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  Home > Genomes > Superfamily assignments for Zea mays subsp. mays


Zea mays subsp. mays superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea; Zea mays; Zea mays subsp. mays

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 53764 total
31014 (58 %) with assignment
344 average length
43 % amino acid coverage
Domains: 41454 total
963 unique superfamilies
799 unique families
254 average length
43 average superfamily size
98 % formed by duplication
Domain combinations: 1164 domain pairs
4261 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
2167 2144 181 4 SCOP 56112 Protein kinase-like (PK-like)
2033 1824 266 11 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
1030 970 103 3 SCOP 57850 RING/U-box
936 713 76 1 SCOP 54928 RNA-binding domain, RBD
752 742 60 9 SCOP 51735 NAD(P)-binding Rossmann-fold domains
737 654 100 10 SCOP 48371 ARM repeat
722 676 51 2 SCOP 46689 Homeodomain-like
645 641 32 9 SCOP 53474 alpha/beta-Hydrolases
634 533 102 2 SCOP 52058 L domain-like
549 443 66 1 SCOP 48452 TPR-like
539 483 32 16 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
492 430 48 4 SCOP 52833 Thioredoxin-like
480 447 74 1 SCOP 50978 WD40 repeat-like
454 432 10 0 SCOP 103473 MFS general substrate transporter
445 443 47 8 SCOP 51445 (Trans)glycosidases
407 385 41 1 SCOP 47473 EF-hand
364 357 17 5 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
357 357 52 0 SCOP 81383 F-box domain
350 347 57 8 SCOP 54001 Cysteine proteinases
343 272 20 1 SCOP 54171 DNA-binding domain
329 261 60 5 SCOP 50249 Nucleic acid-binding proteins
326 325 10 1 SCOP 48264 Cytochrome P450
326 326 6 0 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
301 273 66 0 SCOP 52047 RNI-like
299 298 21 5 SCOP 53448 Nucleotide-diphospho-sugar transferases
293 223 24 0 SCOP 57667 beta-beta-alpha zinc fingers
291 291 39 8 SCOP 56784 HAD-like
287 168 24 4 SCOP 53067 Actin-like ATPase domain
286 278 42 3 SCOP 46785 "Winged helix" DNA-binding domain
268 233 42 5 SCOP 51905 FAD/NAD(P)-binding domain
252 181 46 3 SCOP 54236 Ubiquitin-like
251 192 11 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
251 184 44 1 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
247 114 33 0 SCOP 90229 CCCH zinc finger
236 210 65 1 SCOP 57903 FYVE/PHD zinc finger
235 134 16 3 SCOP 49503 Cupredoxins
233 155 17 1 SCOP 47954 Cyclin-like
231 228 8 1 SCOP 48113 Heme-dependent peroxidases
230 229 16 3 SCOP 51197 Clavaminate synthase-like
223 219 11 1 SCOP 81606 PP2C-like
221 220 12 2 SCOP 47113 Histone-fold
211 207 13 5 SCOP 53383 PLP-dependent transferases
200 199 7 1 SCOP 101941 NAC domain
197 196 40 1 SCOP 46565 Chaperone J-domain
195 105 31 1 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
187 187 14 2 SCOP 54495 UBC-like
186 184 31 4 SCOP 53098 Ribonuclease H-like
185 141 30 0 SCOP 57756 Retrovirus zinc finger-like domains
179 179 25 3 SCOP 49899 Concanavalin A-like lectins/glucanases
178 178 4 0 SCOP 57959 Leucine zipper domain
171 152 8 1 SCOP 118290 WRKY DNA-binding domain
164 164 19 0 SCOP 54277 CAD & PB1 domains
162 108 21 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
162 158 42 1 SCOP 48403 Ankyrin repeat
161 160 12 3 SCOP 51126 Pectin lyase-like
161 158 31 1 SCOP 54695 POZ domain
160 92 10 2 SCOP 53901 Thiolase-like
159 94 30 1 SCOP 55021 ACT-like
157 141 16 1 SCOP 101936 DNA-binding pseudobarrel domain
153 153 14 4 SCOP 56300 Metallo-dependent phosphatases
152 152 4 2 SCOP 50685 Barwin-like endoglucanases
151 151 8 1 SCOP 103506 Mitochondrial carrier
150 150 4 2 SCOP 47699 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
147 116 10 1 SCOP 50129 GroES-like
142 136 11 5 SCOP 51182 RmlC-like cupins
141 117 20 2 SCOP 55961 Bet v1-like
139 117 21 0 SCOP 55008 HMA, heavy metal-associated domain
138 68 24 0 SCOP 90209 Ran binding protein zinc finger-like
137 137 11 1 SCOP 50630 Acid proteases
133 118 24 1 SCOP 117281 Kelch motif
128 100 22 2 SCOP 49785 Galactose-binding domain-like
125 125 5 1 SCOP 52266 SGNH hydrolase
125 121 26 2 SCOP 50447 Translation proteins
124 124 14 1 SCOP 47616 GST C-terminal domain-like
122 109 20 1 SCOP 49599 TRAF domain-like
122 122 6 1 SCOP 49590 PHL pollen allergen
120 115 37 8 SCOP 54211 Ribosomal protein S5 domain 2-like
118 104 32 0 SCOP 46934 UBA-like
115 115 23 3 SCOP 52402 Adenine nucleotide alpha hydrolases-like
114 114 18 4 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
106 106 12 3 SCOP 64356 SNARE-like
105 65 18 1 SCOP 90123 ABC transporter transmembrane region
105 105 28 3 SCOP 50729 PH domain-like
104 103 18 2 SCOP 82199 SET domain
99 95 24 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
99 96 18 2 SCOP 56219 DNase I-like
98 80 14 3 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
97 74 20 0 SCOP 54631 CBS-domain pair
96 96 5 0 SCOP 55455 SRF-like
95 92 17 1 SCOP 52490 Tubulin nucleotide-binding domain-like
89 89 9 3 SCOP 48576 Terpenoid synthases
89 88 9 1 SCOP 56801 Acetyl-CoA synthetase-like
88 88 8 3 SCOP 49764 HSP20-like chaperones
88 86 37 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
87 76 14 2 SCOP 52317 Class I glutamine amidotransferase-like
87 37 10 2 SCOP 55753 Actin depolymerizing proteins
86 75 18 4 SCOP 52096 ClpP/crotonase
85 85 24 1 SCOP 53300 vWA-like
85 85 22 1 SCOP 81665 Calcium ATPase, transmembrane domain M
84 84 15 1 SCOP 52087 CRAL/TRIO domain
83 71 25 0 SCOP 81901 HCP-like
82 48 10 1 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
81 78 28 3 SCOP 52374 Nucleotidylyl transferase
80 45 22 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
79 79 5 1 SCOP 50182 Sm-like ribonucleoproteins
77 76 30 3 SCOP 81296 E set domains
77 71 18 0 SCOP 52172 CheY-like
76 75 11 0 SCOP 52743 Subtilisin-like
76 76 10 1 SCOP 48464 ENTH/VHS domain
76 76 10 0 SCOP 101148 Plant invertase/pectin methylesterase inhibitor
75 67 15 2 SCOP 51695 PLC-like phosphodiesterases
75 59 10 1 SCOP 54534 FKBP-like
75 75 4 1 SCOP 103511 Chlorophyll a-b binding protein
75 74 9 0 SCOP 51110 alpha-D-mannose-specific plant lectins
74 73 13 1 SCOP 50104 Translation proteins SH3-like domain
73 71 4 1 SCOP 51430 NAD(P)-linked oxidoreductase
72 71 13 1 SCOP 50891 Cyclophilin-like
72 72 20 1 SCOP 81653 Calcium ATPase, transduction domain A
69 53 10 3 SCOP 52821 Rhodanese/Cell cycle control phosphatase
69 65 17 3 SCOP 52799 (Phosphotyrosine protein) phosphatases II
69 69 8 1 SCOP 55307 Tubulin C-terminal domain-like
69 65 20 3 SCOP 63380 Riboflavin synthase domain-like
69 69 9 1 SCOP 74788 Cullin repeat-like
68 68 4 1 SCOP 81338 Aquaporin-like
67 66 8 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
66 66 10 2 SCOP 55811 Nudix
66 62 13 0 SCOP 58038 SNARE fusion complex
66 63 9 2 SCOP 54518 Tubby C-terminal domain-like
66 32 15 1 SCOP 63411 LuxS/MPP-like metallohydrolase
66 66 12 4 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
65 45 12 6 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
65 38 16 1 SCOP 56024 Phospholipase D/nuclease
64 64 6 2 SCOP 48208 Six-hairpin glycosidases
63 63 4 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
62 62 17 4 SCOP 53187 Zn-dependent exopeptidases
62 62 8 1 SCOP 49870 Osmotin, thaumatin-like protein
62 62 12 1 SCOP 47370 Bromodomain
61 58 20 4 SCOP 56059 Glutathione synthetase ATP-binding domain-like
61 61 20 2 SCOP 88697 PUA domain-like
61 61 10 0 SCOP 89009 GAT-like domain
60 54 10 2 SCOP 53271 PRTase-like
60 60 10 1 SCOP 54427 NTF2-like
59 51 7 2 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
59 59 10 0 SCOP 46938 CRAL/TRIO N-terminal domain
58 50 19 0 SCOP 81324 Voltage-gated potassium channels
57 57 13 7 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
57 53 17 0 SCOP 50985 RCC1/BLIP-II
57 57 4 0 SCOP 117856 AF0104/ALDC/Ptd012-like
56 56 20 2 SCOP 81301 Nucleotidyltransferase
55 55 14 4 SCOP 74650 Galactose mutarotase-like
54 51 5 4 SCOP 51366 Ribulose-phoshate binding barrel
54 51 10 3 SCOP 55120 Pseudouridine synthase
54 52 8 4 SCOP 51161 Trimeric LpxA-like enzymes
54 54 7 1 SCOP 51395 FMN-linked oxidoreductases
53 53 9 4 SCOP 51569 Aldolase
53 53 16 1 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
53 53 12 2 SCOP 52029 GroEL apical domain-like
52 52 25 2 SCOP 55681 Class II aaRS and biotin synthetases
52 52 10 2 SCOP 56176 FAD-binding/transporter-associated domain-like
52 51 7 1 SCOP 103612 SBT domain
51 49 8 0 SCOP 47095 HMG-box
51 47 13 3 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
51 35 20 0 SCOP 54768 dsRNA-binding domain-like
51 50 20 0 SCOP 63748 Tudor/PWWP/MBT
50 50 4 2 SCOP 53720 ALDH-like
50 50 8 0 SCOP 144091 Rhomboid-like
50 50 11 0 SCOP 50965 Galactose oxidase, central domain
50 50 12 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
50 50 4 1 SCOP 141562 At5g01610-like
49 49 7 2 SCOP 53137 Translational machinery components
49 49 8 2 SCOP 55315 L30e-like
49 31 18 1 SCOP 55785 PYP-like sensor domain (PAS domain)
49 49 8 1 SCOP 48592 GroEL equatorial domain-like
48 48 10 0 SCOP 57863 ArfGap/RecO-like zinc finger
47 47 6 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
47 43 10 1 SCOP 50494 Trypsin-like serine proteases
47 34 6 0 SCOP 82153 FAS1 domain
47 45 14 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
47 45 8 1 SCOP 52777 CoA-dependent acyltransferases
47 47 7 3 SCOP 54373 FAD-linked reductases, C-terminal domain
47 47 11 1 SCOP 52025 PA domain
46 45 7 0 SCOP 54849 GroEL-intermediate domain like
45 45 13 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
44 44 7 0 SCOP 57829 Zn-binding ribosomal proteins
44 44 5 1 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
44 43 8 2 SCOP 53254 Phosphoglycerate mutase-like
44 36 6 2 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
44 44 10 1 SCOP 81631 PAP/OAS1 substrate-binding domain
43 42 4 1 SCOP 53784 Phosphofructokinase
43 43 9 4 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
42 41 11 2 SCOP 53633 Carbamate kinase-like
42 42 8 1 SCOP 54292 2Fe-2S ferredoxin-like
42 29 5 2 SCOP 51726 UROD/MetE-like
42 42 3 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
42 42 8 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
42 42 8 1 SCOP 48445 14-3-3 protein
40 40 5 3 SCOP 53613 Ribokinase-like
40 23 9 0 SCOP 75471 YhbY-like
40 40 17 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
40 32 19 0 SCOP 52113 BRCT domain
39 39 10 1 SCOP 53850 Periplasmic binding protein-like II
39 38 8 1 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
39 38 7 1 SCOP 47661 t-snare proteins
39 39 13 1 SCOP 51011 Glycosyl hydrolase domain
39 39 6 1 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
38 31 6 2 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
38 33 9 1 SCOP 51101 Mannose-binding lectins
38 38 9 0 SCOP 49354 PapD-like
37 37 11 1 SCOP 55920 Creatinase/aminopeptidase
37 37 1 1 SCOP 49777 PEBP-like
37 15 7 1 SCOP 53738 Phosphoglucomutase, first 3 domains
36 34 13 0 SCOP 57783 Zinc beta-ribbon
36 28 17 1 SCOP 47592 SWIB/MDM2 domain
35 33 11 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
35 34 14 1 SCOP 51206 cAMP-binding domain-like
35 18 9 1 SCOP 54980 EF-G C-terminal domain-like
34 34 18 2 SCOP 56104 SAICAR synthase-like
34 29 15 1 SCOP 52440 PreATP-grasp domain
34 34 4 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
34 27 9 1 SCOP 47862 Saposin
33 33 11 0 SCOP 103657 BAR/IMD domain-like
33 33 7 3 SCOP 100950 NagB/RpiA/CoA transferase-like
33 33 5 2 SCOP 52768 Arginase/deacetylase
33 33 17 0 SCOP 144232 HIT/MYND zinc finger-like
33 32 13 1 SCOP 101690 PAZ domain
32 32 6 1 SCOP 56399 ADP-ribosylation
32 32 11 1 SCOP 51230 Single hybrid motif
32 32 7 1 SCOP 75005 Arabinanase/levansucrase/invertase
32 32 8 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
32 29 7 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
31 30 8 2 SCOP 48557 L-aspartase-like
31 31 6 3 SCOP 48150 DNA-glycosylase
31 31 5 0 SCOP 144000 Oxysterol-binding protein-like
31 11 2 1 SCOP 55973 S-adenosylmethionine synthetase
30 29 11 5 SCOP 51556 Metallo-dependent hydrolases
30 30 6 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
30 30 11 1 SCOP 88723 PIN domain-like
30 30 2 0 SCOP 47072 Cysteine alpha-hairpin motif
30 27 4 1 SCOP 53056 beta-carbonic anhydrase, cab
30 30 8 2 SCOP 52151 FabD/lysophospholipase-like
30 26 4 1 SCOP 117070 LEA14-like
30 10 5 0 SCOP 50199 Staphylococcal nuclease
30 30 4 0 SCOP 47769 SAM/Pointed domain
30 29 7 0 SCOP 158639 ENT-like
29 29 6 2 SCOP 102114 Radical SAM enzymes
29 29 5 0 SCOP 63829 Calcium-dependent phosphotriesterase
29 29 9 0 SCOP 161111 Cation efflux protein transmembrane domain-like
29 29 7 1 SCOP 55103 FAD-linked oxidases, C-terminal domain
29 23 10 1 SCOP 50370 Ricin B-like lectins
29 29 14 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
29 24 12 0 SCOP 54160 Chromo domain-like
29 24 8 0 SCOP 51045 WW domain
29 28 7 0 SCOP 55666 Ribonuclease PH domain 2-like
29 29 4 1 SCOP 81382 Skp1 dimerisation domain-like
28 28 4 1 SCOP 55282 RL5-like
28 28 8 0 SCOP 101898 NHL repeat
28 28 13 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
27 26 6 2 SCOP 53927 Cytidine deaminase-like
27 27 7 2 SCOP 52218 Flavoproteins
27 27 3 0 SCOP 51306 LexA/Signal peptidase
27 27 11 1 SCOP 47576 Calponin-homology domain, CH-domain
27 27 9 2 SCOP 55931 Glutamine synthetase/guanido kinase
27 27 4 1 SCOP 48484 Lipoxigenase
27 13 3 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
27 25 10 0 SCOP 82171 DPP6 N-terminal domain-like
27 27 10 0 SCOP 50156 PDZ domain-like
27 19 12 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
27 27 4 1 SCOP 49363 Purple acid phosphatase, N-terminal domain
27 27 3 0 SCOP 117892 Band 7/SPFH domain
26 26 4 2 SCOP 47240 Ferritin-like
26 26 4 1 SCOP 102405 MCP/YpsA-like
26 24 4 1 SCOP 54403 Cystatin/monellin
26 20 5 0 SCOP 57247 Bowman-Birk inhibitor, BBI
26 26 5 1 SCOP 49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
25 24 12 0 SCOP 161219 CHY zinc finger-like
25 24 3 1 SCOP 55724 Mog1p/PsbP-like
25 25 4 1 SCOP 53955 Lysozyme-like
25 25 10 1 SCOP 49879 SMAD/FHA domain
25 25 2 0 SCOP 54654 CI-2 family of serine protease inhibitors
25 25 10 0 SCOP 81995 beta-sandwich domain of Sec23/24
25 14 5 1 SCOP 56053 Ribosomal protein L6
25 25 5 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
24 24 5 1 SCOP 75620 Release factor
24 24 2 1 SCOP 56655 Carbohydrate phosphatase
24 20 6 1 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
24 24 6 1 SCOP 50022 ISP domain
24 23 10 4 SCOP 52467 DHS-like NAD/FAD-binding domain
24 15 6 1 SCOP 55945 TATA-box binding protein-like
24 24 6 0 SCOP 48350 GTPase activation domain, GAP
23 23 3 1 SCOP 75304 Amidase signature (AS) enzymes
23 23 9 4 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
23 23 5 1 SCOP 50475 FMN-binding split barrel
23 23 11 0 SCOP 57997 Tropomyosin
23 15 9 2 SCOP 55781 GAF domain-like
23 23 13 0 SCOP 52954 Class II aaRS ABD-related
23 23 5 0 SCOP 50800 PK beta-barrel domain-like
23 16 11 0 SCOP 69065 RNase III domain-like
23 15 9 0 SCOP 57889 Cysteine-rich domain
23 23 10 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
22 21 4 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
22 22 3 1 SCOP 49329 Cu,Zn superoxide dismutase-like
22 22 7 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
22 22 6 1 SCOP 82704 AlbA-like
22 16 7 2 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
22 22 4 0 SCOP 50405 Actin-crosslinking proteins
22 19 8 0 SCOP 54106 LysM domain
22 22 6 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
21 21 2 1 SCOP 50324 Inorganic pyrophosphatase
21 21 10 2 SCOP 109604 HD-domain/PDEase-like
21 21 10 3 SCOP 56672 DNA/RNA polymerases
21 21 4 0 SCOP 46579 Prefoldin
21 12 3 2 SCOP 54506 Diaminopimelate epimerase-like
21 21 9 1 SCOP 81340 Clc chloride channel
21 21 4 0 SCOP 57802 Rubredoxin-like
21 21 11 2 SCOP 51246 Rudiment single hybrid motif
21 21 5 1 SCOP 140990 FtsH protease domain-like
21 21 8 1 SCOP 56204 Hect, E3 ligase catalytic domain
21 21 10 0 SCOP 161245 Zinc hairpin stack
20 20 6 0 SCOP 55174 Alpha-L RNA-binding motif
20 20 9 1 SCOP 51351 Triosephosphate isomerase (TIM)
20 20 3 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
20 20 5 1 SCOP 56317 Carbon-nitrogen hydrolase
20 20 2 0 SCOP 55257 RBP11-like subunits of RNA polymerase
20 20 4 0 SCOP 64268 PX domain
20 19 4 1 SCOP 51069 Carbonic anhydrase
20 20 5 1 SCOP 53732 Aconitase iron-sulfur domain
20 20 5 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
20 20 2 1 SCOP 47874 Annexin
20 20 14 0 SCOP 55277 GYF domain
20 20 6 1 SCOP 81811 Helical domain of Sec23/24
19 16 4 1 SCOP 54570 Ribosomal protein S19
19 19 9 2 SCOP 54862 4Fe-4S ferredoxins
19 19 2 0 SCOP 55129 Ribosomal protein L30p/L7e
19 19 10 0 SCOP 47027 Acyl-CoA binding protein
19 19 6 0 SCOP 102712 JAB1/MPN domain
19 19 5 0 SCOP 63491 BAG domain
18 18 2 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
18 18 8 1 SCOP 47819 HRDC-like
18 18 3 1 SCOP 50993 Peptidase/esterase 'gauge' domain
18 18 4 1 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
18 17 8 2 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
18 18 9 0 SCOP 81923 Double Clp-N motif
18 18 3 0 SCOP 52935 PK C-terminal domain-like
18 16 5 0 SCOP 118310 AN1-like Zinc finger
18 18 9 1 SCOP 49348 Clathrin adaptor appendage domain
18 18 5 0 SCOP 82708 R3H domain
18 18 7 0 SCOP 46774 ARID-like
18 17 6 0 SCOP 57196 EGF/Laminin
18 18 2 0 SCOP 110004 Glycolipid transfer protein, GLTP
18 18 7 0 SCOP 82919 Zn-finger domain of Sec23/24
17 17 4 1 SCOP 56808 Ribosomal protein L1
17 17 2 1 SCOP 50193 Ribosomal protein L14
17 16 5 0 SCOP 47336 ACP-like
17 11 3 0 SCOP 81333 F1F0 ATP synthase subunit C
17 17 2 2 SCOP 51316 Mss4-like
17 15 3 1 SCOP 53590 Nucleoside hydrolase
17 17 6 1 SCOP 53649 Alkaline phosphatase-like
17 17 3 2 SCOP 46626 Cytochrome c
17 17 5 1 SCOP 52016 LeuD/IlvD-like
17 17 2 1 SCOP 55797 PR-1-like
17 17 8 0 SCOP 69322 Tricorn protease domain 2
17 16 5 2 SCOP 51604 Enolase C-terminal domain-like
17 17 9 0 SCOP 48334 DNA repair protein MutS, domain III
17 17 5 1 SCOP 55060 GHMP Kinase, C-terminal domain
17 17 7 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
17 17 3 0 SCOP 57095 Scorpion toxin-like
17 13 6 0 SCOP 47762 PAH2 domain
17 6 4 0 SCOP 81698 FF domain
17 17 4 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
16 16 5 2 SCOP 53697 SIS domain
16 16 4 1 SCOP 75217 alpha/beta knot
16 16 6 2 SCOP 51419 PLP-binding barrel
16 16 3 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
16 16 5 1 SCOP 55159 eIF1-like
16 12 2 1 SCOP 54909 Dimeric alpha+beta barrel
16 16 3 1 SCOP 89124 Nop domain
16 16 3 1 SCOP 48225 Seven-hairpin glycosidases
16 16 8 0 SCOP 68906 SAP domain
16 16 2 1 SCOP 56327 LDH C-terminal domain-like
16 12 3 0 SCOP 109905 Surp module (SWAP domain)
16 16 5 0 SCOP 54368 Glutamine synthetase, N-terminal domain
16 16 5 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
16 11 5 1 SCOP 54416 Amine oxidase N-terminal region
16 16 5 1 SCOP 63887 P-domain of calnexin/calreticulin
15 15 5 0 SCOP 46946 S13-like H2TH domain
15 15 3 0 SCOP 48140 Ribosomal protein L19 (L19e)
15 14 7 1 SCOP 52949 Macro domain-like
15 15 1 0 SCOP 144122 Tim10-like
15 15 3 1 SCOP 56815 Sec1/munc18-like (SM) proteins
15 15 6 0 SCOP 50044 SH3-domain
15 15 3 1 SCOP 56529 FAH
15 15 4 1 SCOP 55770 Profilin (actin-binding protein)
15 14 5 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
15 15 4 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
15 15 4 2 SCOP 52922 TK C-terminal domain-like
15 15 5 1 SCOP 54826 Enolase N-terminal domain-like
15 14 7 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
15 13 9 0 SCOP 57933 TAZ domain
15 13 4 0 SCOP 140383 BSD domain-like
14 13 5 2 SCOP 54197 HIT-like
14 14 3 1 SCOP 54843 Ribosomal protein L22
14 14 1 1 SCOP 56047 Ribosomal protein S8
14 14 5 0 SCOP 110324 Ribosomal L27 protein-like
14 14 3 1 SCOP 52313 Ribosomal protein S2
14 14 3 1 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
14 14 2 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
14 14 3 1 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
14 9 3 2 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
14 14 4 0 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
14 14 3 0 SCOP 53822 Periplasmic binding protein-like I
14 12 7 0 SCOP 47781 RuvA domain 2-like
14 13 8 0 SCOP 49452 Starch-binding domain-like
14 11 4 1 SCOP 55979 DNA clamp
14 14 5 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
14 14 8 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
14 14 5 0 SCOP 158573 GINS helical bundle-like
14 14 6 0 SCOP 110942 HSP90 C-terminal domain
14 14 3 0 SCOP 103243 KA1-like
14 14 6 0 SCOP 101238 XPC-binding domain
13 13 3 1 SCOP 52080 Ribosomal proteins L15p and L18e
13 12 4 1 SCOP 53748 Phosphoglycerate kinase
13 13 3 0 SCOP 46561 Ribosomal protein L29 (L29p)
13 13 2 1 SCOP 48256 Citrate synthase
13 13 1 1 SCOP 57798 Casein kinase II beta subunit
13 13 5 1 SCOP 48439 Protein prenylyltransferase
13 9 3 1 SCOP 69645 Arp2/3 complex subunits
13 13 1 0 SCOP 55331 Tautomerase/MIF
13 13 2 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
13 13 2 0 SCOP 54736 ClpS-like
13 12 5 1 SCOP 50814 Lipocalins
13 7 4 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
13 13 5 0 SCOP 48019 post-AAA+ oligomerization domain-like
13 13 4 0 SCOP 160059 PriA/YqbF domain
13 8 4 1 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
13 13 6 1 SCOP 81271 TGS-like
13 13 2 0 SCOP 81531 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
13 13 4 1 SCOP 75632 Cullin homology domain
13 13 2 0 SCOP 57016 Plant lectins/antimicrobial peptides
13 13 7 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
13 13 11 0 SCOP 159042 Plus3-like
13 12 8 1 SCOP 54585 Cdc48 domain 2-like
12 12 2 1 SCOP 103491 Preprotein translocase SecY subunit
12 12 1 0 SCOP 52042 Ribosomal protein L32e
12 12 2 0 SCOP 52091 SpoIIaa-like
12 12 5 0 SCOP 160443 SMR domain-like
12 12 3 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
12 12 3 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
12 12 5 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
12 12 5 0 SCOP 48340 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
12 12 3 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
12 12 2 1 SCOP 81822 RuBisCo LSMT C-terminal, substrate-binding domain
11 11 8 1 SCOP 52980 Restriction endonuclease-like
11 11 4 2 SCOP 55821 YrdC/RibB
11 11 2 0 SCOP 89360 HesB-like domain
11 11 2 1 SCOP 56276 S-adenosylmethionine decarboxylase
11 11 3 1 SCOP 64005 Undecaprenyl diphosphate synthase
11 11 7 0 SCOP 101908 Putative isomerase YbhE
11 11 1 1 SCOP 111352 Ammonium transporter
11 11 2 0 SCOP 103256 Hypothetical protein TM0160
11 11 3 1 SCOP 54447 ssDNA-binding transcriptional regulator domain
11 11 4 1 SCOP 48600 Chorismate mutase II
11 10 3 0 SCOP 55136 Probable bacterial effector-binding domain
11 11 3 1 SCOP 54626 Chalcone isomerase
11 11 2 0 SCOP 160374 RplX-like
11 11 4 0 SCOP 141673 MOSC N-terminal domain-like
11 11 5 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
11 11 3 0 SCOP 47938 Functional domain of the splicing factor Prp18
11 11 2 1 SCOP 89942 eEF1-gamma domain
11 11 5 0 SCOP 50916 Rap30/74 interaction domains
10 10 3 1 SCOP 54999 Ribosomal protein S10
10 10 3 2 SCOP 54686 Ribosomal protein L16p/L10e
10 10 3 1 SCOP 48613 Heme oxygenase-like
10 10 2 1 SCOP 54648 DLC
10 10 1 2 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
10 10 4 1 SCOP 52972 ITPase-like
10 10 5 1 SCOP 88713 Glycoside hydrolase/deacetylase
10 10 4 1 SCOP 64167 SurE-like
10 9 4 1 SCOP 51338 Composite domain of metallo-dependent hydrolases
10 10 6 1 SCOP 46548 alpha-helical ferredoxin
10 10 3 1 SCOP 56003 Molybdenum cofactor-binding domain
10 10 2 1 SCOP 48537 Phospholipase C/P1 nuclease
10 10 3 1 SCOP 50621 Alanine racemase C-terminal domain-like
10 10 5 1 SCOP 56371 Ribosome inactivating proteins (RIP)
10 10 4 0 SCOP 52075 Outer arm dynein light chain 1
10 10 6 1 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
10 10 5 1 SCOP 49998 Amine oxidase catalytic domain
10 10 5 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
10 10 5 0 SCOP 57184 Growth factor receptor domain
10 10 2 1 SCOP 101152 Mob1/phocein
10 10 5 0 SCOP 47895 Transducin (alpha subunit), insertion domain
10 10 2 0 SCOP 144074 E2F-DP heterodimerization region
10 10 5 1 SCOP 88688 Families 57/38 glycoside transferase middle domain
10 10 3 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
10 10 3 0 SCOP 160219 AMPKBI-like
10 10 3 0 SCOP 144256 TSP9-like
10 10 4 0 SCOP 158230 PRP4-like
9 9 1 0 SCOP 53167 Purine and uridine phosphorylases
9 9 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
9 9 2 0 SCOP 160369 Ribosomal protein L10-like
9 9 3 1 SCOP 52161 Ribosomal protein L13
9 9 3 0 SCOP 47060 S15/NS1 RNA-binding domain
9 9 4 1 SCOP 50715 Ribosomal protein L25-like
9 9 3 1 SCOP 56634 Heme-dependent catalase-like
9 9 2 0 SCOP 52499 Isochorismatase-like hydrolases
9 9 3 1 SCOP 56019 The spindle assembly checkpoint protein mad2
9 9 1 1 SCOP 118203 Vacuolar ATP synthase subunit C
9 9 2 1 SCOP 55418 eIF4e-like
9 9 4 0 SCOP 141571 Pentapeptide repeat-like
9 9 3 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
9 8 6 1 SCOP 53218 Molybdenum cofactor biosynthesis proteins
9 9 2 1 SCOP 102198 Putative cyclase
9 9 3 1 SCOP 54984 eEF-1beta-like
9 9 2 0 SCOP 143437 THUMP domain-like
9 9 3 1 SCOP 55895 Ribonuclease Rh-like
9 9 4 0 SCOP 46589 tRNA-binding arm
9 9 3 1 SCOP 52210 Succinyl-CoA synthetase domains
9 9 5 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
9 9 3 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
9 9 3 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
9 9 8 1 SCOP 81837 BEACH domain
9 9 5 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
9 9 5 0 SCOP 57414 Hairpin loop containing domain-like
9 9 3 0 SCOP 54529 Mitochondrial glycoprotein MAM33-like
9 9 4 0 SCOP 140111 Endosomal sorting complex assembly domain
9 9 3 0 SCOP 109715 DEK C-terminal domain
9 9 1 1 SCOP 116768 DNA-binding domain of EIN3-like
8 8 3 1 SCOP 53790 Tetrapyrrole methylase
8 8 1 1 SCOP 47973 Ribosomal protein S7
8 8 4 0 SCOP 143800 L28p-like
8 8 3 1 SCOP 82649 SufE/NifU
8 8 5 1 SCOP 55194 Ribosome recycling factor, RRF
8 8 4 1 SCOP 56322 ADC synthase
8 8 3 0 SCOP 82282 Homocysteine S-methyltransferase
8 8 4 0 SCOP 58113 Apolipoprotein A-I
8 8 1 0 SCOP 50090 Electron transport accessory proteins
8 8 5 1 SCOP 50692 ADC-like
8 8 2 1 SCOP 56762 HydB/Nqo4-like
8 8 3 1 SCOP 101112 Oxygen-evolving enhancer protein 3,
8 8 6 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
8 8 2 0 SCOP 56821 Prismane protein-like
8 8 2 1 SCOP 56726 DNA topoisomerase IV, alpha subunit
8 8 1 0 SCOP 48619 Phospholipase A2, PLA2
8 8 2 0 SCOP 81464 Cytochrome c oxidase subunit II-like, transmembrane region
8 8 3 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
8 8 3 0 SCOP 54752 RecA protein, C-terminal domain
8 8 3 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
8 8 3 1 SCOP 47446 Signal peptide-binding domain
8 8 2 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
8 8 2 1 SCOP 118359 Expressed protein At2g23090/F21P24.15
8 8 3 1 SCOP 69012 alpha-ketoacid dehydrogenase kinase, N-terminal domain
8 8 5 1 SCOP 48425 Sec7 domain
8 8 4 1 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
8 8 2 0 SCOP 50911 Mannose 6-phosphate receptor domain
8 8 3 0 SCOP 57277 Granulin repeat
8 8 6 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
8 8 6 0 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
8 8 4 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
7 4 3 0 SCOP 56214 4'-phosphopantetheinyl transferase
7 7 5 1 SCOP 53597 Dihydrofolate reductase-like
7 7 2 1 SCOP 51658 Xylose isomerase-like
7 7 2 1 SCOP 103263 Chorismate synthase, AroC
7 7 2 1 SCOP 55387 Frataxin/Nqo15-like
7 7 1 0 SCOP 54575 Ribosomal protein L31e
7 7 2 0 SCOP 140718 Mediator hinge subcomplex-like
7 7 4 0 SCOP 63393 RNA polymerase subunits
7 7 2 1 SCOP 55144 LigT-like
7 7 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
7 6 2 2 SCOP 55909 Pentein
7 7 3 1 SCOP 53800 Chelatase
7 7 1 0 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
7 7 2 1 SCOP 56574 Serpins
7 7 7 1 SCOP 55186 ThrRS/AlaRS common domain
7 7 2 1 SCOP 102462 Peptidyl-tRNA hydrolase II
7 7 1 1 SCOP 102645 CoaB-like
7 7 4 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
7 7 3 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
7 7 4 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
7 7 5 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
7 7 3 1 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
7 7 2 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
7 7 2 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
7 7 2 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
7 7 3 1 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
7 7 3 1 SCOP 47741 CO dehydrogenase ISP C-domain like
7 5 3 0 SCOP 55550 SH2 domain
7 7 3 1 SCOP 69000 FAD-dependent thiol oxidase
7 7 4 0 SCOP 63570 PABC (PABP) domain
7 7 3 0 SCOP 47672 Transferrin receptor-like dimerisation domain
7 7 3 0 SCOP 47050 VHP, Villin headpiece domain
7 5 4 0 SCOP 143791 DUSP-like
7 7 6 0 SCOP 75553 Smc hinge domain
7 7 3 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
7 7 2 1 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
7 7 3 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
7 7 2 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
6 6 2 0 SCOP 64182 DHH phosphoesterases
6 6 2 0 SCOP 143034 L35p-like
6 6 4 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
6 6 2 1 SCOP 56770 HydA/Nqo6-like
6 6 1 1 SCOP 52121 Lumazine synthase
6 6 2 0 SCOP 47694 Cytochrome c oxidase subunit h
6 6 2 1 SCOP 143113 NAP-like
6 6 4 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
6 6 2 1 SCOP 46924 RNA polymerase subunit RPB10
6 6 2 0 SCOP 48690 Epsilon subunit of mitochondrial F1F0-ATP synthase
6 6 2 1 SCOP 81342 Transmembrane di-heme cytochromes
6 6 2 1 SCOP 81568 Photosystem I reaction center subunit XI, PsaL
6 6 1 0 SCOP 55718 SCP-like
6 6 2 1 SCOP 118196 YaeB-like
6 6 3 0 SCOP 47413 lambda repressor-like DNA-binding domains
6 6 4 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
6 6 3 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
6 6 2 0 SCOP 143456 VC0467-like
6 6 1 1 SCOP 51219 TRAP-like
6 6 2 1 SCOP 74784 Translin
6 6 1 1 SCOP 111321 AF1104-like
6 6 2 0 SCOP 55287 RPB5-like RNA polymerase subunit
6 6 2 0 SCOP 69695 SRP19
6 6 4 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
6 6 3 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
6 6 4 1 SCOP 56719 Type II DNA topoisomerase
6 6 3 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
6 6 3 0 SCOP 55658 L9 N-domain-like
6 6 1 0 SCOP 49265 Fibronectin type III
6 6 1 1 SCOP 48056 Di-copper centre-containing domain
6 6 5 0 SCOP 81891 Poly A polymerase C-terminal region-like
6 6 3 0 SCOP 143548 Serine metabolism enzymes domain
6 6 2 0 SCOP 69075 Glutamyl tRNA-reductase dimerization domain
6 6 1 0 SCOP 47794 Rad51 N-terminal domain-like
6 5 5 1 SCOP 158702 Sec63 N-terminal domain-like
6 6 2 0 SCOP 47933 ERP29 C domain-like
6 6 4 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
6 6 3 0 SCOP 102735 Trigger factor ribosome-binding domain
6 6 5 0 SCOP 74924 Cap-Gly domain
6 6 4 0 SCOP 101233 PWI domain
6 6 2 0 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
6 6 2 1 SCOP 51649 RuBisCo, C-terminal domain
6 6 2 1 SCOP 54966 RuBisCO, large subunit, small (N-terminal) domain
6 6 2 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
6 6 1 0 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
5 5 1 1 SCOP 56420 Peptide deformylase
5 5 3 1 SCOP 52166 Ribosomal protein L4
5 5 3 1 SCOP 51730 FAD-linked oxidoreductase
5 5 1 1 SCOP 55205 EPT/RTPC-like
5 5 2 0 SCOP 82657 BolA-like
5 5 2 1 SCOP 56796 Dehydroquinate synthase-like
5 5 2 0 SCOP 144217 CSL zinc finger
5 5 3 0 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
5 5 2 0 SCOP 142897 TFB5-like
5 5 1 0 SCOP 103456 Preprotein translocase SecE subunit
5 5 4 1 SCOP 53328 Formyltransferase
5 5 3 0 SCOP 54897 Protease propeptides/inhibitors
5 5 1 0 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
5 5 1 0 SCOP 110849 ParB/Sulfiredoxin
5 5 2 1 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
5 5 1 1 SCOP 161045 Cytochrome b559 subunits
5 5 2 0 SCOP 111038 YjbQ-like
5 5 2 1 SCOP 53795 PEP carboxykinase-like
5 5 3 0 SCOP 158615 RbcX-like
5 5 5 0 SCOP 55154 CYTH-like phosphatases
5 5 4 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
5 5 2 0 SCOP 69786 YggU-like
5 5 4 0 SCOP 100939 SPOC domain-like
5 5 2 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
5 5 4 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
5 5 2 1 SCOP 52009 Phosphohistidine domain
5 5 3 0 SCOP 52129 Caspase-like
5 5 3 0 SCOP 49464 Carboxypeptidase regulatory domain-like
5 5 4 0 SCOP 90257 Myosin rod fragments
5 5 1 0 SCOP 144206 NOB1 zinc finger-like
5 5 3 1 SCOP 68923 PEP carboxykinase N-terminal domain
5 4 4 1 SCOP 56042 PurM C-terminal domain-like
5 5 2 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
5 3 2 0 SCOP 55116 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
5 5 4 0 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
5 5 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
5 5 2 1 SCOP 141493 Allene oxide cyclase-like
5 5 1 0 SCOP 116742 eIF2alpha middle domain-like
5 3 3 0 SCOP 55394 Bactericidal permeability-increasing protein, BPI
5 5 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
5 5 1 1 SCOP 110993 eIF-2-alpha, C-terminal domain
5 5 3 0 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
5 5 2 0 SCOP 160527 V-type ATPase subunit E-like
5 5 3 0 SCOP 46942 Elongation factor TFIIS domain 2
5 5 2 0 SCOP 143503 PUG domain-like
5 5 2 0 SCOP 55653 Ribosomal protein L9 C-domain
4 4 3 0 SCOP 48013 NusB-like
4 4 1 0 SCOP 161098 MetI-like
4 4 2 0 SCOP 82607 YbaB-like
4 4 2 1 SCOP 64263 Prokaryotic ribosomal protein L17
4 4 2 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
4 4 1 0 SCOP 141091 L21p-like
4 4 3 1 SCOP 55068 Peptide methionine sulfoxide reductase
4 4 2 1 SCOP 51713 tRNA-guanine transglycosylase
4 4 2 1 SCOP 142695 RibA-like
4 3 2 1 SCOP 55298 YjgF-like
4 4 1 0 SCOP 141678 MAL13P1.257-like
4 4 1 0 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
4 4 1 0 SCOP 159468 AtpF-like
4 4 1 0 SCOP 103486 V-type ATP synthase subunit C
4 4 1 0 SCOP 143447 AMMECR1-like
4 4 1 1 SCOP 63562 RPB6/omega subunit-like
4 4 1 1 SCOP 81536 Subunit III of photosystem I reaction centre, PsaF
4 4 2 1 SCOP 55239 RuBisCO, small subunit
4 4 2 0 SCOP 143243 Nqo5-like
4 2 1 0 SCOP 46955 Putative DNA-binding domain
4 4 2 1 SCOP 56266 DmpA/ArgJ-like
4 4 2 1 SCOP 54111 Urease, gamma-subunit
4 4 3 1 SCOP 55826 YbaK/ProRS associated domain
4 4 2 1 SCOP 101386 all-alpha NTP pyrophosphatases
4 4 2 0 SCOP 141130 Acetamidase/Formamidase-like
4 4 1 0 SCOP 50939 Sialidases
4 4 3 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
4 4 3 0 SCOP 160631 SMI1/KNR4-like
4 4 1 0 SCOP 142535 AF0625-like
4 4 2 0 SCOP 160350 Rnp2-like
4 4 4 0 SCOP 53092 Creatinase/prolidase N-terminal domain
4 4 3 0 SCOP 52200 Toll/Interleukin receptor TIR domain
4 4 3 0 SCOP 63825 YWTD domain
4 2 1 0 SCOP 53681 Aspartate/glutamate racemase
4 4 3 0 SCOP 47090 PGBD-like
4 4 2 1 SCOP 110019 ERO1-like
4 3 3 1 SCOP 55326 PurM N-terminal domain-like
4 4 3 1 SCOP 55637 Cell cycle regulatory proteins
4 4 2 0 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
4 4 2 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
4 4 1 0 SCOP 140860 Pseudo ankyrin repeat-like
4 4 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
4 4 3 0 SCOP 55271 DNA repair protein MutS, domain I
4 4 2 0 SCOP 110221 AbfB domain
4 4 1 1 SCOP 89817 Mago nashi protein
4 4 2 1 SCOP 82109 MIR domain
4 4 3 1 SCOP 109993 VPS9 domain
4 2 2 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
4 4 3 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
4 4 1 0 SCOP 57774 Microbial and mitochondrial ADK, insert "zinc finger" domain
4 4 1 0 SCOP 47040 Kix domain of CBP (creb binding protein)
4 4 1 0 SCOP 54556 Chitinase insertion domain
4 4 2 0 SCOP 69848 LCCL domain
4 4 3 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
4 4 4 1 SCOP 49441 Cytochrome f, large domain
4 4 4 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
4 4 1 0 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
4 4 4 0 SCOP 47587 Domain of poly(ADP-ribose) polymerase
4 4 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
3 3 1 0 SCOP 46911 Ribosomal protein S18
3 3 2 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
3 3 1 0 SCOP 54285 MoaD/ThiS
3 3 3 0 SCOP 54995 Ribosomal protein S6
3 3 1 1 SCOP 69500 DTD-like
3 3 1 0 SCOP 55248 PCD-like
3 3 1 0 SCOP 51645 Malate synthase G
3 3 1 1 SCOP 81442 Cytochrome c oxidase subunit I-like
3 3 3 1 SCOP 101960 Stabilizer of iron transporter SufD
3 3 1 1 SCOP 57662 Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
3 3 1 0 SCOP 161055 PsbZ-like
3 3 2 1 SCOP 101546 ASF1-like
3 3 2 1 SCOP 51717 Dihydropteroate synthetase-like
3 3 2 0 SCOP 142754 NadA-like
3 3 2 0 SCOP 58100 Bacterial hemolysins
3 3 3 0 SCOP 89550 PHP domain-like
3 3 2 0 SCOP 159501 EreA/ChaN-like
3 3 2 0 SCOP 140663 TTHA0068-like
3 3 3 0 SCOP 102588 LmbE-like
3 3 2 1 SCOP 110069 ApaG-like
3 3 2 1 SCOP 52335 Methylglyoxal synthase-like
3 3 1 0 SCOP 64076 MTH938-like
3 3 2 1 SCOP 56925 OMPA-like
3 3 1 0 SCOP 142764 YgbK-like
3 3 1 1 SCOP 89562 RraA-like
3 3 2 0 SCOP 46950 Double-stranded DNA-binding domain
3 2 2 0 SCOP 50346 PRC-barrel domain
3 3 2 0 SCOP 158832 Tex N-terminal region-like
3 3 3 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
3 2 2 0 SCOP 89372 Fucose-specific lectin
3 3 1 1 SCOP 82114 Riboflavin kinase-like
3 2 2 0 SCOP 69304 Tricorn protease N-terminal domain
3 3 1 0 SCOP 141255 YccV-like
3 3 1 0 SCOP 102110 (2r)-phospho-3-sulfolactate synthase ComA
3 3 3 1 SCOP 142921 WGR domain-like
3 3 2 1 SCOP 142877 EndoU-like
3 3 3 0 SCOP 118116 DNA mismatch repair protein MutL
3 3 1 0 SCOP 56436 C-type lectin-like
3 3 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
3 3 1 1 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
3 3 2 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
3 3 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
3 3 1 0 SCOP 56973 Aerolisin/ETX pore-forming domain
3 2 2 1 SCOP 140102 ISY1 domain-like
3 2 2 1 SCOP 109920 Hypothetical protein At3g22680
3 3 3 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
3 3 2 1 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
3 3 2 0 SCOP 82895 TSP-1 type 1 repeat
3 3 1 0 SCOP 140427 VPS28 C-terminal domain-like
3 3 1 0 SCOP 101931 Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain
3 3 1 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
3 3 3 0 SCOP 49758 Calpain large subunit, middle domain (domain III)
3 3 2 0 SCOP 140612 EB1 dimerisation domain-like
3 3 2 0 SCOP 101420 C-terminal domain of Ku80
3 3 1 0 SCOP 81502 ISP transmembrane anchor
3 3 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
3 3 2 0 SCOP 101821 Aminopeptidase/glucanase lid domain
3 3 2 0 SCOP 53150 DNA repair protein MutS, domain II
3 3 3 0 SCOP 101224 HAND domain of the nucleosome remodeling ATPase ISWI
3 3 1 0 SCOP 50382 Agglutinin
2 2 1 0 SCOP 56731 DNA primase core
2 2 2 0 SCOP 57840 Ribosomal protein L36
2 2 1 1 SCOP 74731 Ribosomal protein L20
2 2 2 1 SCOP 82549 DAK1/DegV-like
2 2 2 1 SCOP 75625 YebC-like
2 2 2 0 SCOP 54565 Ribosomal protein S16
2 2 1 1 SCOP 69765 IpsF-like
2 2 2 1 SCOP 51283 dUTPase-like
2 2 1 1 SCOP 81452 Cytochrome c oxidase subunit III-like
2 1 1 0 SCOP 55469 FMN-dependent nitroreductase-like
2 2 1 0 SCOP 103464 Oligosaccharyltransferase subunit ost4p
2 2 2 0 SCOP 111278 SSo0622-like
2 2 1 0 SCOP 144210 Nop10-like SnoRNP
2 2 1 0 SCOP 81508 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
2 2 1 0 SCOP 140959 Indolic compounds 2,3-dioxygenase-like
2 2 1 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
2 2 1 0 SCOP 46988 Tubulin chaperone cofactor A
2 2 1 0 SCOP 69618 HemD-like
2 2 2 1 SCOP 46458 Globin-like
2 2 1 1 SCOP 64234 Photosystem I subunit PsaD
2 2 2 0 SCOP 161037 Photosystem II reaction center protein K, PsbK
2 2 1 0 SCOP 161084 MAPEG domain-like
2 2 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
2 2 2 0 SCOP 82771 GIY-YIG endonuclease
2 2 1 0 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
2 2 1 0 SCOP 101744 Rof/RNase P subunit-like
2 2 2 1 SCOP 54913 GlnB-like
2 2 2 0 SCOP 116842 XseB-like
2 2 2 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
2 2 1 1 SCOP 143081 BB1717-like
2 2 1 0 SCOP 54975 Acylphosphatase/BLUF domain-like
2 2 2 0 SCOP 158997 Trm112p-like
2 2 1 1 SCOP 53213 LigB-like
2 2 1 0 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
2 2 2 1 SCOP 103025 Folate-binding domain
2 2 1 1 SCOP 110581 Indigoidine synthase A-like
2 2 1 0 SCOP 142338 CofD-like
2 2 2 1 SCOP 50486 FMT C-terminal domain-like
2 2 1 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
2 2 1 0 SCOP 158710 PSPTO4464-like
2 2 1 0 SCOP 116820 Rps17e-like
2 2 2 0 SCOP 63867 MoeA C-terminal domain-like
2 2 2 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
2 2 1 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
2 2 2 0 SCOP 49695 gamma-Crystallin-like
2 2 1 0 SCOP 55234 Cyanase C-terminal domain
2 2 2 0 SCOP 51971 Nucleotide-binding domain
2 2 1 0 SCOP 56037 PheT/TilS domain
2 2 2 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
2 2 1 0 SCOP 75704 Mitotic arrest deficient-like 1, Mad1
2 2 1 0 SCOP 142984 Nqo1 middle domain-like
2 2 2 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
2 2 1 1 SCOP 101904 GyrA/ParC C-terminal domain-like
2 2 2 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
2 2 1 0 SCOP 110836 Hypothetical protein SAV1430
2 2 2 0 SCOP 117289 Nucleoporin domain
2 2 1 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
2 2 1 0 SCOP 140490 Nqo1C-terminal domain-like
2 2 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
2 2 2 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
2 2 1 0 SCOP 55904 Ornithine decarboxylase C-terminal domain
2 2 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
2 2 1 1 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
2 2 2 0 SCOP 116846 MIT domain
2 2 1 0 SCOP 161065 ATP synthase D chain-like
2 2 1 1 SCOP 143875 ERH-like
2 2 2 0 SCOP 140856 USP8 N-terminal domain-like
2 2 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
2 2 1 0 SCOP 88645 ssDNA viruses
2 2 2 1 SCOP 50989 Clathrin heavy-chain terminal domain
2 2 1 0 SCOP 47031 Second domain of FERM
2 2 2 1 SCOP 160897 Taf5 N-terminal domain-like
2 2 2 0 SCOP 64586 C-terminal domain of ProRS
2 2 2 0 SCOP 140586 Dcp2 domain-like
2 2 2 0 SCOP 103431 Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor
2 2 2 1 SCOP 81767 Pre-protein crosslinking domain of SecA
2 2 1 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
2 2 1 0 SCOP 102741 Obg GTP-binding protein C-terminal domain
2 2 1 0 SCOP 160996 HI0933 insert domain-like
1 1 1 1 SCOP 52141 Uracil-DNA glycosylase-like
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
1 1 1 0 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
1 1 1 0 SCOP 117991 YbeD/HP0495-like
1 1 1 0 SCOP 81321 Family A G protein-coupled receptor-like
1 1 1 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
1 1 1 1 SCOP 102886 Coproporphyrinogen III oxidase
1 1 1 0 SCOP 48662 Ribosomal protein L39e
1 1 1 0 SCOP 53639 AraD/HMP-PK domain-like
1 1 1 0 SCOP 143870 PF0523-like
1 1 1 1 SCOP 64153 YjeF N-terminal domain-like
1 1 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
1 1 1 0 SCOP 141734 HisI-like
1 1 1 0 SCOP 81563 Photosystem I reaction center subunit X, PsaK
1 1 1 1 SCOP 81483 Bacterial photosystem II reaction centre, L and M subunits
1 1 1 0 SCOP 49478 Cna protein B-type domain
1 1 1 0 SCOP 144020 FdhE-like
1 1 1 0 SCOP 56601 beta-lactamase/transpeptidase-like
1 1 1 0 SCOP 103642 Sec-C motif
1 1 1 1 SCOP 51998 PFL-like glycyl radical enzymes
1 1 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 0 SCOP 82697 PurS-like
1 1 1 0 SCOP 56349 DNA breaking-rejoining enzymes
1 1 1 0 SCOP 103441 PetM subunit of the cytochrome b6f complex
1 1 1 1 SCOP 143990 YbiA-like
1 1 1 0 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 0 SCOP 50956 Thermostable phytase (3-phytase)
1 1 1 1 SCOP 51278 Urease, beta-subunit
1 1 1 1 SCOP 51391 Thiamin phosphate synthase
1 1 1 0 SCOP 89095 GatB/YqeY motif
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 1 SCOP 160909 ATP12-like
1 1 1 1 SCOP 101473 DhaL-like
1 1 1 0 SCOP 159659 Cgl1923-like
1 1 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
1 1 1 0 SCOP 48695 Multiheme cytochromes
1 1 1 0 SCOP 50974 Nitrous oxide reductase, N-terminal domain
1 1 1 0 SCOP 143865 CorA soluble domain-like
1 1 1 0 SCOP 50960 TolB, C-terminal domain
1 1 1 0 SCOP 82093 Heme chaperone CcmE
1 1 1 0 SCOP 69318 Integrin alpha N-terminal domain
1 1 1 0 SCOP 55608 Homing endonucleases
1 1 1 0 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 0 SCOP 158745 LanC-like
1 1 1 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 58022 XRCC4, C-terminal oligomerization domain
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 110111 Ctag/Cox11
1 1 1 0 SCOP 117074 Hypothetical protein PA1324
1 1 1 0 SCOP 68912 Rho N-terminal domain-like
1 1 1 1 SCOP 53920 Fe-only hydrogenase
1 1 1 1 SCOP 140869 GUN4-like
1 1 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
1 1 1 0 SCOP 63418 MurE/MurF N-terminal domain
1 1 1 1 SCOP 63882 MoeA N-terminal region -like
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 48508 Nuclear receptor ligand-binding domain
1 1 1 1 SCOP 140984 PTPA-like
1 1 1 0 SCOP 103107 Hypothetical protein c14orf129, hspc210
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 1 SCOP 50386 STI-like
1 1 1 0 SCOP 100897 Plant proteinase inhibitors
1 1 1 0 SCOP 144292 occludin/ELL-like
1 1 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 0 SCOP 81886 Helical scaffold and wing domains of SecA
1 1 1 1 SCOP 47212 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
1 1 1 0 SCOP 81872 BRCA2 helical domain
1 1 1 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
1 1 1 0 SCOP 88802 Pre-PUA domain
1 1 1 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
1 1 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
1 1 1 0 SCOP 109736 FGAM synthase PurL, linker domain
1 1 1 0 SCOP 81878 BRCA2 tower domain

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The following superfamilies have one or more weak hits:

SCOP superfamily Troponin coil-coiled subunits
SCOP superfamily Notch domain
SCOP superfamily Somatomedin B domain
SCOP superfamily Mollusk pheromone
SCOP superfamily Neurotransmitter-gated ion-channel transmembrane pore
SCOP superfamily Hypothetical protein TM0875
SCOP superfamily Hypothetical protein VC0424
SCOP superfamily CoA-transferase family III (CaiB/BaiF)
SCOP superfamily L-sulfolactate dehydrogenase-like
SCOP superfamily Adsorption protein p2
SCOP superfamily Gametocyte protein Pfg27
SCOP superfamily Group I dsDNA viruses
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily OsmC-like
SCOP superfamily Probable GTPase Der, C-terminal domain
SCOP superfamily GckA/TtuD-like
SCOP superfamily BAH domain
SCOP superfamily C-terminal domain of DFF45/ICAD (DFF-C domain)
SCOP superfamily Group V grass pollen allergen
SCOP superfamily PsbU/PolX domain-like
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Subunit VIII of photosystem I reaction centre, PsaI
SCOP superfamily Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIa
SCOP superfamily ABC transporter involved in vitamin B12 uptake, BtuC
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily Adenylylcyclase toxin (the edema factor)
SCOP superfamily C-terminal domain of mollusc hemocyanin
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Chemotaxis phosphatase CheZ
SCOP superfamily Monomethylamine methyltransferase MtmB
SCOP superfamily Major surface antigen p30, SAG1
SCOP superfamily Lamin A/C globular tail domain
SCOP superfamily Variable surface antigen VlsE
SCOP superfamily TolA/TonB C-terminal domain
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily Head and neck region of the ectodomain of NDV fusion glycoprotein
SCOP superfamily NSP3 homodimer
SCOP superfamily Cell wall binding repeat
SCOP superfamily Nucleoplasmin-like core domain
SCOP superfamily Penicillin-binding protein associated domain
SCOP superfamily Quinohemoprotein amine dehydrogenase C chain
SCOP superfamily Nuclear receptor coactivator interlocking domain
SCOP superfamily AhpD-like
SCOP superfamily Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain
SCOP superfamily Bcr-Abl oncoprotein oligomerization domain
SCOP superfamily FAT domain of focal adhesion kinase
SCOP superfamily Recombination endonuclease VII, C-terminal and dimerization domains
SCOP superfamily Intermediate filament protein, coiled coil region
SCOP superfamily Phase 1 flagellin
SCOP superfamily Outer capsid protein sigma 3
SCOP superfamily CNF1/YfiH-like putative cysteine hydrolases
SCOP superfamily Hsp33 domain
SCOP superfamily SirA-like
SCOP superfamily Precorrin-8X methylmutase CbiC/CobH
SCOP superfamily Pyridoxine 5'-phosphate synthase
SCOP superfamily Methuselah ectodomain
SCOP superfamily Ribonuclease domain of colicin E3
SCOP superfamily SAND domain-like
SCOP superfamily Nicotinic receptor ligand binding domain-like
SCOP superfamily Ganglioside M2 (gm2) activator
SCOP superfamily Olfactory marker protein
SCOP superfamily Telomeric repeat binding factor (TRF) dimerisation domain
SCOP superfamily Flagellar transcriptional activator FlhD
SCOP superfamily PTS-regulatory domain, PRD
SCOP superfamily Outer surface protein C (OspC)
SCOP superfamily Frizzled cysteine-rich domain
SCOP superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain
SCOP superfamily Colicin Ia, N-terminal domain
SCOP superfamily Variant surface glycoprotein (N-terminal domain)
SCOP superfamily N-terminal coiled coil domain from apc
SCOP superfamily Fibritin
SCOP superfamily Outer membrane lipoprotein
SCOP superfamily Delta-sleep-inducing peptide immunoreactive peptide
SCOP superfamily Coiled-coil dimerization domain from cortexillin I
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Chicken cartilage matrix protein
SCOP superfamily Trimerization domain of TRAF
SCOP superfamily Inhibitor of apoptosis (IAP) repeat
SCOP superfamily Ada DNA repair protein, N-terminal domain (N-Ada 10)
SCOP superfamily Zinc domain conserved in yeast copper-regulated transcription factors
SCOP superfamily Metallothionein
SCOP superfamily B-box zinc-binding domain
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
SCOP superfamily Hypothetical protein MTH1184
SCOP superfamily Zn2/Cys6 DNA-binding domain
SCOP superfamily GLA-domain
SCOP superfamily TB module/8-cys domain
SCOP superfamily Serine protease inhibitors
SCOP superfamily Complement control module/SCR domain
SCOP superfamily Cystine-knot cytokines
SCOP superfamily Trefoil
SCOP superfamily Kringle-like
SCOP superfamily LDL receptor-like module
SCOP superfamily Neurotoxin III (ATX III)
SCOP superfamily Snake toxin-like
SCOP superfamily PMP inhibitors
SCOP superfamily Elafin-like
SCOP superfamily Cellulose-binding domain
SCOP superfamily Cyclotides
SCOP superfamily Insulin-like
SCOP superfamily Viral glycoprotein, central and dimerisation domains
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily Porins
SCOP superfamily Outer membrane phospholipase A (OMPLA)
SCOP superfamily Bcl-2 inhibitors of programmed cell death
SCOP superfamily Colicin
SCOP superfamily Reovirus inner layer core protein p3
SCOP superfamily Prim-pol domain
SCOP superfamily Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
SCOP superfamily Penicillin binding protein dimerisation domain
SCOP superfamily Methionine synthase activation domain-like
SCOP superfamily SRCR-like
SCOP superfamily Nitrile hydratase alpha chain
SCOP superfamily Methenyltetrahydromethanopterin cyclohydrolase
SCOP superfamily beta-lactamase-inhibitor protein, BLIP
SCOP superfamily HPr-like
SCOP superfamily Origin of replication-binding domain, RBD-like
SCOP superfamily Subtilisin inhibitor
SCOP superfamily Cell division protein MinE topological specificity domain
SCOP superfamily Formylmethanofuran:tetrahydromethanopterin formyltransferase
SCOP superfamily Pyrimidine nucleoside phosphorylase C-terminal domain
SCOP superfamily DNA-binding domain of Mlu1-box binding protein MBP1
SCOP superfamily MHC antigen-recognition domain
SCOP superfamily DsbC/DsbG N-terminal domain-like
SCOP superfamily Interleukin 8-like chemokines
SCOP superfamily Prion-like
SCOP superfamily RNase A-like
SCOP superfamily His-Me finger endonucleases
SCOP superfamily Microbial ribonucleases
SCOP superfamily "Helical backbone" metal receptor
SCOP superfamily HybD-like
SCOP superfamily Methylated DNA-protein cysteine methyltransferase domain
SCOP superfamily Nitrogenase accessory factor-like
SCOP superfamily Methylesterase CheB, C-terminal domain
SCOP superfamily Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
SCOP superfamily Bacterial luciferase-like
SCOP superfamily Hedgehog/intein (Hint) domain
SCOP superfamily An insect antifreeze protein
SCOP superfamily Outer surface protein
SCOP superfamily Hemopexin-like domain
SCOP superfamily beta-Barrel protease inhibitors
SCOP superfamily XRCC4, N-terminal domain
SCOP superfamily Herpes virus serine proteinase, assemblin
SCOP superfamily Cytokine
SCOP superfamily CheW-like
SCOP superfamily Myosin S1 fragment, N-terminal domain
SCOP superfamily gp9
SCOP superfamily Baculovirus p35 protein
SCOP superfamily ENV polyprotein, receptor-binding domain
SCOP superfamily PHM/PNGase F
SCOP superfamily Neurophysin II
SCOP superfamily alpha-Amylase inhibitor tendamistat
SCOP superfamily Alpha-macroglobulin receptor domain
SCOP superfamily Carbohydrate-binding domain
SCOP superfamily Invasin/intimin cell-adhesion fragments
SCOP superfamily CBD9-like
SCOP superfamily PKD domain
SCOP superfamily Immunoglobulin
SCOP superfamily Moesin tail domain
SCOP superfamily Fe-only hydrogenase smaller subunit
SCOP superfamily Tetraspanin
SCOP superfamily Tetracyclin repressor-like, C-terminal domain
SCOP superfamily Bacterial muramidases
SCOP superfamily Lipovitellin-phosvitin complex, superhelical domain
SCOP superfamily A virus capsid protein alpha-helical domain
SCOP superfamily Regulator of G-protein signaling, RGS
SCOP superfamily Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
SCOP superfamily DBL homology domain (DH-domain)
SCOP superfamily FliG
SCOP superfamily Apolipophorin-III
SCOP superfamily Hepatitis B viral capsid (hbcag)
SCOP superfamily lambda integrase-like, N-terminal domain
SCOP superfamily Chemotaxis receptor methyltransferase CheR, N-terminal domain
SCOP superfamily STAT
SCOP superfamily Methionine synthase domain
SCOP superfamily Ribbon-helix-helix
SCOP superfamily Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
SCOP superfamily Retrovirus capsid dimerization domain-like
SCOP superfamily 4-helical cytokines
SCOP superfamily alpha-catenin/vinculin-like
SCOP superfamily Hemerythrin-like
SCOP superfamily Cytochromes
SCOP superfamily Aspartate receptor, ligand-binding domain
SCOP superfamily Apolipoprotein
SCOP superfamily Diol dehydratase, gamma subunit
SCOP superfamily RAP domain-like
SCOP superfamily Protozoan pheromone proteins
SCOP superfamily Smac/diablo
SCOP superfamily Spectrin repeat
SCOP superfamily DNA helicase RuvA subunit, C-terminal domain
SCOP superfamily Epsilon subunit of F1F0-ATP synthase C-terminal domain
SCOP superfamily C-terminal UvrC-binding domain of UvrB
SCOP superfamily HR1 repeat
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily Gam-like
SCOP superfamily RILP dimerisation region
SCOP superfamily T-antigen specific domain-like
SCOP superfamily E6 C-terminal domain-like
SCOP superfamily YfgJ-like
SCOP superfamily MgtE membrane domain-like
SCOP superfamily Photosystem II antenna protein-like
SCOP superfamily SNF-like
SCOP superfamily Photosystem II 10 kDa phosphoprotein PsbH
SCOP superfamily Viral glycoprotein ectodomain-like
SCOP superfamily YacF-like
SCOP superfamily PH0156-like
SCOP superfamily Api92-like
SCOP superfamily VPA0735-like
SCOP superfamily FlhC-like
SCOP superfamily Jann2411-like
SCOP superfamily YqaI-like
SCOP superfamily BTG domain-like
SCOP superfamily FLJ32549 C-terminal domain-like
SCOP superfamily BB2672-like
SCOP superfamily PA1123-like
SCOP superfamily BLRF2-like
SCOP superfamily Acetoacetate decarboxylase-like
SCOP superfamily NRDP1 C-terminal domain-like
SCOP superfamily XkdW-like
SCOP superfamily PhnH-like
SCOP superfamily CbiG N-terminal domain-like
SCOP superfamily CobE/GbiG C-terminal domain-like
SCOP superfamily XCC0632-like
SCOP superfamily AttH-like
SCOP superfamily SO1590-like
SCOP superfamily FomD-like
SCOP superfamily Mib/herc2 domain-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily MgtE N-terminal domain-like
SCOP superfamily SMc04008-like
SCOP superfamily MG296-like
SCOP superfamily TerB-like
SCOP superfamily MtlR-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily TAFH domain-like
SCOP superfamily PG0775 C-terminal domain-like
SCOP superfamily DsbB-like
SCOP superfamily HP0062-like
SCOP superfamily SOCS box-like
SCOP superfamily Sec2 N-terminal region
SCOP superfamily MPN010-like
SCOP superfamily Vanabin-like
SCOP superfamily Heme iron utilization protein-like
SCOP superfamily CofE-like
SCOP superfamily GlcG-like
SCOP superfamily ApbE-like
SCOP superfamily GAS2 domain-like
SCOP superfamily FwdE-like
SCOP superfamily TRCF domain-like
SCOP superfamily Prenyltransferase-like
SCOP superfamily TM1622-like
SCOP superfamily Transposase IS200-like
SCOP superfamily YjbR-like
SCOP superfamily ComB-like
SCOP superfamily CinA-like
SCOP superfamily MFPT repeat-like
SCOP superfamily Extracellular hemoglobin linker subunit, receptor domain
SCOP superfamily Atu1913-like
SCOP superfamily Agglutinin HPA-like
SCOP superfamily Hermes dimerisation domain
SCOP superfamily Topoisomerase V catalytic domain-like
SCOP superfamily Duffy binding domain-like
SCOP superfamily PriB N-terminal domain-like
SCOP superfamily TROVE domain-like
SCOP superfamily SipA N-terminal domain-like
SCOP superfamily RUN domain-like
SCOP superfamily PA2201 C-terminal domain-like
SCOP superfamily IpaD-like
SCOP superfamily YfmB-like
SCOP superfamily SP0561-like
SCOP superfamily Type III secretion system domain
SCOP superfamily FlgN-like
SCOP superfamily FHV B2 protein-like
SCOP superfamily PE/PPE dimer-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily YppE-like
SCOP superfamily MxiH-like
SCOP superfamily Calcyclin-binding protein-like
SCOP superfamily Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain
SCOP superfamily Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain
SCOP superfamily Connexin43
SCOP superfamily Viral ssDNA binding protein
SCOP superfamily TM1457-like
SCOP superfamily WWE domain
SCOP superfamily YbjQ-like
SCOP superfamily TM1631-like
SCOP superfamily Hypothetical protein MPN330
SCOP superfamily YugE-like
SCOP superfamily TrmE connector domain
SCOP superfamily DNA methylase specificity domain
SCOP superfamily TrkA C-terminal domain-like
SCOP superfamily Fzo-like conserved region
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily Geminin coiled-coil domain
SCOP superfamily YAP1 redox domain
SCOP superfamily Resistin
SCOP superfamily Hormone receptor domain
SCOP superfamily Pollen allergen ole e 6
SCOP superfamily OmpH-like
SCOP superfamily VP4 membrane interaction domain
SCOP superfamily CbiD-like
SCOP superfamily QueA-like
SCOP superfamily Recombination protein RecR
SCOP superfamily Putative modulator of DNA gyrase, PmbA/TldD
SCOP superfamily Sulfolobus fructose-1,6-bisphosphatase-like
SCOP superfamily YggX-like
SCOP superfamily Dystroglycan, domain 2
SCOP superfamily ThiG-like
SCOP superfamily DNA-binding protein LAG-1 (CSL)
SCOP superfamily BTV NS2-like ssRNA-binding domain
SCOP superfamily DR1885-like metal-binding protein
SCOP superfamily Her-1
SCOP superfamily Hypothetical protein MG354
SCOP superfamily A middle domain of Talin 1
SCOP superfamily NblA-like
SCOP superfamily DinB/YfiT-like putative metalloenzymes
SCOP superfamily CAPPD, an extracellular domain of amyloid beta A4 protein
SCOP superfamily Cag-Z
SCOP superfamily Bacteriocin immunity protein-like
SCOP superfamily Domain from hypothetical 2610208m17rik protein
SCOP superfamily Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
SCOP superfamily PhoU-like
SCOP superfamily Alpha-hemoglobin stabilizing protein AHSP
SCOP superfamily KorB DNA-binding domain-like
SCOP superfamily DnaK suppressor protein DksA, alpha-hairpin domain
SCOP superfamily G protein-binding domain
SCOP superfamily TSP type-3 repeat
SCOP superfamily Plexin repeat
SCOP superfamily Autotransporter
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily PetL subunit of the cytochrome b6f complex
SCOP superfamily 2-methylcitrate dehydratase PrpD
SCOP superfamily MoaD-related protein, C-terminal domain
SCOP superfamily Roadblock/LC7 domain
SCOP superfamily Hypothetical protein Ta1206
SCOP superfamily Chromosomal protein MC1
SCOP superfamily Cell division protein ZapA-like
SCOP superfamily NIF3 (NGG1p interacting factor 3)-like
SCOP superfamily Bacterial fluorinating enzyme, N-terminal domain
SCOP superfamily DNA polymerase III psi subunit
SCOP superfamily Creatininase
SCOP superfamily Adhesin YadA, collagen-binding domain
SCOP superfamily Apyrase
SCOP superfamily Surface presentation of antigens (SPOA)
SCOP superfamily Hydrophobin II, HfbII
SCOP superfamily Hypothetical protein YfhH
SCOP superfamily Smp-1-like
SCOP superfamily Dextranase, N-terminal domain
SCOP superfamily Stathmin
SCOP superfamily Eukaryotic initiation factor 4f subunit eIF4g, eIF4e-binding domain
SCOP superfamily ADP-ribosylglycohydrolase
SCOP superfamily P40 nucleoprotein
SCOP superfamily Hsp90 co-chaperone CDC37
SCOP superfamily YcfC-like
SCOP superfamily YutG-like
SCOP superfamily Methenyltetrahydrofolate cyclohydrolase-like
SCOP superfamily Docking domain A of the erythromycin polyketide synthase (DEBS)
SCOP superfamily Phosphoprotein XD domain
SCOP superfamily B-form DNA mimic Ocr
SCOP superfamily IP3 receptor type 1 binding core, domain 2
SCOP superfamily Kazal-type serine protease inhibitors

Jump to [ Top of page · Assignment statistics ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.