
261 260 22 3 SCOP 49899 Concanavalin A-like lectins/glucanases
259 124 34 0 SCOP 90229 CCCH zinc finger
258 224 57 0 SCOP 57903 FYVE/PHD zinc finger
255 245 14 5 SCOP 53383 PLP-dependent transferases
241 107 29 1 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
239 187 19 1 SCOP 55961 Bet v1-like
234 234 24 1 SCOP 50630 Acid proteases
231 230 4 1 SCOP 48113 Heme-dependent peroxidases
230 196 8 1 SCOP 118290 WRKY DNA-binding domain
229 151 18 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
228 228 10 1 SCOP 81606 PP2C-like
221 131 12 1 SCOP 47954 Cyclin-like
218 218 18 0 SCOP 54277 CAD & PB1 domains
210 198 79 4 SCOP 56672 DNA/RNA polymerases
207 166 17 0 SCOP 55008 HMA, heavy metal-associated domain
203 192 35 0 SCOP 52200 Toll/Interleukin receptor TIR domain
195 181 8 6 SCOP 51182 RmlC-like cupins
192 192 3 0 SCOP 55455 SRF-like
192 192 3 1 SCOP 101941 NAC domain
190 104 20 1 SCOP 90123 ABC transporter transmembrane region
186 164 17 1 SCOP 101936 DNA-binding pseudobarrel domain
185 185 8 0 SCOP 57959 Leucine zipper domain
184 96 6 2 SCOP 53901 Thiolase-like
182 182 4 1 SCOP 47699 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
181 132 27 3 SCOP 49785 Galactose-binding domain-like
180 174 31 0 SCOP 54695 POZ domain
178 178 9 2 SCOP 54495 UBC-like
177 177 8 2 SCOP 47113 Histone-fold
174 150 28 0 SCOP 81901 HCP-like
171 170 7 1 SCOP 103506 Mitochondrial carrier
164 155 14 0 SCOP 51110 alpha-D-mannose-specific plant lectins
163 144 34 0 SCOP 57756 Retrovirus zinc finger-like domains
163 163 6 1 SCOP 101148 Plant invertase/pectin methylesterase inhibitor
162 160 7 1 SCOP 52266 SGNH hydrolase
161 158 12 4 SCOP 56300 Metallo-dependent phosphatases
156 94 26 1 SCOP 55021 ACT-like
151 120 10 1 SCOP 50129 GroES-like
148 137 20 0 SCOP 117281 Kelch motif
147 147 18 1 SCOP 47616 GST C-terminal domain-like
137 137 13 4 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
136 136 19 3 SCOP 52402 Adenine nucleotide alpha hydrolases-like
135 128 40 8 SCOP 54211 Ribosomal protein S5 domain 2-like
133 131 12 1 SCOP 52743 Subtilisin-like
130 118 17 1 SCOP 52172 CheY-like
130 121 37 2 SCOP 56219 DNase I-like
129 124 16 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
127 127 7 3 SCOP 64356 SNARE-like
124 103 29 0 SCOP 46934 UBA-like
123 123 29 3 SCOP 50729 PH domain-like
122 91 18 0 SCOP 54631 CBS-domain pair
121 121 8 3 SCOP 49764 HSP20-like chaperones
121 117 28 3 SCOP 81296 E set domains
119 119 2 1 SCOP 81338 Aquaporin-like
118 48 11 2 SCOP 55753 Actin depolymerizing proteins
117 114 20 1 SCOP 81665 Calcium ATPase, transmembrane domain M
116 116 6 1 SCOP 56801 Acetyl-CoA synthetase-like
115 80 19 6 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
115 60 13 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
114 114 20 1 SCOP 81653 Calcium ATPase, transduction domain A
110 110 14 1 SCOP 52087 CRAL/TRIO domain
109 109 5 2 SCOP 50685 Barwin-like endoglucanases
107 105 23 2 SCOP 82199 SET domain
107 50 19 0 SCOP 90209 Ran binding protein zinc finger-like
105 97 10 0 SCOP 58038 SNARE fusion complex
100 78 8 0 SCOP 82153 FAS1 domain
96 91 25 2 SCOP 50447 Translation proteins
95 85 11 4 SCOP 52096 ClpP/crotonase
94 94 27 1 SCOP 53300 vWA-like
93 93 6 2 SCOP 56176 FAD-binding/transporter-associated domain-like
92 90 11 1 SCOP 50104 Translation proteins SH3-like domain
91 87 23 3 SCOP 52374 Nucleotidylyl transferase
91 63 8 1 SCOP 54534 FKBP-like
91 90 29 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
91 91 9 1 SCOP 48464 ENTH/VHS domain
91 81 15 1 SCOP 49599 TRAF domain-like
88 86 3 0 SCOP 117856 AF0104/ALDC/Ptd012-like
88 88 2 1 SCOP 49590 PHL pollen allergen
87 77 19 3 SCOP 52799 (Phosphotyrosine protein) phosphatases II
86 86 5 1 SCOP 50182 Sm-like ribonucleoproteins
86 86 10 0 SCOP 46938 CRAL/TRIO N-terminal domain
85 84 8 2 SCOP 55811 Nudix
84 56 9 2 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
84 74 17 0 SCOP 50985 RCC1/BLIP-II
84 83 8 1 SCOP 74788 Cullin repeat-like
83 83 6 2 SCOP 53720 ALDH-like
83 81 10 2 SCOP 48208 Six-hairpin glycosidases
83 83 11 4 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
82 73 15 0 SCOP 81324 Voltage-gated potassium channels
81 75 10 1 SCOP 47095 HMG-box
81 80 6 1 SCOP 103511 Chlorophyll a-b binding protein
80 80 11 1 SCOP 50891 Cyclophilin-like
79 79 11 1 SCOP 54427 NTF2-like
76 74 15 1 SCOP 51206 cAMP-binding domain-like
76 76 18 0 SCOP 63748 Tudor/PWWP/MBT
76 39 6 1 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
75 75 7 2 SCOP 54518 Tubby C-terminal domain-like
74 73 11 5 SCOP 51569 Aldolase
74 74 3 1 SCOP 51430 NAD(P)-linked oxidoreductase
73 73 13 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
73 53 17 0 SCOP 54768 dsRNA-binding domain-like
71 71 11 4 SCOP 74650 Galactose mutarotase-like
70 60 13 3 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
68 62 8 2 SCOP 53271 PRTase-like
68 67 11 7 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
68 51 8 3 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
67 35 16 1 SCOP 56024 Phospholipase D/nuclease
66 64 26 2 SCOP 55681 Class II aaRS and biotin synthetases
66 66 5 3 SCOP 48576 Terpenoid synthases
66 66 6 1 SCOP 49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
66 66 14 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
65 65 6 1 SCOP 47661 t-snare proteins
64 64 5 1 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
64 61 9 2 SCOP 53254 Phosphoglycerate mutase-like
64 59 13 0 SCOP 57997 Tropomyosin
63 63 9 1 SCOP 53850 Periplasmic binding protein-like II
63 49 5 2 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
62 35 10 1 SCOP 55785 PYP-like sensor domain (PAS domain)
61 53 9 2 SCOP 51695 PLC-like phosphodiesterases
61 61 18 3 SCOP 81301 Nucleotidyltransferase
61 61 15 1 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
61 46 20 0 SCOP 52113 BRCT domain
61 61 10 1 SCOP 47370 Bromodomain
60 55 18 4 SCOP 56059 Glutathione synthetase ATP-binding domain-like
60 60 5 1 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
60 57 10 0 SCOP 50965 Galactose oxidase, central domain
60 59 17 3 SCOP 63380 Riboflavin synthase domain-like
59 59 10 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
59 59 5 1 SCOP 49870 Osmotin, thaumatin-like protein
59 59 10 4 SCOP 54373 FAD-linked reductases, C-terminal domain
58 58 5 3 SCOP 53613 Ribokinase-like
58 58 14 4 SCOP 53187 Zn-dependent exopeptidases
57 57 23 3 SCOP 88697 PUA domain-like
57 57 8 3 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
57 57 12 1 SCOP 51011 Glycosyl hydrolase domain
57 57 10 1 SCOP 52025 PA domain
56 55 5 1 SCOP 48484 Lipoxigenase
55 55 9 5 SCOP 51556 Metallo-dependent hydrolases
55 49 16 2 SCOP 52317 Class I glutamine amidotransferase-like
55 37 13 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
55 55 6 1 SCOP 103612 SBT domain
54 53 13 4 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
54 53 5 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
54 28 12 0 SCOP 75471 YhbY-like
53 52 6 1 SCOP 52490 Tubulin nucleotide-binding domain-like
53 42 21 0 SCOP 54160 Chromo domain-like
52 50 6 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
52 52 11 2 SCOP 52029 GroEL apical domain-like
51 51 8 2 SCOP 52218 Flavoproteins
51 51 21 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
50 48 10 1 SCOP 51230 Single hybrid motif
50 26 14 1 SCOP 54980 EF-G C-terminal domain-like
50 43 6 0 SCOP 118310 AN1-like Zinc finger
49 49 7 2 SCOP 53137 Translational machinery components
49 49 6 1 SCOP 51395 FMN-linked oxidoreductases
49 49 8 2 SCOP 55315 L30e-like
49 49 5 1 SCOP 55307 Tubulin C-terminal domain-like
48 42 10 1 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
48 48 2 1 SCOP 50386 STI-like
47 40 9 1 SCOP 52777 CoA-dependent acyltransferases
47 47 5 0 SCOP 89009 GAT-like domain
46 42 3 1 SCOP 117070 LEA14-like
46 40 7 0 SCOP 54849 GroEL-intermediate domain like
45 19 7 1 SCOP 63411 LuxS/MPP-like metallohydrolase
45 43 14 0 SCOP 49452 Starch-binding domain-like
45 45 8 0 SCOP 57863 ArfGap/RecO-like zinc finger
45 45 2 1 SCOP 48445 14-3-3 protein
44 43 9 0 SCOP 144091 Rhomboid-like
44 43 9 1 SCOP 48592 GroEL equatorial domain-like
44 44 11 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
44 43 9 0 SCOP 144232 HIT/MYND zinc finger-like
44 10 7 0 SCOP 81698 FF domain
43 41 7 3 SCOP 52821 Rhodanese/Cell cycle control phosphatase
43 43 5 3 SCOP 51161 Trimeric LpxA-like enzymes
42 42 7 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
42 41 11 2 SCOP 109604 HD-domain/PDEase-like
42 42 12 1 SCOP 49879 SMAD/FHA domain
42 36 15 1 SCOP 47592 SWIB/MDM2 domain
42 14 1 1 SCOP 55973 S-adenosylmethionine synthetase
42 16 10 1 SCOP 53738 Phosphoglucomutase, first 3 domains
42 31 5 1 SCOP 47862 Saposin
41 41 1 1 SCOP 141562 At5g01610-like
40 37 6 2 SCOP 53927 Cytidine deaminase-like
40 40 4 0 SCOP 57829 Zn-binding ribosomal proteins
40 39 8 1 SCOP 56399 ADP-ribosylation
39 37 11 3 SCOP 55120 Pseudouridine synthase
39 39 3 1 SCOP 55724 Mog1p/PsbP-like
39 39 5 1 SCOP 140990 FtsH protease domain-like
39 39 1 1 SCOP 47874 Annexin
38 38 5 1 SCOP 54292 2Fe-2S ferredoxin-like
38 32 6 2 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
38 38 6 0 SCOP 49354 PapD-like
38 38 7 1 SCOP 81631 PAP/OAS1 substrate-binding domain
38 13 3 0 SCOP 47762 PAH2 domain
37 37 10 0 SCOP 103657 BAR/IMD domain-like
37 37 2 1 SCOP 56655 Carbohydrate phosphatase
37 37 12 2 SCOP 56104 SAICAR synthase-like
37 10 4 0 SCOP 50199 Staphylococcal nuclease
36 35 7 1 SCOP 75005 Arabinanase/levansucrase/invertase
36 35 5 1 SCOP 49363 Purple acid phosphatase, N-terminal domain
36 36 3 0 SCOP 117892 Band 7/SPFH domain
35 35 5 5 SCOP 51366 Ribulose-phoshate binding barrel
35 35 12 1 SCOP 55920 Creatinase/aminopeptidase
35 31 8 2 SCOP 53633 Carbamate kinase-like
35 31 11 0 SCOP 50156 PDZ domain-like
35 34 11 0 SCOP 81923 Double Clp-N motif
35 35 4 0 SCOP 47769 SAM/Pointed domain
34 33 5 3 SCOP 100950 NagB/RpiA/CoA transferase-like
34 34 4 0 SCOP 46579 Prefoldin
34 34 5 2 SCOP 52151 FabD/lysophospholipase-like
34 30 7 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
34 34 3 0 SCOP 53822 Periplasmic binding protein-like I
34 34 8 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
34 34 3 1 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
34 34 4 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
33 32 4 2 SCOP 47240 Ferritin-like
33 33 5 3 SCOP 48150 DNA-glycosylase
33 32 5 2 SCOP 52768 Arginase/deacetylase
33 33 2 0 SCOP 52091 SpoIIaa-like
33 33 5 0 SCOP 50800 PK beta-barrel domain-like
33 24 11 0 SCOP 57889 Cysteine-rich domain
33 33 8 1 SCOP 101690 PAZ domain
32 32 2 0 SCOP 51306 LexA/Signal peptidase
32 32 4 1 SCOP 102405 MCP/YpsA-like
32 17 5 1 SCOP 54416 Amine oxidase N-terminal region
31 31 2 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
31 31 2 1 SCOP 50324 Inorganic pyrophosphatase
31 17 3 0 SCOP 81333 F1F0 ATP synthase subunit C
31 23 6 1 SCOP 55781 GAF domain-like
31 31 10 1 SCOP 47576 Calponin-homology domain, CH-domain
31 31 7 2 SCOP 55931 Glutamine synthetase/guanido kinase
31 30 13 1 SCOP 52954 Class II aaRS ABD-related
31 18 9 0 SCOP 69065 RNase III domain-like
31 28 5 1 SCOP 51338 Composite domain of metallo-dependent hydrolases
31 17 6 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
31 31 5 2 SCOP 52922 TK C-terminal domain-like
31 31 4 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
30 30 2 1 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
30 30 9 1 SCOP 88723 PIN domain-like
30 30 4 1 SCOP 144000 Oxysterol-binding protein-like
30 30 2 1 SCOP 53056 beta-carbonic anhydrase, cab
30 30 2 1 SCOP 143113 NAP-like
30 30 15 0 SCOP 82171 DPP6 N-terminal domain-like
30 23 11 0 SCOP 51045 WW domain
29 29 3 1 SCOP 53784 Phosphofructokinase
29 29 6 0 SCOP 161245 Zinc hairpin stack
28 28 4 1 SCOP 52080 Ribosomal proteins L15p and L18e
28 17 4 2 SCOP 51726 UROD/MetE-like
28 28 5 0 SCOP 161219 CHY zinc finger-like
28 25 10 0 SCOP 57783 Zinc beta-ribbon
28 28 7 0 SCOP 161111 Cation efflux protein transmembrane domain-like
28 28 12 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
28 28 3 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
28 28 10 1 SCOP 56204 Hect, E3 ligase catalytic domain
28 28 8 0 SCOP 63491 BAG domain
27 27 3 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
27 26 4 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
27 27 5 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
27 27 3 0 SCOP 52935 PK C-terminal domain-like
27 27 4 0 SCOP 47090 PGBD-like
27 26 6 1 SCOP 75632 Cullin homology domain
26 26 7 2 SCOP 102114 Radical SAM enzymes
26 26 5 1 SCOP 50475 FMN-binding split barrel
26 25 5 0 SCOP 63829 Calcium-dependent phosphotriesterase
26 26 1 1 SCOP 49777 PEBP-like
26 26 1 1 SCOP 55797 PR-1-like
26 26 8 4 SCOP 52467 DHS-like NAD/FAD-binding domain
26 21 9 2 SCOP 52440 PreATP-grasp domain
25 25 3 1 SCOP 75304 Amidase signature (AS) enzymes
25 25 4 0 SCOP 47336 ACP-like
25 22 9 1 SCOP 50494 Trypsin-like serine proteases
25 18 6 2 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
25 25 14 0 SCOP 81995 beta-sandwich domain of Sec23/24
24 24 9 2 SCOP 75217 alpha/beta knot
24 24 8 1 SCOP 47819 HRDC-like
24 24 4 0 SCOP 102712 JAB1/MPN domain
24 18 2 1 SCOP 54909 Dimeric alpha+beta barrel
24 21 2 1 SCOP 54403 Cystatin/monellin
24 24 5 0 SCOP 48350 GTPase activation domain, GAP
24 22 5 0 SCOP 55666 Ribonuclease PH domain 2-like
23 23 5 2 SCOP 48557 L-aspartase-like
23 19 6 0 SCOP 54106 LysM domain
23 23 4 1 SCOP 48019 post-AAA+ oligomerization domain-like
23 23 5 1 SCOP 55060 GHMP Kinase, C-terminal domain
23 23 2 1 SCOP 56327 LDH C-terminal domain-like
23 19 3 0 SCOP 140383 BSD domain-like
22 22 3 1 SCOP 55282 RL5-like
22 22 1 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
22 22 2 1 SCOP 54648 DLC
22 22 5 1 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
22 12 3 1 SCOP 55945 TATA-box binding protein-like
22 22 8 0 SCOP 46774 ARID-like
21 21 9 1 SCOP 54862 4Fe-4S ferredoxins
21 21 5 0 SCOP 53649 Alkaline phosphatase-like
21 16 6 1 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
21 21 5 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
21 18 5 1 SCOP 50814 Lipocalins
21 12 4 1 SCOP 56053 Ribosomal protein L6
21 15 4 0 SCOP 109905 Surp module (SWAP domain)
21 21 10 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
21 21 4 0 SCOP 54368 Glutamine synthetase, N-terminal domain
20 20 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
20 20 6 1 SCOP 50022 ISP domain
20 16 5 0 SCOP 55136 Probable bacterial effector-binding domain
20 20 2 1 SCOP 55103 FAD-linked oxidases, C-terminal domain
20 19 6 1 SCOP 49998 Amine oxidase catalytic domain
20 20 1 1 SCOP 63887 P-domain of calnexin/calreticulin
19 19 4 1 SCOP 56808 Ribosomal protein L1
19 19 3 1 SCOP 55068 Peptide methionine sulfoxide reductase
19 18 5 1 SCOP 53955 Lysozyme-like
19 19 7 2 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
19 19 5 0 SCOP 160443 SMR domain-like
19 19 4 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
18 17 7 2 SCOP 54197 HIT-like
18 18 2 2 SCOP 51316 Mss4-like
18 17 4 1 SCOP 56815 Sec1/munc18-like (SM) proteins
18 13 6 1 SCOP 53590 Nucleoside hydrolase
18 18 3 2 SCOP 46626 Cytochrome c
18 18 4 1 SCOP 55159 eIF1-like
18 13 3 2 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
18 18 6 0 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
18 18 5 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
18 16 5 0 SCOP 50370 Ricin B-like lectins
18 18 6 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
18 18 3 0 SCOP 82708 R3H domain
18 18 5 0 SCOP 158639 ENT-like
18 18 1 0 SCOP 110004 Glycolipid transfer protein, GLTP
18 18 4 0 SCOP 144074 E2F-DP heterodimerization region
18 18 4 0 SCOP 109715 DEK C-terminal domain
18 18 9 0 SCOP 55277 GYF domain
18 18 6 0 SCOP 101238 XPC-binding domain
17 17 5 0 SCOP 46946 S13-like H2TH domain
17 17 3 0 SCOP 54897 Protease propeptides/inhibitors
17 17 3 0 SCOP 64268 PX domain
17 17 1 1 SCOP 111352 Ammonium transporter
17 17 4 1 SCOP 54447 ssDNA-binding transcriptional regulator domain
17 17 4 0 SCOP 57802 Rubredoxin-like
17 17 8 0 SCOP 69322 Tricorn protease domain 2
17 16 3 1 SCOP 54626 Chalcone isomerase
17 17 7 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
17 14 3 0 SCOP 50405 Actin-crosslinking proteins
17 17 4 1 SCOP 52210 Succinyl-CoA synthetase domains
17 17 8 0 SCOP 52075 Outer arm dynein light chain 1
17 17 8 1 SCOP 48425 Sec7 domain
17 17 7 1 SCOP 81811 Helical domain of Sec23/24
16 16 5 0 SCOP 55174 Alpha-L RNA-binding motif
16 16 4 2 SCOP 51419 PLP-binding barrel
16 16 1 0 SCOP 144122 Tim10-like
16 16 4 1 SCOP 48256 Citrate synthase
16 16 1 1 SCOP 51069 Carbonic anhydrase
16 16 3 1 SCOP 82704 AlbA-like
16 15 4 1 SCOP 48056 Di-copper centre-containing domain
16 16 5 1 SCOP 49348 Clathrin adaptor appendage domain
16 16 2 0 SCOP 47895 Transducin (alpha subunit), insertion domain
16 16 4 0 SCOP 63570 PABC (PABP) domain
16 6 4 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
16 16 4 0 SCOP 110942 HSP90 C-terminal domain
16 16 7 0 SCOP 82919 Zn-finger domain of Sec23/24
15 13 6 2 SCOP 53697 SIS domain
15 15 2 1 SCOP 75620 Release factor
15 15 4 1 SCOP 64005 Undecaprenyl diphosphate synthase
15 14 7 1 SCOP 52949 Macro domain-like
15 14 4 1 SCOP 48439 Protein prenylyltransferase
15 15 2 1 SCOP 55239 RuBisCO, small subunit
15 15 3 0 SCOP 54736 ClpS-like
15 15 4 1 SCOP 53732 Aconitase iron-sulfur domain
15 15 5 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
15 15 3 0 SCOP 57845 B-box zinc-binding domain
15 15 3 1 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
15 15 2 0 SCOP 54529 Mitochondrial glycoprotein MAM33-like
15 15 3 1 SCOP 81382 Skp1 dimerisation domain-like
15 15 10 0 SCOP 159042 Plus3-like
15 15 3 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
15 15 5 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
14 14 3 1 SCOP 54999 Ribosomal protein S10
14 14 4 0 SCOP 47060 S15/NS1 RNA-binding domain
14 14 6 2 SCOP 55821 YrdC/RibB
14 14 5 1 SCOP 56317 Carbon-nitrogen hydrolase
14 14 3 1 SCOP 49329 Cu,Zn superoxide dismutase-like
14 14 2 0 SCOP 50044 SH3-domain
14 14 1 1 SCOP 55418 eIF4e-like
14 14 5 1 SCOP 53800 Chelatase
14 14 2 1 SCOP 50692 ADC-like
14 13 4 1 SCOP 48600 Chorismate mutase II
14 14 5 1 SCOP 55186 ThrRS/AlaRS common domain
14 14 4 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
14 14 2 1 SCOP 54585 Cdc48 domain 2-like
13 13 2 0 SCOP 53167 Purine and uridine phosphorylases
13 13 2 0 SCOP 160369 Ribosomal protein L10-like
13 13 2 1 SCOP 51730 FAD-linked oxidoreductase
13 13 2 0 SCOP 55129 Ribosomal protein L30p/L7e
13 13 2 0 SCOP 48140 Ribosomal protein L19 (L19e)
13 13 2 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
13 13 4 0 SCOP 141571 Pentapeptide repeat-like
13 13 3 1 SCOP 81340 Clc chloride channel
13 12 10 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
13 13 5 1 SCOP 103025 Folate-binding domain
13 13 1 0 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
13 13 4 2 SCOP 51604 Enolase C-terminal domain-like
13 10 5 0 SCOP 47781 RuvA domain 2-like
13 13 4 1 SCOP 54984 eEF-1beta-like
13 13 5 1 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
13 10 7 0 SCOP 75553 Smc hinge domain
13 13 2 1 SCOP 81822 RuBisCo LSMT C-terminal, substrate-binding domain
13 13 2 1 SCOP 116768 DNA-binding domain of EIN3-like
12 12 3 1 SCOP 52166 Ribosomal protein L4
12 12 2 1 SCOP 56047 Ribosomal protein S8
12 12 3 0 SCOP 143800 L28p-like
12 12 2 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
12 12 1 1 SCOP 57798 Casein kinase II beta subunit
12 12 5 0 SCOP 47027 Acyl-CoA binding protein
12 12 2 1 SCOP 56019 The spindle assembly checkpoint protein mad2
12 12 5 1 SCOP 52016 LeuD/IlvD-like
12 12 3 2 SCOP 54913 GlnB-like
12 12 2 1 SCOP 101112 Oxygen-evolving enhancer protein 3,
12 12 4 1 SCOP 50993 Peptidase/esterase 'gauge' domain
12 12 2 1 SCOP 55895 Ribonuclease Rh-like
12 8 3 1 SCOP 55979 DNA clamp
12 12 8 0 SCOP 68906 SAP domain
12 6 2 1 SCOP 51101 Mannose-binding lectins
12 12 5 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
12 12 6 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
12 6 1 1 SCOP 55394 Bactericidal permeability-increasing protein, BPI
12 12 6 0 SCOP 57196 EGF/Laminin
12 12 2 0 SCOP 47050 VHP, Villin headpiece domain
12 12 2 1 SCOP 50989 Clathrin heavy-chain terminal domain
11 11 2 0 SCOP 54570 Ribosomal protein S19
11 11 2 1 SCOP 50193 Ribosomal protein L14
11 11 4 1 SCOP 50715 Ribosomal protein L25-like
11 11 3 0 SCOP 46561 Ribosomal protein L29 (L29p)
11 11 3 1 SCOP 48613 Heme oxygenase-like
11 11 1 1 SCOP 56634 Heme-dependent catalase-like
11 11 2 0 SCOP 52499 Isochorismatase-like hydrolases
11 9 4 2 SCOP 54506 Diaminopimelate epimerase-like
11 11 2 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
11 11 4 1 SCOP 88713 Glycoside hydrolase/deacetylase
11 11 1 1 SCOP 55770 Profilin (actin-binding protein)
11 11 1 2 SCOP 55909 Pentein
11 11 1 1 SCOP 46458 Globin-like
11 11 4 1 SCOP 64167 SurE-like
11 11 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
11 11 2 0 SCOP 102588 LmbE-like
11 7 2 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
11 11 2 1 SCOP 54826 Enolase N-terminal domain-like
11 11 4 1 SCOP 48225 Seven-hairpin glycosidases
11 11 2 1 SCOP 57247 Bowman-Birk inhibitor, BBI
11 11 5 1 SCOP 81271 TGS-like
11 11 2 1 SCOP 118359 Expressed protein At2g23090/F21P24.15
11 11 4 0 SCOP 158573 GINS helical bundle-like
11 11 4 1 SCOP 88688 Families 57/38 glycoside transferase middle domain
11 11 4 0 SCOP 143791 DUSP-like
11 11 3 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
11 11 3 0 SCOP 160219 AMPKBI-like
10 10 4 0 SCOP 54843 Ribosomal protein L22
10 9 3 1 SCOP 103491 Preprotein translocase SecY subunit
10 10 5 1 SCOP 53597 Dihydrofolate reductase-like
10 10 5 0 SCOP 110324 Ribosomal L27 protein-like
10 10 1 1 SCOP 56276 S-adenosylmethionine decarboxylase
10 9 2 1 SCOP 55298 YjgF-like
10 7 3 1 SCOP 69645 Arp2/3 complex subunits
10 10 3 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
10 10 2 0 SCOP 47072 Cysteine alpha-hairpin motif
10 10 2 0 SCOP 82282 Homocysteine S-methyltransferase
10 10 2 0 SCOP 55257 RBP11-like subunits of RNA polymerase
10 10 1 0 SCOP 50090 Electron transport accessory proteins
10 10 3 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
10 10 3 0 SCOP 103256 Hypothetical protein TM0160
10 10 1 0 SCOP 50960 TolB, C-terminal domain
10 10 6 2 SCOP 51246 Rudiment single hybrid motif
10 10 3 0 SCOP 101898 NHL repeat
10 10 3 0 SCOP 48619 Phospholipase A2, PLA2
10 10 2 1 SCOP 48537 Phospholipase C/P1 nuclease
10 10 4 0 SCOP 52129 Caspase-like
10 10 4 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
10 10 3 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
10 10 2 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
10 10 2 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
10 8 6 1 SCOP 158702 Sec63 N-terminal domain-like
10 10 4 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
10 10 2 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
10 10 2 0 SCOP 57095 Scorpion toxin-like
10 10 4 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
10 10 3 0 SCOP 140111 Endosomal sorting complex assembly domain
10 7 4 0 SCOP 57933 TAZ domain
10 10 4 0 SCOP 46942 Elongation factor TFIIS domain 2
10 10 5 0 SCOP 143503 PUG domain-like
10 10 3 0 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
9 9 3 1 SCOP 53790 Tetrapyrrole methylase
9 9 3 1 SCOP 54686 Ribosomal protein L16p/L10e
9 9 5 1 SCOP 82649 SufE/NifU
9 9 2 1 SCOP 52161 Ribosomal protein L13
9 9 2 0 SCOP 89360 HesB-like domain
9 9 1 0 SCOP 52042 Ribosomal protein L32e
9 9 3 1 SCOP 56322 ADC synthase
9 9 3 2 SCOP 52972 ITPase-like
9 9 1 1 SCOP 46924 RNA polymerase subunit RPB10
9 9 1 0 SCOP 55331 Tautomerase/MIF
9 9 3 0 SCOP 55154 CYTH-like phosphatases
9 9 2 1 SCOP 101386 all-alpha NTP pyrophosphatases
9 9 2 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
9 9 1 1 SCOP 102198 Putative cyclase
9 9 5 0 SCOP 53092 Creatinase/prolidase N-terminal domain
9 9 3 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
9 9 3 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
9 9 2 0 SCOP 49265 Fibronectin type III
9 9 8 0 SCOP 48334 DNA repair protein MutS, domain III
9 9 2 1 SCOP 50621 Alanine racemase C-terminal domain-like
9 9 7 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
9 5 2 1 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
9 9 1 0 SCOP 160527 V-type ATPase subunit E-like
9 9 1 0 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
8 8 4 1 SCOP 52980 Restriction endonuclease-like
8 8 2 1 SCOP 51351 Triosephosphate isomerase (TIM)
8 8 3 1 SCOP 142695 RibA-like
8 8 6 0 SCOP 101908 Putative isomerase YbhE
8 8 3 0 SCOP 54995 Ribosomal protein S6
8 8 1 0 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
8 8 2 0 SCOP 47694 Cytochrome c oxidase subunit h
8 8 2 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
8 8 2 0 SCOP 143456 VC0467-like
8 8 3 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
8 8 2 1 SCOP 89124 Nop domain
8 8 4 1 SCOP 46548 alpha-helical ferredoxin
8 5 3 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
8 8 1 0 SCOP 54654 CI-2 family of serine protease inhibitors
8 8 2 0 SCOP 160059 PriA/YqbF domain
8 4 2 0 SCOP 53681 Aspartate/glutamate racemase
8 8 2 0 SCOP 75704 Mitotic arrest deficient-like 1, Mad1
8 8 2 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
8 8 3 0 SCOP 81891 Poly A polymerase C-terminal region-like
8 5 2 0 SCOP 55116 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
8 8 2 0 SCOP 47933 ERP29 C domain-like
8 8 2 0 SCOP 102735 Trigger factor ribosome-binding domain
8 8 3 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
8 8 1 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
8 8 1 1 SCOP 101152 Mob1/phocein
8 8 2 0 SCOP 57016 Plant lectins/antimicrobial peptides
8 8 2 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
8 8 2 1 SCOP 89942 eEF1-gamma domain
8 8 4 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
8 8 1 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
8 8 2 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
7 7 1 1 SCOP 47973 Ribosomal protein S7
7 7 2 1 SCOP 55194 Ribosome recycling factor, RRF
7 7 2 1 SCOP 51713 tRNA-guanine transglycosylase
7 7 2 1 SCOP 56770 HydA/Nqo6-like
7 7 3 1 SCOP 52313 Ribosomal protein S2
7 7 3 1 SCOP 55205 EPT/RTPC-like
7 7 4 0 SCOP 82657 BolA-like
7 7 1 0 SCOP 103456 Preprotein translocase SecE subunit
7 7 3 1 SCOP 53328 Formyltransferase
7 7 1 2 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
7 7 2 1 SCOP 56529 FAH
7 4 3 0 SCOP 49478 Cna protein B-type domain
7 4 2 0 SCOP 46955 Putative DNA-binding domain
7 7 2 1 SCOP 55826 YbaK/ProRS associated domain
7 7 3 1 SCOP 111321 AF1104-like
7 7 2 0 SCOP 160374 RplX-like
7 7 2 1 SCOP 102462 Peptidyl-tRNA hydrolase II
7 7 2 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
7 5 4 1 SCOP 51971 Nucleotide-binding domain
7 7 1 0 SCOP 158745 LanC-like
7 7 2 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
7 7 2 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
7 7 2 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
7 6 2 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
7 7 2 1 SCOP 47446 Signal peptide-binding domain
7 7 3 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
7 7 1 1 SCOP 89817 Mago nashi protein
7 7 2 1 SCOP 69000 FAD-dependent thiol oxidase
7 7 2 1 SCOP 69012 alpha-ketoacid dehydrogenase kinase, N-terminal domain
7 7 4 0 SCOP 48340 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
7 7 2 1 SCOP 101233 PWI domain
7 7 2 0 SCOP 47040 Kix domain of CBP (creb binding protein)
7 7 2 1 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
7 7 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
6 6 2 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
6 6 2 1 SCOP 56420 Peptide deformylase
6 6 1 0 SCOP 143034 L35p-like
6 6 2 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
6 6 2 1 SCOP 53748 Phosphoglycerate kinase
6 6 1 0 SCOP 54575 Ribosomal protein L31e
6 6 1 0 SCOP 63393 RNA polymerase subunits
6 6 2 1 SCOP 55144 LigT-like
6 6 2 0 SCOP 55248 PCD-like
6 6 1 1 SCOP 64153 YjeF N-terminal domain-like
6 6 2 1 SCOP 101960 Stabilizer of iron transporter SufD
6 6 2 1 SCOP 53795 PEP carboxykinase-like
6 6 1 0 SCOP 158615 RbcX-like
6 6 3 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
6 6 4 0 SCOP 109910 YgfY-like
6 6 3 1 SCOP 110069 ApaG-like
6 6 3 1 SCOP 52335 Methylglyoxal synthase-like
6 6 2 0 SCOP 56821 Prismane protein-like
6 6 2 0 SCOP 69786 YggU-like
6 6 1 0 SCOP 50939 Sialidases
6 4 2 0 SCOP 50346 PRC-barrel domain
6 6 2 1 SCOP 56003 Molybdenum cofactor-binding domain
6 6 5 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
6 6 4 1 SCOP 142921 WGR domain-like
6 6 1 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
6 6 2 0 SCOP 55658 L9 N-domain-like
6 6 2 1 SCOP 68923 PEP carboxykinase N-terminal domain
6 6 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
6 6 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
6 4 3 1 SCOP 56042 PurM C-terminal domain-like
6 6 2 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
6 6 2 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
6 6 1 0 SCOP 69075 Glutamyl tRNA-reductase dimerization domain
6 6 3 0 SCOP 54752 RecA protein, C-terminal domain
6 6 4 1 SCOP 81837 BEACH domain
6 6 1 1 SCOP 141493 Allene oxide cyclase-like
6 6 6 0 SCOP 55271 DNA repair protein MutS, domain I
6 6 2 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
6 6 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
6 6 2 0 SCOP 140856 USP8 N-terminal domain-like
6 6 2 0 SCOP 50911 Mannose 6-phosphate receptor domain
6 3 2 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
6 6 1 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
6 6 2 0 SCOP 103243 KA1-like
6 5 3 1 SCOP 81886 Helical scaffold and wing domains of SecA
6 6 1 0 SCOP 54556 Chitinase insertion domain
6 6 2 0 SCOP 140612 EB1 dimerisation domain-like
6 6 2 1 SCOP 160897 Taf5 N-terminal domain-like
6 6 2 0 SCOP 64586 C-terminal domain of ProRS
6 6 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
6 6 4 1 SCOP 47587 Domain of poly(ADP-ribose) polymerase
5 4 2 0 SCOP 56214 4'-phosphopantetheinyl transferase
5 5 2 0 SCOP 141091 L21p-like
5 5 2 0 SCOP 54565 Ribosomal protein S16
5 5 2 1 SCOP 52121 Lumazine synthase
5 5 2 0 SCOP 140718 Mediator hinge subcomplex-like
5 5 1 0 SCOP 53639 AraD/HMP-PK domain-like
5 5 1 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
5 5 3 0 SCOP 58113 Apolipoprotein A-I
5 5 2 0 SCOP 47413 lambda repressor-like DNA-binding domains
5 5 1 0 SCOP 103441 PetM subunit of the cytochrome b6f complex
5 5 2 0 SCOP 158997 Trm112p-like
5 5 1 1 SCOP 53213 LigB-like
5 5 1 1 SCOP 51219 TRAP-like
5 5 4 1 SCOP 100939 SPOC domain-like
5 5 2 1 SCOP 89562 RraA-like
5 5 1 0 SCOP 46950 Double-stranded DNA-binding domain
5 5 2 1 SCOP 74784 Translin
5 5 2 0 SCOP 55287 RPB5-like RNA polymerase subunit
5 5 2 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
5 5 3 0 SCOP 46589 tRNA-binding arm
5 5 2 1 SCOP 102645 CoaB-like
5 5 2 0 SCOP 49344 CBD9-like
5 5 3 1 SCOP 56719 Type II DNA topoisomerase
5 5 3 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
5 5 2 1 SCOP 110019 ERO1-like
5 5 1 1 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
5 5 1 0 SCOP 143548 Serine metabolism enzymes domain
5 5 2 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
5 5 1 1 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
5 4 3 1 SCOP 55326 PurM N-terminal domain-like
5 5 4 0 SCOP 117289 Nucleoporin domain
5 5 2 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
5 5 1 1 SCOP 47741 CO dehydrogenase ISP C-domain like
5 4 2 1 SCOP 109993 VPS9 domain
5 5 1 0 SCOP 116846 MIT domain
5 5 2 0 SCOP 103107 Hypothetical protein c14orf129, hspc210
5 5 2 0 SCOP 57277 Granulin repeat
5 5 3 0 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
5 5 2 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
5 5 2 0 SCOP 50916 Rap30/74 interaction domains
5 5 2 0 SCOP 101821 Aminopeptidase/glucanase lid domain
5 5 2 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
5 5 5 0 SCOP 53150 DNA repair protein MutS, domain II
5 5 3 1 SCOP 81767 Pre-protein crosslinking domain of SecA
5 5 2 0 SCOP 101224 HAND domain of the nucleosome remodeling ATPase ISWI
4 4 2 0 SCOP 48013 NusB-like
4 4 1 0 SCOP 82607 YbaB-like
4 4 2 1 SCOP 64263 Prokaryotic ribosomal protein L17
4 4 1 1 SCOP 54285 MoaD/ThiS
4 4 2 0 SCOP 56935 Porins
4 4 3 1 SCOP 81452 Cytochrome c oxidase subunit III-like
4 4 1 0 SCOP 117991 YbeD/HP0495-like
4 4 1 0 SCOP 103464 Oligosaccharyltransferase subunit ost4p
4 4 1 0 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
4 4 1 0 SCOP 51645 Malate synthase G
4 4 2 0 SCOP 48662 Ribosomal protein L39e
4 4 1 1 SCOP 118203 Vacuolar ATP synthase subunit C
4 4 1 0 SCOP 46988 Tubulin chaperone cofactor A
4 4 1 0 SCOP 48690 Epsilon subunit of mitochondrial F1F0-ATP synthase
4 4 2 1 SCOP 52788 Phosphotyrosine protein phosphatases I
4 4 3 1 SCOP 81342 Transmembrane di-heme cytochromes
4 4 3 0 SCOP 111038 YjbQ-like
4 4 1 1 SCOP 51998 PFL-like glycyl radical enzymes
4 4 1 0 SCOP 55718 SCP-like
4 4 3 0 SCOP 82771 GIY-YIG endonuclease
4 4 1 0 SCOP 89550 PHP domain-like
4 3 2 1 SCOP 53218 Molybdenum cofactor biosynthesis proteins
4 4 2 1 SCOP 54111 Urease, gamma-subunit
4 4 2 1 SCOP 51278 Urease, beta-subunit
4 4 1 0 SCOP 49472 Transthyretin (synonym: prealbumin)
4 4 1 1 SCOP 158694 UraD-Like
4 4 1 1 SCOP 56925 OMPA-like
4 4 1 0 SCOP 48695 Multiheme cytochromes
4 4 1 1 SCOP 56726 DNA topoisomerase IV, alpha subunit
4 4 1 0 SCOP 143437 THUMP domain-like
4 4 1 0 SCOP 116820 Rps17e-like
4 4 2 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
4 4 2 0 SCOP 69318 Integrin alpha N-terminal domain
4 4 3 0 SCOP 63825 YWTD domain
4 4 2 0 SCOP 118116 DNA mismatch repair protein MutL
4 4 3 0 SCOP 49464 Carboxypeptidase regulatory domain-like
4 4 3 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
4 4 3 0 SCOP 141673 MOSC N-terminal domain-like
4 4 2 1 SCOP 110111 Ctag/Cox11
4 4 2 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
4 4 1 1 SCOP 55637 Cell cycle regulatory proteins
4 4 2 0 SCOP 55550 SH2 domain
4 4 4 1 SCOP 74924 Cap-Gly domain
4 4 2 1 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
4 4 2 1 SCOP 82109 MIR domain
4 4 1 0 SCOP 47672 Transferrin receptor-like dimerisation domain
4 4 2 0 SCOP 57414 Hairpin loop containing domain-like
4 4 1 1 SCOP 109920 Hypothetical protein At3g22680
4 4 3 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
4 4 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
4 4 2 1 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
4 4 2 0 SCOP 47031 Second domain of FERM
4 4 1 0 SCOP 69848 LCCL domain
4 4 1 0 SCOP 49758 Calpain large subunit, middle domain (domain III)
4 4 2 0 SCOP 55653 Ribosomal protein L9 C-domain
4 4 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
4 4 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
4 4 2 0 SCOP 158230 PRP4-like
3 3 2 0 SCOP 56731 DNA primase core
3 3 2 1 SCOP 52141 Uracil-DNA glycosylase-like
3 3 1 0 SCOP 57840 Ribosomal protein L36
3 3 1 1 SCOP 74731 Ribosomal protein L20
3 3 1 1 SCOP 82549 DAK1/DegV-like
3 3 1 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
3 3 1 1 SCOP 103263 Chorismate synthase, AroC
3 3 2 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
3 3 1 1 SCOP 56796 Dehydroquinate synthase-like
3 3 1 0 SCOP 141678 MAL13P1.257-like
3 3 1 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
3 3 1 1 SCOP 69500 DTD-like
3 3 1 0 SCOP 81411 Mitochondrial cytochrome c oxidase subunit VIa
3 3 1 0 SCOP 81514 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
3 3 1 0 SCOP 89895 FYSH domain
3 3 1 0 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
3 3 1 0 SCOP 140959 Indolic compounds 2,3-dioxygenase-like
3 3 1 0 SCOP 110849 ParB/Sulfiredoxin
3 3 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
3 3 1 0 SCOP 103486 V-type ATP synthase subunit C
3 3 1 1 SCOP 63562 RPB6/omega subunit-like
3 3 1 1 SCOP 57662 Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
3 3 3 1 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
3 3 2 1 SCOP 64234 Photosystem I subunit PsaD
3 3 1 1 SCOP 81483 Bacterial photosystem II reaction centre, L and M subunits
3 3 2 0 SCOP 103642 Sec-C motif
3 3 1 1 SCOP 118196 YaeB-like
3 3 1 1 SCOP 56266 DmpA/ArgJ-like
3 3 1 1 SCOP 56349 DNA breaking-rejoining enzymes
3 3 1 0 SCOP 54690 Molybdopterin synthase subunit MoaE
3 3 2 1 SCOP 56762 HydB/Nqo4-like
3 3 2 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
3 3 1 0 SCOP 89095 GatB/YqeY motif
3 3 1 1 SCOP 101473 DhaL-like
3 3 2 1 SCOP 50486 FMT C-terminal domain-like
3 3 1 0 SCOP 64076 MTH938-like
3 3 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
3 3 1 0 SCOP 160631 SMI1/KNR4-like
3 3 2 0 SCOP 160350 Rnp2-like
3 3 2 0 SCOP 143865 CorA soluble domain-like
3 3 1 0 SCOP 158832 Tex N-terminal region-like
3 3 1 0 SCOP 141255 YccV-like
3 3 1 1 SCOP 52009 Phosphohistidine domain
3 3 2 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
3 3 1 0 SCOP 56037 PheT/TilS domain
3 3 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
3 3 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
3 3 1 0 SCOP 47794 Rad51 N-terminal domain-like
3 3 1 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
3 3 2 0 SCOP 110221 AbfB domain
3 3 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
3 3 3 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
3 3 1 1 SCOP 143875 ERH-like
3 3 1 0 SCOP 57774 Microbial and mitochondrial ADK, insert "zinc finger" domain
3 3 1 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
3 3 1 0 SCOP 101931 Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain
3 3 1 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
3 3 2 0 SCOP 101420 C-terminal domain of Ku80
3 3 2 0 SCOP 140586 Dcp2 domain-like
3 3 1 0 SCOP 81502 ISP transmembrane anchor
3 3 1 1 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
3 3 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
3 3 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
2 2 2 0 SCOP 46911 Ribosomal protein S18
2 2 2 0 SCOP 64182 DHH phosphoesterases
2 2 1 1 SCOP 75625 YebC-like
2 2 1 0 SCOP 46992 Ribosomal protein S20
2 2 1 1 SCOP 69765 IpsF-like
2 2 1 1 SCOP 55387 Frataxin/Nqo15-like
2 2 1 0 SCOP 144217 CSL zinc finger
2 1 1 0 SCOP 55469 FMN-dependent nitroreductase-like
2 2 1 0 SCOP 81321 Family A G protein-coupled receptor-like
2 2 1 1 SCOP 102886 Coproporphyrinogen III oxidase
2 2 2 0 SCOP 142897 TFB5-like
2 2 2 0 SCOP 111278 SSo0622-like
2 2 1 0 SCOP 159468 AtpF-like
2 2 2 0 SCOP 144210 Nop10-like SnoRNP
2 2 1 0 SCOP 81508 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
2 2 1 1 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
2 2 1 0 SCOP 143870 PF0523-like
2 2 1 0 SCOP 69618 HemD-like
2 2 1 0 SCOP 143447 AMMECR1-like
2 2 1 0 SCOP 141734 HisI-like
2 2 1 1 SCOP 81558 Photosystem I subunits PsaA/PsaB
2 2 1 0 SCOP 81563 Photosystem I reaction center subunit X, PsaK
2 2 1 1 SCOP 81568 Photosystem I reaction center subunit XI, PsaL
2 2 1 1 SCOP 161077 Photosystem II antenna protein-like
2 2 1 1 SCOP 161045 Cytochrome b559 subunits
2 2 1 0 SCOP 161055 PsbZ-like
2 2 1 1 SCOP 101546 ASF1-like
2 2 2 1 SCOP 51717 Dihydropteroate synthetase-like
2 2 2 0 SCOP 56601 beta-lactamase/transpeptidase-like
2 2 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
2 2 2 0 SCOP 142754 NadA-like
2 2 1 0 SCOP 53807 "Helical backbone" metal receptor
2 2 2 0 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
2 2 1 0 SCOP 101744 Rof/RNase P subunit-like
2 2 1 1 SCOP 143990 YbiA-like
2 2 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
2 2 1 0 SCOP 159501 EreA/ChaN-like
2 2 1 1 SCOP 143081 BB1717-like
2 2 1 1 SCOP 51391 Thiamin phosphate synthase
2 2 1 1 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
2 2 2 1 SCOP 160909 ATP12-like
2 2 2 0 SCOP 56747 Prim-pol domain
2 2 1 1 SCOP 110581 Indigoidine synthase A-like
2 2 1 0 SCOP 142338 CofD-like
2 2 1 0 SCOP 141130 Acetamidase/Formamidase-like
2 2 2 0 SCOP 158710 PSPTO4464-like
2 2 1 1 SCOP 56574 Serpins
2 2 2 1 SCOP 142535 AF0625-like
2 2 1 1 SCOP 69695 SRP19
2 2 1 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
2 2 1 0 SCOP 82093 Heme chaperone CcmE
2 2 1 0 SCOP 89372 Fucose-specific lectin
2 2 2 0 SCOP 55608 Homing endonucleases
2 2 2 1 SCOP 82114 Riboflavin kinase-like
2 2 2 0 SCOP 69304 Tricorn protease N-terminal domain
2 2 1 0 SCOP 102110 (2r)-phospho-3-sulfolactate synthase ComA
2 2 1 1 SCOP 142877 EndoU-like
2 2 1 0 SCOP 81336 F1F0 ATP synthase subunit A
2 2 1 0 SCOP 144206 NOB1 zinc finger-like
2 2 2 0 SCOP 56436 C-type lectin-like
2 2 1 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
2 2 2 0 SCOP 58022 XRCC4, C-terminal oligomerization domain
2 2 2 0 SCOP 81464 Cytochrome c oxidase subunit II-like, transmembrane region
2 2 1 0 SCOP 142984 Nqo1 middle domain-like
2 2 1 0 SCOP 81585 PsbU/PolX domain-like
2 2 1 1 SCOP 53920 Fe-only hydrogenase
2 2 2 1 SCOP 101904 GyrA/ParC C-terminal domain-like
2 2 1 1 SCOP 140869 GUN4-like
2 2 1 0 SCOP 161270 PspA lactotransferrin-binding region
2 2 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
2 2 1 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
2 2 1 0 SCOP 63418 MurE/MurF N-terminal domain
2 2 1 0 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
2 2 1 0 SCOP 141259 CarD-like
2 2 2 0 SCOP 75420 YhbC-like, N-terminal domain
2 2 1 0 SCOP 140490 Nqo1C-terminal domain-like
2 2 2 0 SCOP 55904 Ornithine decarboxylase C-terminal domain
2 2 1 0 SCOP 54991 Anticodon-binding domain of PheRS
2 2 2 0 SCOP 57184 Growth factor receptor domain
2 2 1 0 SCOP 116742 eIF2alpha middle domain-like
2 2 2 0 SCOP 54452 MHC antigen-recognition domain
2 2 1 0 SCOP 47938 Functional domain of the splicing factor Prp18
2 2 1 1 SCOP 140984 PTPA-like
2 2 1 0 SCOP 48097 Regulator of G-protein signaling, RGS
2 2 1 0 SCOP 161065 ATP synthase D chain-like
2 2 1 0 SCOP 81531 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
2 2 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
2 2 2 0 SCOP 55261 GAD domain-like
2 2 1 0 SCOP 57059 omega toxin-like
2 2 2 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
2 2 1 0 SCOP 144292 occludin/ELL-like
2 2 1 1 SCOP 110993 eIF-2-alpha, C-terminal domain
2 2 2 1 SCOP 47212 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
2 2 1 1 SCOP 140427 VPS28 C-terminal domain-like
2 2 1 1 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
2 2 1 1 SCOP 88802 Pre-PUA domain
2 1 1 0 SCOP 140996 Hermes dimerisation domain
2 2 1 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
2 2 1 0 SCOP 143517 TRCF domain-like
2 2 1 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
2 2 2 0 SCOP 102741 Obg GTP-binding protein C-terminal domain
2 2 2 0 SCOP 47055 TAF(II)230 TBP-binding fragment
2 2 2 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
2 2 2 0 SCOP 160996 HI0933 insert domain-like
2 2 2 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 1 SCOP 51658 Xylose isomerase-like
1 1 1 0 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
1 1 1 0 SCOP 54060 His-Me finger endonucleases
1 1 1 1 SCOP 81536 Subunit III of photosystem I reaction centre, PsaF
1 1 1 0 SCOP 161037 Photosystem II reaction center protein K, PsbK
1 1 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 1 0 SCOP 143243 Nqo5-like
1 1 1 0 SCOP 82697 PurS-like
1 1 1 0 SCOP 140663 TTHA0068-like
1 1 1 0 SCOP 54975 Acylphosphatase/BLUF domain-like
1 1 1 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
1 1 1 0 SCOP 142764 YgbK-like
1 1 1 0 SCOP 160104 Acetoacetate decarboxylase-like
1 1 1 0 SCOP 63867 MoeA C-terminal domain-like
1 1 1 0 SCOP 55234 Cyanase C-terminal domain
1 1 1 0 SCOP 49384 Carbohydrate-binding domain
1 1 1 0 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 0 SCOP 90257 Myosin rod fragments
1 1 1 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
1 1 1 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
1 1 1 0 SCOP 110836 Hypothetical protein SAV1430
1 1 1 1 SCOP 63882 MoeA N-terminal region -like
1 1 1 0 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
1 1 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
1 1 1 0 SCOP 48508 Nuclear receptor ligand-binding domain
1 1 1 0 SCOP 100895 Kazal-type serine protease inhibitors
1 1 1 0 SCOP 140106 Calcyclin-binding protein-like
1 1 1 0 SCOP 88645 ssDNA viruses
1 1 1 0 SCOP 81872 BRCA2 helical domain
1 1 1 1 SCOP 49441 Cytochrome f, large domain
1 1 1 0 SCOP 103431 Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor
1 1 1 0 SCOP 144256 TSP9-like
1 1 1 0 SCOP 109736 FGAM synthase PurL, linker domain
1 1 1 0 SCOP 81878 BRCA2 tower domain

Jump to [ Top of page · Assignment statistics ]


The following superfamilies have one or more weak hits:

SCOP superfamily Troponin coil-coiled subunits
SCOP superfamily Head morphogenesis protein gp7
SCOP superfamily Dimerization motif of sir4
SCOP superfamily Zinc finger domain of DNA polymerase-alpha
SCOP superfamily Neurotransmitter-gated ion-channel transmembrane pore
SCOP superfamily MTH1187/YkoF-like
SCOP superfamily Doublecortin (DC)
SCOP superfamily Amyloid beta a4 protein copper binding domain (domain 2)
SCOP superfamily CoA-transferase family III (CaiB/BaiF)
SCOP superfamily L-sulfolactate dehydrogenase-like
SCOP superfamily Baseplate structural protein gp8
SCOP superfamily Collagen-binding domain
SCOP superfamily Gametocyte protein Pfg27
SCOP superfamily Soluble domain of poliovirus core protein 3a
SCOP superfamily Receptor-binding domain of short tail fibre protein gp12
SCOP superfamily Group I dsDNA viruses
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily Apical membrane antigen 1
SCOP superfamily Replication modulator SeqA, C-terminal DNA-binding domain
SCOP superfamily OsmC-like
SCOP superfamily Mechanosensitive channel protein MscS (YggB), C-terminal domain
SCOP superfamily SEA domain
SCOP superfamily Probable GTPase Der, C-terminal domain
SCOP superfamily Swiveling domain of dehydratase reactivase alpha subunit
SCOP superfamily BAH domain
SCOP superfamily Viral chemokine binding protein m3
SCOP superfamily Myosin phosphatase inhibitor 17kDa protein, CPI-17
SCOP superfamily Crustacean CHH/MIH/GIH neurohormone
SCOP superfamily Nucleotidyltransferase substrate binding subunit/domain
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily Cytochrome c oxidase subunit I-like
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
SCOP superfamily ABC transporter involved in vitamin B12 uptake, BtuC
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily Small-conductance potassium channel
SCOP superfamily H-NS histone-like proteins
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Chemotaxis phosphatase CheZ
SCOP superfamily Siroheme synthase middle domains-like
SCOP superfamily Rotavirus NSP2 fragment, N-terminal domain
SCOP superfamily Putative transcriptional regulator TM1602, C-terminal domain
SCOP superfamily HprK N-terminal domain-like
SCOP superfamily V-region of surface antigen I/II (SA I/II, PAC)
SCOP superfamily Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
SCOP superfamily Variable surface antigen VlsE
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily Eea1 homodimerisation domain
SCOP superfamily OMPT-like
SCOP superfamily NSP3 homodimer
SCOP superfamily DsrC, the gamma subunit of dissimilatory sulfite reductase
SCOP superfamily Transcription factor NusA, N-terminal domain
SCOP superfamily Integrin beta tail domain
SCOP superfamily Type III secretory system chaperone-like
SCOP superfamily Cell wall binding repeat
SCOP superfamily Nucleoplasmin-like core domain
SCOP superfamily Nuclear receptor coactivator interlocking domain
SCOP superfamily AhpD-like
SCOP superfamily Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain
SCOP superfamily Hypothetical protein YjbJ
SCOP superfamily Bcr-Abl oncoprotein oligomerization domain
SCOP superfamily FAT domain of focal adhesion kinase
SCOP superfamily Rho N-terminal domain-like
SCOP superfamily F1 ATPase inhibitor, IF1, C-terminal domain
SCOP superfamily Intermediate filament protein, coiled coil region
SCOP superfamily Cellulose docking domain, dockering
SCOP superfamily Phase 1 flagellin
SCOP superfamily Outer capsid protein sigma 3
SCOP superfamily CNF1/YfiH-like putative cysteine hydrolases
SCOP superfamily Hsp33 domain
SCOP superfamily Cell-division protein ZipA, C-terminal domain
SCOP superfamily SirA-like
SCOP superfamily Chorismate lyase-like
SCOP superfamily Methuselah ectodomain
SCOP superfamily Ribonuclease domain of colicin E3
SCOP superfamily SAND domain-like
SCOP superfamily Cytolysin/lectin
SCOP superfamily Nicotinic receptor ligand binding domain-like
SCOP superfamily Ganglioside M2 (gm2) activator
SCOP superfamily Olfactory marker protein
SCOP superfamily Telomeric repeat binding factor (TRF) dimerisation domain
SCOP superfamily Outer surface protein C (OspC)
SCOP superfamily Frizzled cysteine-rich domain
SCOP superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain
SCOP superfamily Bacterial hemolysins
SCOP superfamily Colicin Ia, N-terminal domain
SCOP superfamily Clostridium neurotoxins, "coiled-coil" domain
SCOP superfamily Variant surface glycoprotein (N-terminal domain)
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily N-terminal coiled coil domain from apc
SCOP superfamily Multimerization domain of the phosphoprotein from sendai virus
SCOP superfamily Delta-sleep-inducing peptide immunoreactive peptide
SCOP superfamily Coiled-coil dimerization domain from cortexillin I
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Assembly domain of cartilage oligomeric matrix protein
SCOP superfamily Chicken cartilage matrix protein
SCOP superfamily Trimerization domain of TRAF
SCOP superfamily Inhibitor of apoptosis (IAP) repeat
SCOP superfamily Metallothionein
SCOP superfamily Hypothetical protein MTH1184
SCOP superfamily Zn2/Cys6 DNA-binding domain
SCOP superfamily HIPIP (high potential iron protein)
SCOP superfamily HIV-1 VPU cytoplasmic domain
SCOP superfamily FnI-like domain
SCOP superfamily TNF receptor-like
SCOP superfamily TB module/8-cys domain
SCOP superfamily Methylamine dehydrogenase, L chain
SCOP superfamily Blood coagulation inhibitor (disintegrin)
SCOP superfamily Complement control module/SCR domain
SCOP superfamily Cystine-knot cytokines
SCOP superfamily Kringle-like
SCOP superfamily LDL receptor-like module
SCOP superfamily Defensin-like
SCOP superfamily PMP inhibitors
SCOP superfamily Anthrax protective antigen
SCOP superfamily Viral glycoprotein, central and dimerisation domains
SCOP superfamily Aerolisin/ETX pore-forming domain
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily Bcl-2 inhibitors of programmed cell death
SCOP superfamily Colicin
SCOP superfamily Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
SCOP superfamily Penicillin binding protein dimerisation domain
SCOP superfamily Nitric oxide (NO) synthase oxygenase domain
SCOP superfamily gp120 core
SCOP superfamily Ribosome inactivating proteins (RIP)
SCOP superfamily SMAD MH1 domain
SCOP superfamily Pyruvoyl-dependent histidine and arginine decarboxylases
SCOP superfamily Monooxygenase (hydroxylase) regulatory protein
SCOP superfamily N-acetylmuramoyl-L-alanine amidase-like
SCOP superfamily Phoshotransferase/anion transport protein
SCOP superfamily Regulatory factor Nef
SCOP superfamily Copper amine oxidase, domain N
SCOP superfamily tRNA-intron endonuclease N-terminal domain-like
SCOP superfamily C-terminal domain of arginine repressor
SCOP superfamily Cell division protein MinE topological specificity domain
SCOP superfamily Methyl-coenzyme M reductase subunits
SCOP superfamily Nucleotide cyclase
SCOP superfamily Translational regulator protein regA
SCOP superfamily RuBisCO, large subunit, small (N-terminal) domain
SCOP superfamily Superantigen toxins, C-terminal domain
SCOP superfamily Prion-like
SCOP superfamily RNase A-like
SCOP superfamily Glutaminase/Asparaginase
SCOP superfamily HybD-like
SCOP superfamily Methylated DNA-protein cysteine methyltransferase domain
SCOP superfamily B12-dependent dehydatase associated subunit
SCOP superfamily PTS system IIB component-like
SCOP superfamily Methylesterase CheB, C-terminal domain
SCOP superfamily Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
SCOP superfamily N-(deoxy)ribosyltransferase-like
SCOP superfamily Type II 3-dehydroquinate dehydratase
SCOP superfamily Cobalamin (vitamin B12)-dependent enzymes
SCOP superfamily RuBisCo, C-terminal domain
SCOP superfamily Head-binding domain of phage P22 tailspike protein
SCOP superfamily Hedgehog/intein (Hint) domain
SCOP superfamily Duplicated hybrid motif
SCOP superfamily An insect antifreeze protein
SCOP superfamily Insect cysteine-rich antifreeze protein
SCOP superfamily beta-Roll
SCOP superfamily delta-Endotoxin (insectocide), middle domain
SCOP superfamily Carbohydrate binding domain
SCOP superfamily Nitrous oxide reductase, N-terminal domain
SCOP superfamily Thermostable phytase (3-phytase)
SCOP superfamily XRCC4, N-terminal domain
SCOP superfamily Agglutinin
SCOP superfamily Cytokine
SCOP superfamily Cell growth inhibitor/plasmid maintenance toxic component
SCOP superfamily Myosin S1 fragment, N-terminal domain
SCOP superfamily EV matrix protein
SCOP superfamily Spermadhesin, CUB domain
SCOP superfamily TNF-like
SCOP superfamily Group II dsDNA viruses VP
SCOP superfamily gamma-Crystallin-like
SCOP superfamily Rab geranylgeranyltransferase alpha-subunit, insert domain
SCOP superfamily p53-like transcription factors
SCOP superfamily Bacterial adhesins
SCOP superfamily Immunoglobulin
SCOP superfamily Moesin tail domain
SCOP superfamily Transducin (heterotrimeric G protein), gamma chain
SCOP superfamily Tetraspanin
SCOP superfamily Fungal elicitin
SCOP superfamily Tetracyclin repressor-like, C-terminal domain
SCOP superfamily Cytochrome c oxidase subunit E
SCOP superfamily Lipovitellin-phosvitin complex, superhelical domain
SCOP superfamily Ras GEF
SCOP superfamily Aldehyde ferredoxin oxidoreductase, C-terminal domains
SCOP superfamily TrpR-like
SCOP superfamily DBL homology domain (DH-domain)
SCOP superfamily FliG
SCOP superfamily DEATH domain
SCOP superfamily Iron-dependent repressor protein, dimerization domain
SCOP superfamily Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
SCOP superfamily Bacteriocin AS-48
SCOP superfamily Apolipophorin-III
SCOP superfamily Hepatitis B viral capsid (hbcag)
SCOP superfamily Retroviral matrix proteins
SCOP superfamily Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
SCOP superfamily lambda integrase-like, N-terminal domain
SCOP superfamily Protein HNS-dependent expression A; HdeA
SCOP superfamily Anaphylotoxins (complement system)
SCOP superfamily STAT
SCOP superfamily Methionine synthase domain
SCOP superfamily Ribbon-helix-helix
SCOP superfamily Insect pheromone/odorant-binding proteins
SCOP superfamily Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
SCOP superfamily ROP protein
SCOP superfamily Retrovirus capsid dimerization domain-like
SCOP superfamily 4-helical cytokines
SCOP superfamily Bacterial GAP domain
SCOP superfamily alpha-catenin/vinculin-like
SCOP superfamily Proteasome activator
SCOP superfamily Hemerythrin-like
SCOP superfamily Apolipoprotein
SCOP superfamily Methane monooxygenase hydrolase, gamma subunit
SCOP superfamily Diol dehydratase, gamma subunit
SCOP superfamily Fertilization protein
SCOP superfamily T4 endonuclease V
SCOP superfamily RAP domain-like
SCOP superfamily Enzyme IIa from lactose specific PTS, IIa-lac
SCOP superfamily Spectrin repeat
SCOP superfamily N-terminal Zn binding domain of HIV integrase
SCOP superfamily C-terminal effector domain of the bipartite response regulators
SCOP superfamily Epsilon subunit of F1F0-ATP synthase C-terminal domain
SCOP superfamily Eukaryotic DNA topoisomerase I, dispensable insert domain
SCOP superfamily HR1 repeat
SCOP superfamily DNA polymerase III theta subunit-like
SCOP superfamily GreA transcript cleavage protein, N-terminal domain
SCOP superfamily Gam-like
SCOP superfamily RILP dimerisation region
SCOP superfamily T-antigen specific domain-like
SCOP superfamily E6 C-terminal domain-like
SCOP superfamily YfgJ-like
SCOP superfamily MetI-like
SCOP superfamily MgtE membrane domain-like
SCOP superfamily MAPEG domain-like
SCOP superfamily SNF-like
SCOP superfamily ATP synthase B chain-like
SCOP superfamily Photosystem II reaction center protein I, PsbI
SCOP superfamily Viral glycoprotein ectodomain-like
SCOP superfamily YacF-like
SCOP superfamily FlhC-like
SCOP superfamily PG1388-like
SCOP superfamily Jann2411-like
SCOP superfamily YehR-like
SCOP superfamily FLJ32549 C-terminal domain-like
SCOP superfamily BT0923-like
SCOP superfamily BRK domain-like
SCOP superfamily NMB0513-like
SCOP superfamily PH0987 N-terminal domain-like
SCOP superfamily BLRF2-like
SCOP superfamily YdfO-like
SCOP superfamily NosL/MerB-like
SCOP superfamily MTH889-like
SCOP superfamily Bacterial polysaccharide co-polymerase-like
SCOP superfamily EspE N-terminal domain-like
SCOP superfamily FlaG-like
SCOP superfamily NMB0488-like
SCOP superfamily YegP-like
SCOP superfamily CdCA1 repeat-like
SCOP superfamily YerB-like
SCOP superfamily Cgl1923-like
SCOP superfamily XCC0632-like
SCOP superfamily AttH-like
SCOP superfamily Mib/herc2 domain-like
SCOP superfamily WSSV envelope protein-like
SCOP superfamily Smr-associated domain-like
SCOP superfamily NEAT domain-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily Lag-3 N-terminal region
SCOP superfamily MgtE N-terminal domain-like
SCOP superfamily TerB-like
SCOP superfamily Sama2622-like
SCOP superfamily MtlR-like
SCOP superfamily RPA2825-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily BH3980-like
SCOP superfamily TAFH domain-like
SCOP superfamily FLJ32549 domain-like
SCOP superfamily PG0775 C-terminal domain-like
SCOP superfamily DsbB-like
SCOP superfamily HP0062-like
SCOP superfamily YvfG-like
SCOP superfamily YnzC-like
SCOP superfamily Sec2 N-terminal region
SCOP superfamily Eferin C-derminal domain-like
SCOP superfamily MPN010-like
SCOP superfamily Vanabin-like
SCOP superfamily ImpE-like
SCOP superfamily FdhE-like
SCOP superfamily Peptidoglycan deacetylase N-terminal noncatalytic region
SCOP superfamily ORC1-binding domain
SCOP superfamily L,D-transpeptidase pre-catalytic domain-like
SCOP superfamily UbiD C-terminal domain-like
SCOP superfamily RGC domain-like
SCOP superfamily YwmB-like
SCOP superfamily GAS2 domain-like
SCOP superfamily Prenyltransferase-like
SCOP superfamily TM1622-like
SCOP superfamily TTP0101/SSO1404-like
SCOP superfamily Transposase IS200-like
SCOP superfamily DOPA-like
SCOP superfamily Kinetochore globular domain
SCOP superfamily YjbR-like
SCOP superfamily PhtA domain-like
SCOP superfamily CAC2185-like
SCOP superfamily CinA-like
SCOP superfamily MFPT repeat-like
SCOP superfamily L,D-transpeptidase catalytic domain-like
SCOP superfamily TM0957-like
SCOP superfamily Agglutinin HPA-like
SCOP superfamily CalX-like
SCOP superfamily Topoisomerase V catalytic domain-like
SCOP superfamily Duffy binding domain-like
SCOP superfamily PriB N-terminal domain-like
SCOP superfamily TROVE domain-like
SCOP superfamily Pseudo ankyrin repeat-like
SCOP superfamily SipA N-terminal domain-like
SCOP superfamily Rv1873-like
SCOP superfamily PA2201 C-terminal domain-like
SCOP superfamily IpaD-like
SCOP superfamily MukF C-terminal domain-like
SCOP superfamily FlgN-like
SCOP superfamily BAS1536-like
SCOP superfamily LemA-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily YppE-like
SCOP superfamily EF2458-like
SCOP superfamily MxiH-like
SCOP superfamily Rabenosyn-5 Rab-binding domain-like
SCOP superfamily SPy1572-like
SCOP superfamily ISY1 domain-like
SCOP superfamily Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain
SCOP superfamily Proton glutamate symport protein
SCOP superfamily Phosphoprotein M1, C-terminal domain
SCOP superfamily WWE domain
SCOP superfamily TM1631-like
SCOP superfamily Hypothetical protein PA1324
SCOP superfamily Accessory protein X4 (ORF8, ORF7a)
SCOP superfamily DNA primase DnaG, C-terminal domain
SCOP superfamily Hypothetical protein MPN330
SCOP superfamily RNA-binding protein She2p
SCOP superfamily EspA/CesA-like
SCOP superfamily Hook domain
SCOP superfamily XseB-like
SCOP superfamily TrkA C-terminal domain-like
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily Geminin coiled-coil domain
SCOP superfamily Resistin
SCOP superfamily Pollen allergen ole e 6
SCOP superfamily OmpH-like
SCOP superfamily VP4 membrane interaction domain
SCOP superfamily Recombination protein RecR
SCOP superfamily Sulfolobus fructose-1,6-bisphosphatase-like
SCOP superfamily Hypothetical protein yfbM
SCOP superfamily Hypothetical protein PF0899
SCOP superfamily Sporulation related repeat
SCOP superfamily Hypothetical protein MTH677
SCOP superfamily Glycerate kinase I
SCOP superfamily TTHA0583/YokD-like
SCOP superfamily Toprim domain
SCOP superfamily Coronavirus RNA-binding domain
SCOP superfamily GDNF receptor-like
SCOP superfamily Hypothetical protein MG354
SCOP superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
SCOP superfamily I/LWEQ domain
SCOP superfamily CAPPD, an extracellular domain of amyloid beta A4 protein
SCOP superfamily Bacteriocin immunity protein-like
SCOP superfamily Domain from hypothetical 2610208m17rik protein
SCOP superfamily Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
SCOP superfamily PhoU-like
SCOP superfamily Alpha-hemoglobin stabilizing protein AHSP
SCOP superfamily DnaK suppressor protein DksA, alpha-hairpin domain
SCOP superfamily G protein-binding domain
SCOP superfamily TSP type-3 repeat
SCOP superfamily Necrosis inducing protein 1, NIP1
SCOP superfamily Plexin repeat
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily Tombusvirus P19 core protein, VP19
SCOP superfamily CheC-like
SCOP superfamily Chromosomal protein MC1
SCOP superfamily NIF3 (NGG1p interacting factor 3)-like
SCOP superfamily RbsD-like
SCOP superfamily F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD)
SCOP superfamily Creatininase
SCOP superfamily Trimeric adhesin
SCOP superfamily Sema domain
SCOP superfamily Apyrase
SCOP superfamily Hypothetical protein YgiW
SCOP superfamily Hydrophobin II, HfbII
SCOP superfamily Anti-sigma factor FlgM
SCOP superfamily Stathmin
SCOP superfamily Eukaryotic initiation factor 4f subunit eIF4g, eIF4e-binding domain
SCOP superfamily ADP-ribosylglycohydrolase
SCOP superfamily Hypothetical protein ST1625
SCOP superfamily YcfC-like
SCOP superfamily Invasion protein A (SipA) , C-terminal actin binding domain
SCOP superfamily GRIP domain
SCOP superfamily Methenyltetrahydrofolate cyclohydrolase-like
SCOP superfamily Flavivirus capsid protein C
SCOP superfamily Phosphoprotein XD domain
SCOP superfamily Typo IV secretion system protein TraC
SCOP superfamily IP3 receptor type 1 binding core, domain 2
SCOP superfamily Plant proteinase inhibitors

Jump to [ Top of page · Assignment statistics ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.