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  Home > Genomes > Superfamily assignments for Linepithema humile v1.1


Linepithema humile v1.1 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Ecdysozoa; Panarthropoda; Arthropoda; Mandibulata; Pancrustacea; Hexapoda; Insecta; Dicondylia; Pterygota; Neoptera; Holometabola; Hymenoptera; Apocrita; Aculeata; Vespoidea; Formicidae; Dolichoderinae; Linepithema; Linepithema humile

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 16177 total
8076 (50 %) with assignment
402 average length
35 % amino acid coverage
Domains: 13585 total
989 unique superfamilies
871 unique families
283 average length
13.7 average superfamily size
93 % formed by duplication
Domain combinations: 1101 domain pairs
3260 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
682 272 81 0 SCOP 57667 beta-beta-alpha zinc fingers
638 518 146 12 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
466 212 79 0 SCOP 48726 Immunoglobulin
266 218 71 16 SCOP 48371 ARM repeat
262 256 88 3 SCOP 56112 Protein kinase-like (PK-like)
229 207 63 1 SCOP 50978 WD40 repeat-like
217 162 55 1 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
198 33 24 0 SCOP 49313 Cadherin-like
188 145 45 1 SCOP 54928 RNA-binding domain, RBD
182 173 43 8 SCOP 51735 NAD(P)-binding Rossmann-fold domains
180 156 32 4 SCOP 46689 Homeodomain-like
175 156 107 9 SCOP 50729 PH domain-like
170 114 48 2 SCOP 48452 TPR-like
162 141 73 4 SCOP 57850 RING/U-box
160 66 51 0 SCOP 57196 EGF/Laminin
150 23 17 1 SCOP 46966 Spectrin repeat
141 128 14 0 SCOP 103473 MFS general substrate transporter
138 134 22 5 SCOP 53098 Ribonuclease H-like
137 67 56 1 SCOP 49265 Fibronectin type III
132 125 16 10 SCOP 53474 alpha/beta-Hydrolases
129 90 48 2 SCOP 52058 L domain-like
122 43 33 0 SCOP 57424 LDL receptor-like module
119 103 40 3 SCOP 47473 EF-hand
119 108 8 1 SCOP 48264 Cytochrome P450
115 101 45 1 SCOP 48403 Ankyrin repeat
113 83 51 1 SCOP 50156 PDZ domain-like
103 99 17 13 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
102 49 26 0 SCOP 57625 Invertebrate chitin-binding proteins
100 67 41 4 SCOP 49899 Concanavalin A-like lectins/glucanases
99 98 7 1 SCOP 81321 Family A G protein-coupled receptor-like
99 55 37 8 SCOP 81296 E set domains
98 90 36 10 SCOP 46785 "Winged helix" DNA-binding domain
97 70 26 6 SCOP 52833 Thioredoxin-like
93 68 58 1 SCOP 50044 SH3-domain
92 81 19 2 SCOP 50494 Trypsin-like serine proteases
92 72 45 1 SCOP 57903 FYVE/PHD zinc finger
89 79 47 4 SCOP 54236 Ubiquitin-like
86 59 37 1 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
80 54 25 0 SCOP 81324 Voltage-gated potassium channels
74 29 18 0 SCOP 49854 Spermadhesin, CUB domain
73 57 33 5 SCOP 50249 Nucleic acid-binding proteins
73 69 33 2 SCOP 54695 POZ domain
68 36 14 5 SCOP 53067 Actin-like ATPase domain
67 25 18 0 SCOP 82895 TSP-1 type 1 repeat
66 62 18 7 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
65 65 29 8 SCOP 54001 Cysteine proteinases
63 53 22 4 SCOP 51905 FAD/NAD(P)-binding domain
60 15 15 0 SCOP 57535 Complement control module/SCR domain
59 50 26 8 SCOP 51445 (Trans)glycosidases
55 26 16 1 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
55 55 10 1 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
54 36 28 1 SCOP 63748 Tudor/PWWP/MBT
53 45 26 1 SCOP 47769 SAM/Pointed domain
49 43 24 6 SCOP 49785 Galactose-binding domain-like
47 28 24 1 SCOP 57184 Growth factor receptor domain
46 41 25 3 SCOP 52799 (Phosphotyrosine protein) phosphatases II
45 44 14 0 SCOP 57756 Retrovirus zinc finger-like domains
44 37 15 2 SCOP 53850 Periplasmic binding protein-like II
44 43 6 0 SCOP 68906 SAP domain
43 43 17 9 SCOP 56784 HAD-like
42 2 2 0 SCOP 90148 DPY module
40 39 10 7 SCOP 53448 Nucleotide-diphospho-sugar transferases
40 38 9 6 SCOP 53383 PLP-dependent transferases
40 38 24 2 SCOP 52047 RNI-like
38 31 10 7 SCOP 51556 Metallo-dependent hydrolases
38 34 16 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
38 36 20 1 SCOP 47576 Calponin-homology domain, CH-domain
38 36 13 1 SCOP 53822 Periplasmic binding protein-like I
38 21 11 1 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
37 36 8 2 SCOP 47113 Histone-fold
37 37 29 2 SCOP 48350 GTPase activation domain, GAP
37 19 13 0 SCOP 100895 Kazal-type serine protease inhibitors
37 25 20 0 SCOP 51045 WW domain
36 36 14 4 SCOP 54495 UBC-like
36 31 27 1 SCOP 55550 SH2 domain
35 33 25 0 SCOP 46934 UBA-like
35 35 14 1 SCOP 52087 CRAL/TRIO domain
35 29 26 0 SCOP 57889 Cysteine-rich domain
34 29 5 2 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
34 32 10 2 SCOP 54373 FAD-linked reductases, C-terminal domain
33 33 4 1 SCOP 103506 Mitochondrial carrier
33 28 8 1 SCOP 56801 Acetyl-CoA synthetase-like
33 24 17 1 SCOP 51206 cAMP-binding domain-like
33 22 16 1 SCOP 53901 Thiolase-like
33 19 11 1 SCOP 90123 ABC transporter transmembrane region
33 21 10 3 SCOP 47954 Cyclin-like
32 31 20 6 SCOP 54211 Ribosomal protein S5 domain 2-like
32 30 11 1 SCOP 47095 HMG-box
31 26 13 4 SCOP 53187 Zn-dependent exopeptidases
31 31 21 1 SCOP 82199 SET domain
31 24 14 3 SCOP 56436 C-type lectin-like
31 20 17 1 SCOP 54768 dsRNA-binding domain-like
31 17 16 0 SCOP 52113 BRCT domain
31 30 5 0 SCOP 63712 Nicotinic receptor ligand binding domain-like
30 25 12 1 SCOP 50129 GroES-like
30 30 14 3 SCOP 56672 DNA/RNA polymerases
30 30 19 1 SCOP 81383 F-box domain
29 20 12 1 SCOP 55073 Nucleotide cyclase
29 29 19 1 SCOP 46565 Chaperone J-domain
29 29 6 1 SCOP 90112 Neurotransmitter-gated ion-channel transmembrane pore
29 29 23 1 SCOP 48065 DBL homology domain (DH-domain)
28 26 16 4 SCOP 56059 Glutathione synthetase ATP-binding domain-like
28 20 17 1 SCOP 47370 Bromodomain
27 27 7 4 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
26 26 17 3 SCOP 103657 BAR/IMD domain-like
26 23 13 1 SCOP 50985 RCC1/BLIP-II
26 26 18 2 SCOP 49879 SMAD/FHA domain
26 25 10 5 SCOP 49417 p53-like transcription factors
25 24 20 3 SCOP 52374 Nucleotidylyl transferase
25 25 20 2 SCOP 55681 Class II aaRS and biotin synthetases
25 21 7 3 SCOP 53254 Phosphoglycerate mutase-like
25 25 11 1 SCOP 51197 Clavaminate synthase-like
25 24 14 2 SCOP 50447 Translation proteins
25 9 6 1 SCOP 63411 LuxS/MPP-like metallohydrolase
24 23 5 1 SCOP 57501 Cystine-knot cytokines
23 22 4 2 SCOP 53649 Alkaline phosphatase-like
23 15 12 0 SCOP 55785 PYP-like sensor domain (PAS domain)
23 21 10 1 SCOP 47616 GST C-terminal domain-like
22 22 9 3 SCOP 56300 Metallo-dependent phosphatases
22 22 15 1 SCOP 64268 PX domain
22 21 10 1 SCOP 81665 Calcium ATPase, transmembrane domain M
22 22 8 0 SCOP 46938 CRAL/TRIO N-terminal domain
22 2 2 0 SCOP 75399 Plakin repeat
21 16 14 1 SCOP 117281 Kelch motif
21 21 13 0 SCOP 144232 HIT/MYND zinc finger-like
21 21 8 1 SCOP 48508 Nuclear receptor ligand-binding domain
21 8 8 0 SCOP 57603 FnI-like domain
20 18 8 1 SCOP 58038 SNARE fusion complex
20 6 6 1 SCOP 55753 Actin depolymerizing proteins
20 20 15 2 SCOP 53300 vWA-like
20 20 6 2 SCOP 56219 DNase I-like
20 19 14 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
20 11 5 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
20 20 5 0 SCOP 48652 Tetraspanin
20 14 11 0 SCOP 90229 CCCH zinc finger
20 18 15 1 SCOP 47031 Second domain of FERM
19 19 4 1 SCOP 50182 Sm-like ribonucleoproteins
19 15 6 1 SCOP 161070 SNF-like
19 5 5 2 SCOP 47220 alpha-catenin/vinculin-like
18 18 5 1 SCOP 50630 Acid proteases
18 15 5 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
18 17 9 1 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
18 13 12 2 SCOP 49599 TRAF domain-like
17 17 5 1 SCOP 49764 HSP20-like chaperones
17 10 8 0 SCOP 56968 Lipovitellin-phosvitin complex; beta-sheet shell regions
17 17 3 0 SCOP 57959 Leucine zipper domain
16 11 6 4 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
16 16 7 4 SCOP 64356 SNARE-like
16 16 7 1 SCOP 50891 Cyclophilin-like
16 11 8 2 SCOP 52777 CoA-dependent acyltransferases
16 16 8 1 SCOP 101898 NHL repeat
16 16 10 0 SCOP 47986 DEATH domain
15 12 5 5 SCOP 100950 NagB/RpiA/CoA transferase-like
15 13 6 3 SCOP 52096 ClpP/crotonase
15 14 5 1 SCOP 51069 Carbonic anhydrase
15 7 6 1 SCOP 49503 Cupredoxins
15 14 2 1 SCOP 52490 Tubulin nucleotide-binding domain-like
15 14 2 1 SCOP 55307 Tubulin C-terminal domain-like
15 15 7 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
15 10 9 0 SCOP 90209 Ran binding protein zinc finger-like
15 11 10 2 SCOP 54160 Chromo domain-like
15 15 10 3 SCOP 48464 ENTH/VHS domain
15 15 11 1 SCOP 56204 Hect, E3 ligase catalytic domain
15 13 3 1 SCOP 100910 Chemosensory protein Csp2
15 15 6 1 SCOP 81653 Calcium ATPase, transduction domain A
14 13 7 1 SCOP 81606 PP2C-like
14 14 13 2 SCOP 52402 Adenine nucleotide alpha hydrolases-like
14 13 6 1 SCOP 53720 ALDH-like
14 11 8 1 SCOP 57997 Tropomyosin
14 13 12 0 SCOP 52151 FabD/lysophospholipase-like
14 13 7 1 SCOP 51011 Glycosyl hydrolase domain
14 14 2 1 SCOP 47565 Insect pheromone/odorant-binding proteins
13 13 6 1 SCOP 55811 Nudix
13 9 9 0 SCOP 81901 HCP-like
13 13 8 3 SCOP 81301 Nucleotidyltransferase
13 10 6 2 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
13 8 6 1 SCOP 54980 EF-G C-terminal domain-like
13 12 10 1 SCOP 48097 Regulator of G-protein signaling, RGS
13 7 7 0 SCOP 57414 Hairpin loop containing domain-like
13 7 7 0 SCOP 69179 Integrin domains
13 8 5 0 SCOP 54556 Chitinase insertion domain
12 11 4 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
12 12 8 2 SCOP 109604 HD-domain/PDEase-like
12 10 6 0 SCOP 54897 Protease propeptides/inhibitors
12 11 5 1 SCOP 48113 Heme-dependent peroxidases
12 12 7 0 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
12 12 9 3 SCOP 55961 Bet v1-like
12 11 5 0 SCOP 144091 Rhomboid-like
12 12 9 0 SCOP 52954 Class II aaRS ABD-related
12 10 8 2 SCOP 53218 Molybdenum cofactor biosynthesis proteins
12 12 10 3 SCOP 88697 PUA domain-like
12 12 6 1 SCOP 82171 DPP6 N-terminal domain-like
12 7 7 1 SCOP 63825 YWTD domain
12 5 4 0 SCOP 90257 Myosin rod fragments
12 6 5 0 SCOP 57362 BPTI-like
11 10 7 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
11 11 5 1 SCOP 50104 Translation proteins SH3-like domain
11 11 5 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
11 11 8 1 SCOP 51695 PLC-like phosphodiesterases
11 11 2 1 SCOP 56655 Carbohydrate phosphatase
11 11 6 1 SCOP 88723 PIN domain-like
11 9 7 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
11 10 6 2 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
11 9 5 1 SCOP 56574 Serpins
11 10 4 1 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
11 11 10 0 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
11 11 4 1 SCOP 52129 Caspase-like
11 11 6 1 SCOP 101912 Sema domain
11 11 8 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
10 9 4 1 SCOP 81338 Aquaporin-like
10 9 5 1 SCOP 54534 FKBP-like
10 10 8 3 SCOP 54427 NTF2-like
10 9 8 1 SCOP 51230 Single hybrid motif
10 9 6 1 SCOP 55797 PR-1-like
10 5 5 1 SCOP 56024 Phospholipase D/nuclease
10 10 4 1 SCOP 50370 Ricin B-like lectins
10 10 5 1 SCOP 47661 t-snare proteins
10 10 3 2 SCOP 52029 GroEL apical domain-like
10 10 5 1 SCOP 81631 PAP/OAS1 substrate-binding domain
10 10 5 1 SCOP 74788 Cullin repeat-like
10 10 9 0 SCOP 57845 B-box zinc-binding domain
10 10 7 0 SCOP 57302 Snake toxin-like
10 10 6 0 SCOP 54277 CAD & PB1 domains
10 9 8 1 SCOP 140741 RUN domain-like
10 6 4 1 SCOP 57924 Inhibitor of apoptosis (IAP) repeat
10 5 5 0 SCOP 56487 SRCR-like
10 2 2 1 SCOP 81698 FF domain
9 9 2 3 SCOP 51569 Aldolase
9 7 5 2 SCOP 53271 PRTase-like
9 9 2 2 SCOP 53613 Ribokinase-like
9 9 8 1 SCOP 55920 Creatinase/aminopeptidase
9 9 6 1 SCOP 55120 Pseudouridine synthase
9 7 5 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
9 9 6 1 SCOP 51395 FMN-linked oxidoreductases
9 9 2 1 SCOP 48576 Terpenoid synthases
9 8 4 2 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
9 5 4 1 SCOP 49329 Cu,Zn superoxide dismutase-like
9 9 8 1 SCOP 88713 Glycoside hydrolase/deacetylase
9 7 4 2 SCOP 47413 lambda repressor-like DNA-binding domains
9 8 7 1 SCOP 57783 Zinc beta-ribbon
9 9 8 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
9 9 6 3 SCOP 52467 DHS-like NAD/FAD-binding domain
9 9 7 2 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
9 9 2 1 SCOP 48592 GroEL equatorial domain-like
9 9 8 1 SCOP 69318 Integrin alpha N-terminal domain
9 9 3 0 SCOP 48619 Phospholipase A2, PLA2
9 7 4 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
9 8 6 2 SCOP 52440 PreATP-grasp domain
9 9 7 2 SCOP 63380 Riboflavin synthase domain-like
9 9 2 1 SCOP 56327 LDH C-terminal domain-like
9 9 9 1 SCOP 48366 Ras GEF
9 3 2 1 SCOP 53738 Phosphoglucomutase, first 3 domains
9 9 6 0 SCOP 111418 Hormone receptor domain
9 9 8 0 SCOP 103575 Plexin repeat
9 5 4 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
9 9 2 0 SCOP 54849 GroEL-intermediate domain like
8 8 7 2 SCOP 52317 Class I glutamine amidotransferase-like
8 7 3 1 SCOP 75304 Amidase signature (AS) enzymes
8 8 2 2 SCOP 47240 Ferritin-like
8 7 4 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
8 8 4 2 SCOP 55315 L30e-like
8 8 3 0 SCOP 46579 Prefoldin
8 8 5 2 SCOP 48208 Six-hairpin glycosidases
8 6 5 2 SCOP 52768 Arginase/deacetylase
8 6 4 1 SCOP 117856 AF0104/ALDC/Ptd012-like
8 6 4 1 SCOP 50814 Lipocalins
8 8 4 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
8 7 6 0 SCOP 81995 beta-sandwich domain of Sec23/24
8 8 4 3 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
8 8 6 1 SCOP 57863 ArfGap/RecO-like zinc finger
8 8 6 0 SCOP 48431 Lipovitellin-phosvitin complex, superhelical domain
8 7 5 1 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
8 7 6 1 SCOP 74924 Cap-Gly domain
8 4 2 1 SCOP 49742 PHM/PNGase F
8 8 6 1 SCOP 111347 Rap/Ran-GAP
8 6 6 1 SCOP 116846 MIT domain
8 3 3 0 SCOP 50911 Mannose 6-phosphate receptor domain
8 6 4 0 SCOP 57567 Serine protease inhibitors
8 3 2 0 SCOP 47862 Saposin
8 7 3 0 SCOP 55666 Ribonuclease PH domain 2-like
8 8 3 0 SCOP 158457 Orange domain-like
7 7 7 1 SCOP 52821 Rhodanese/Cell cycle control phosphatase
7 5 5 1 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
7 7 6 3 SCOP 56104 SAICAR synthase-like
7 7 4 0 SCOP 63829 Calcium-dependent phosphotriesterase
7 7 2 1 SCOP 51430 NAD(P)-linked oxidoreductase
7 7 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
7 7 5 2 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
7 7 6 2 SCOP 74650 Galactose mutarotase-like
7 4 4 0 SCOP 51126 Pectin lyase-like
7 6 5 1 SCOP 54631 CBS-domain pair
7 6 6 2 SCOP 46955 Putative DNA-binding domain
7 4 4 0 SCOP 69065 RNase III domain-like
7 7 7 1 SCOP 52200 Toll/Interleukin receptor TIR domain
7 7 3 2 SCOP 48019 post-AAA+ oligomerization domain-like
7 6 5 1 SCOP 51971 Nucleotide-binding domain
7 3 2 0 SCOP 161093 MgtE membrane domain-like
7 7 4 0 SCOP 52075 Outer arm dynein light chain 1
7 5 5 1 SCOP 56042 PurM C-terminal domain-like
7 5 5 1 SCOP 55326 PurM N-terminal domain-like
7 7 6 1 SCOP 63882 MoeA N-terminal region -like
7 4 3 1 SCOP 55945 TATA-box binding protein-like
7 5 4 1 SCOP 158702 Sec63 N-terminal domain-like
7 7 3 1 SCOP 117892 Band 7/SPFH domain
7 7 6 1 SCOP 46774 ARID-like
7 6 4 1 SCOP 47895 Transducin (alpha subunit), insertion domain
7 5 4 1 SCOP 82109 MIR domain
7 7 5 1 SCOP 101690 PAZ domain
7 5 5 1 SCOP 117839 WWE domain
7 4 4 0 SCOP 57440 Kringle-like
7 5 5 1 SCOP 109905 Surp module (SWAP domain)
7 7 4 1 SCOP 63501 Frizzled cysteine-rich domain
7 7 3 0 SCOP 158235 SOCS box-like
6 6 3 0 SCOP 57829 Zn-binding ribosomal proteins
6 5 3 3 SCOP 54197 HIT-like
6 6 4 1 SCOP 53137 Translational machinery components
6 6 6 0 SCOP 47336 ACP-like
6 6 6 1 SCOP 54292 2Fe-2S ferredoxin-like
6 6 1 1 SCOP 144122 Tim10-like
6 6 1 1 SCOP 56815 Sec1/munc18-like (SM) proteins
6 6 4 1 SCOP 47027 Acyl-CoA binding protein
6 6 3 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
6 3 3 0 SCOP 55008 HMA, heavy metal-associated domain
6 6 5 2 SCOP 55931 Glutamine synthetase/guanido kinase
6 5 5 0 SCOP 161111 Cation efflux protein transmembrane domain-like
6 5 4 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
6 5 3 1 SCOP 118215 Proton glutamate symport protein
6 5 3 1 SCOP 55846 N-acetylmuramoyl-L-alanine amidase-like
6 4 4 0 SCOP 47781 RuvA domain 2-like
6 3 3 0 SCOP 49452 Starch-binding domain-like
6 6 5 1 SCOP 52743 Subtilisin-like
6 4 4 1 SCOP 159034 Mib/herc2 domain-like
6 4 4 0 SCOP 57610 Thyroglobulin type-1 domain
6 6 4 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
6 6 4 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
6 6 5 1 SCOP 82708 R3H domain
6 5 4 1 SCOP 56366 SMAD MH1 domain
6 6 5 1 SCOP 48425 Sec7 domain
6 6 6 0 SCOP 101288 L27 domain
6 6 2 1 SCOP 75632 Cullin homology domain
6 2 2 0 SCOP 103637 CCHHC domain
6 4 3 0 SCOP 110035 GDNF receptor-like
6 6 3 0 SCOP 63877 Methuselah ectodomain
5 5 3 1 SCOP 53927 Cytidine deaminase-like
5 4 3 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
5 5 4 0 SCOP 55174 Alpha-L RNA-binding motif
5 4 4 1 SCOP 75217 alpha/beta knot
5 3 2 0 SCOP 81333 F1F0 ATP synthase subunit C
5 5 3 0 SCOP 51161 Trimeric LpxA-like enzymes
5 5 5 1 SCOP 54862 4Fe-4S ferredoxins
5 5 3 1 SCOP 102114 Radical SAM enzymes
5 4 4 2 SCOP 51419 PLP-binding barrel
5 5 2 2 SCOP 46626 Cytochrome c
5 5 4 1 SCOP 56317 Carbon-nitrogen hydrolase
5 5 2 4 SCOP 51182 RmlC-like cupins
5 5 4 1 SCOP 48439 Protein prenylyltransferase
5 4 3 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
5 3 3 1 SCOP 55781 GAF domain-like
5 5 2 0 SCOP 47072 Cysteine alpha-hairpin motif
5 5 3 0 SCOP 55257 RBP11-like subunits of RNA polymerase
5 5 2 0 SCOP 52091 SpoIIaa-like
5 5 3 0 SCOP 102712 JAB1/MPN domain
5 5 3 1 SCOP 56349 DNA breaking-rejoining enzymes
5 3 3 1 SCOP 82153 FAS1 domain
5 5 4 1 SCOP 103025 Folate-binding domain
5 4 4 0 SCOP 69322 Tricorn protease domain 2
5 5 1 1 SCOP 110395 CutC-like
5 5 4 0 SCOP 63867 MoeA C-terminal domain-like
5 1 1 0 SCOP 50199 Staphylococcal nuclease
5 4 3 1 SCOP 55979 DNA clamp
5 2 2 1 SCOP 50405 Actin-crosslinking proteins
5 5 5 3 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
5 2 2 0 SCOP 49464 Carboxypeptidase regulatory domain-like
5 5 3 1 SCOP 52210 Succinyl-CoA synthetase domains
5 5 2 1 SCOP 48056 Di-copper centre-containing domain
5 5 4 1 SCOP 48225 Seven-hairpin glycosidases
5 3 2 0 SCOP 118310 AN1-like Zinc finger
5 5 4 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
5 5 5 1 SCOP 81837 BEACH domain
5 5 4 3 SCOP 49348 Clathrin adaptor appendage domain
5 5 2 0 SCOP 47391 Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
5 4 4 0 SCOP 57256 Elafin-like
5 4 4 1 SCOP 89837 Doublecortin (DC)
5 5 5 1 SCOP 109993 VPS9 domain
5 5 3 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
5 3 3 1 SCOP 109885 I/LWEQ domain
5 4 4 0 SCOP 46585 HR1 repeat
5 5 2 0 SCOP 57552 Blood coagulation inhibitor (disintegrin)
5 5 2 0 SCOP 48050 Hemocyanin, N-terminal domain
5 5 4 0 SCOP 75553 Smc hinge domain
5 3 3 0 SCOP 82615 Polo-box domain
4 4 3 1 SCOP 53167 Purine and uridine phosphorylases
4 4 3 1 SCOP 52141 Uracil-DNA glycosylase-like
4 4 3 0 SCOP 52080 Ribosomal proteins L15p and L18e
4 4 3 0 SCOP 110324 Ribosomal L27 protein-like
4 4 1 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
4 4 4 1 SCOP 52980 Restriction endonuclease-like
4 3 2 0 SCOP 54060 His-Me finger endonucleases
4 4 3 1 SCOP 144000 Oxysterol-binding protein-like
4 4 4 2 SCOP 47819 HRDC-like
4 4 4 1 SCOP 56399 ADP-ribosylation
4 4 3 1 SCOP 51998 PFL-like glycyl radical enzymes
4 4 4 1 SCOP 50022 ISP domain
4 4 2 1 SCOP 110857 Gamma-glutamyl cyclotransferase-like
4 4 3 1 SCOP 54518 Tubby C-terminal domain-like
4 4 4 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
4 3 3 1 SCOP 50486 FMT C-terminal domain-like
4 4 1 1 SCOP 103196 Roadblock/LC7 domain
4 4 3 2 SCOP 51604 Enolase C-terminal domain-like
4 4 3 1 SCOP 100939 SPOC domain-like
4 4 4 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
4 4 4 0 SCOP 55186 ThrRS/AlaRS common domain
4 4 4 2 SCOP 46548 alpha-helical ferredoxin
4 4 4 0 SCOP 53092 Creatinase/prolidase N-terminal domain
4 4 4 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
4 4 4 1 SCOP 56176 FAD-binding/transporter-associated domain-like
4 4 2 1 SCOP 52922 TK C-terminal domain-like
4 4 4 0 SCOP 48334 DNA repair protein MutS, domain III
4 3 3 1 SCOP 50621 Alanine racemase C-terminal domain-like
4 4 4 0 SCOP 54171 DNA-binding domain
4 4 3 1 SCOP 54826 Enolase N-terminal domain-like
4 4 2 2 SCOP 55060 GHMP Kinase, C-terminal domain
4 4 2 1 SCOP 117289 Nucleoporin domain
4 4 2 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
4 4 2 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
4 4 3 1 SCOP 81271 TGS-like
4 4 4 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
4 4 1 1 SCOP 101152 Mob1/phocein
4 4 2 1 SCOP 50353 Cytokine
4 4 3 0 SCOP 48670 Transducin (heterotrimeric G protein), gamma chain
4 4 3 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
4 3 3 0 SCOP 57262 Leech antihemostatic proteins
4 4 3 0 SCOP 82927 Cysteine-rich DNA binding domain, (DM domain)
4 4 3 0 SCOP 110942 HSP90 C-terminal domain
4 4 4 0 SCOP 140111 Endosomal sorting complex assembly domain
4 4 3 1 SCOP 103243 KA1-like
4 2 1 0 SCOP 49309 Transglutaminase, two C-terminal domains
4 3 3 1 SCOP 49758 Calpain large subunit, middle domain (domain III)
4 3 3 0 SCOP 140383 BSD domain-like
4 4 3 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
3 3 3 0 SCOP 56808 Ribosomal protein L1
3 3 2 0 SCOP 46911 Ribosomal protein S18
3 3 2 2 SCOP 51366 Ribulose-phoshate binding barrel
3 3 1 0 SCOP 54999 Ribosomal protein S10
3 3 3 1 SCOP 52218 Flavoproteins
3 3 3 0 SCOP 160369 Ribosomal protein L10-like
3 3 3 0 SCOP 47060 S15/NS1 RNA-binding domain
3 3 2 3 SCOP 51316 Mss4-like
3 3 1 1 SCOP 48557 L-aspartase-like
3 2 2 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
3 3 2 0 SCOP 82657 BolA-like
3 3 1 1 SCOP 56796 Dehydroquinate synthase-like
3 3 3 2 SCOP 52949 Macro domain-like
3 3 3 1 SCOP 48256 Citrate synthase
3 3 3 0 SCOP 140718 Mediator hinge subcomplex-like
3 3 3 1 SCOP 53328 Formyltransferase
3 3 1 1 SCOP 54648 DLC
3 3 2 1 SCOP 52499 Isochorismatase-like hydrolases
3 3 2 0 SCOP 51306 LexA/Signal peptidase
3 2 2 1 SCOP 69645 Arp2/3 complex subunits
3 3 2 0 SCOP 47694 Cytochrome c oxidase subunit h
3 2 2 1 SCOP 49777 PEBP-like
3 3 3 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
3 3 2 1 SCOP 55159 eIF1-like
3 1 1 0 SCOP 58113 Apolipoprotein A-I
3 3 1 1 SCOP 55418 eIF4e-like
3 2 2 0 SCOP 52788 Phosphotyrosine protein phosphatases I
3 3 3 1 SCOP 55718 SCP-like
3 3 2 2 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
3 3 2 1 SCOP 111352 Ammonium transporter
3 3 2 1 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
3 3 2 1 SCOP 50692 ADC-like
3 3 2 1 SCOP 81340 Clc chloride channel
3 3 3 1 SCOP 50800 PK beta-barrel domain-like
3 2 2 1 SCOP 82544 GckA/TtuD-like
3 3 2 1 SCOP 89796 CoA-transferase family III (CaiB/BaiF)
3 3 3 1 SCOP 52335 Methylglyoxal synthase-like
3 3 1 1 SCOP 55804 Phoshotransferase/anion transport protein
3 3 3 1 SCOP 56534 Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
3 3 1 1 SCOP 89124 Nop domain
3 3 2 1 SCOP 54984 eEF-1beta-like
3 3 2 1 SCOP 102462 Peptidyl-tRNA hydrolase II
3 3 3 1 SCOP 51246 Rudiment single hybrid motif
3 3 3 0 SCOP 69989 C-terminal domain of PLC-beta
3 3 2 0 SCOP 54106 LysM domain
3 2 2 1 SCOP 142877 EndoU-like
3 3 3 0 SCOP 50965 Galactose oxidase, central domain
3 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
3 3 2 1 SCOP 68923 PEP carboxykinase N-terminal domain
3 3 3 1 SCOP 140990 FtsH protease domain-like
3 3 3 0 SCOP 141673 MOSC N-terminal domain-like
3 3 2 0 SCOP 49354 PapD-like
3 1 1 1 SCOP 103647 TSP type-3 repeat
3 3 2 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
3 3 2 1 SCOP 56496 Fibrinogen C-terminal domain-like
3 2 2 0 SCOP 90250 Troponin coil-coiled subunits
3 3 2 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
3 3 2 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
3 3 2 1 SCOP 160696 BTG domain-like
3 3 3 0 SCOP 49410 Alpha-macroglobulin receptor domain
3 2 2 1 SCOP 48445 14-3-3 protein
3 3 2 1 SCOP 47874 Annexin
3 3 3 3 SCOP 158573 GINS helical bundle-like
3 3 3 0 SCOP 82671 SEA domain
3 2 2 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
3 3 2 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
3 3 2 1 SCOP 144074 E2F-DP heterodimerization region
3 3 3 0 SCOP 88688 Families 57/38 glycoside transferase middle domain
3 3 3 0 SCOP 47050 VHP, Villin headpiece domain
3 2 2 0 SCOP 143791 DUSP-like
3 3 3 0 SCOP 101233 PWI domain
3 2 2 0 SCOP 81778 Crustacean CHH/MIH/GIH neurohormone
3 1 1 1 SCOP 47762 PAH2 domain
3 3 2 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
3 3 2 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
3 2 2 1 SCOP 57933 TAZ domain
3 3 2 1 SCOP 48034 Guanido kinase N-terminal domain
3 3 3 0 SCOP 143575 GAS2 domain-like
3 1 1 0 SCOP 47045 RAP domain-like
3 3 3 1 SCOP 63763 SAND domain-like
3 3 3 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
3 3 2 1 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
3 2 2 1 SCOP 100909 IP3 receptor type 1 binding core, domain 2
3 3 2 1 SCOP 54585 Cdc48 domain 2-like
3 3 3 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
3 3 2 2 SCOP 89009 GAT-like domain
3 3 2 1 SCOP 81811 Helical domain of Sec23/24
3 3 3 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
3 3 2 0 SCOP 82919 Zn-finger domain of Sec23/24
2 2 2 1 SCOP 47973 Ribosomal protein S7
2 2 2 2 SCOP 53697 SIS domain
2 2 2 1 SCOP 52166 Ribosomal protein L4
2 2 2 0 SCOP 54843 Ribosomal protein L22
2 2 1 1 SCOP 54686 Ribosomal protein L16p/L10e
2 2 1 1 SCOP 50193 Ribosomal protein L14
2 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
2 1 1 1 SCOP 53784 Phosphofructokinase
2 2 1 1 SCOP 75620 Release factor
2 2 1 0 SCOP 52161 Ribosomal protein L13
2 2 2 1 SCOP 51730 FAD-linked oxidoreductase
2 2 2 1 SCOP 48150 DNA-glycosylase
2 2 1 0 SCOP 89360 HesB-like domain
2 2 1 1 SCOP 51713 tRNA-guanine transglycosylase
2 2 1 1 SCOP 56276 S-adenosylmethionine decarboxylase
2 2 2 1 SCOP 52313 Ribosomal protein S2
2 2 2 1 SCOP 64005 Undecaprenyl diphosphate synthase
2 2 1 0 SCOP 54285 MoaD/ThiS
2 2 2 1 SCOP 55205 EPT/RTPC-like
2 1 1 0 SCOP 55298 YjgF-like
2 2 1 0 SCOP 55129 Ribosomal protein L30p/L7e
2 2 2 1 SCOP 50475 FMN-binding split barrel
2 2 1 1 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
2 2 1 1 SCOP 53590 Nucleoside hydrolase
2 2 1 1 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
2 2 1 1 SCOP 81411 Mitochondrial cytochrome c oxidase subunit VIa
2 2 2 0 SCOP 63393 RNA polymerase subunits
2 2 1 0 SCOP 81514 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
2 2 1 2 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
2 2 1 1 SCOP 56019 The spindle assembly checkpoint protein mad2
2 2 2 0 SCOP 53639 AraD/HMP-PK domain-like
2 2 1 2 SCOP 52972 ITPase-like
2 1 1 1 SCOP 118203 Vacuolar ATP synthase subunit C
2 1 1 0 SCOP 82282 Homocysteine S-methyltransferase
2 2 2 1 SCOP 56529 FAH
2 2 2 1 SCOP 64153 YjeF N-terminal domain-like
2 2 2 1 SCOP 143113 NAP-like
2 1 1 0 SCOP 52266 SGNH hydrolase
2 2 1 0 SCOP 143447 AMMECR1-like
2 2 1 1 SCOP 55909 Pentein
2 2 1 1 SCOP 81442 Cytochrome c oxidase subunit I-like
2 2 1 2 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
2 2 1 0 SCOP 46458 Globin-like
2 2 1 1 SCOP 161084 MAPEG domain-like
2 2 2 0 SCOP 69118 AhpD-like
2 2 1 1 SCOP 53795 PEP carboxykinase-like
2 2 2 0 SCOP 141571 Pentapeptide repeat-like
2 1 1 0 SCOP 54909 Dimeric alpha+beta barrel
2 1 1 1 SCOP 118196 YaeB-like
2 2 2 1 SCOP 52016 LeuD/IlvD-like
2 2 2 0 SCOP 82771 GIY-YIG endonuclease
2 2 2 0 SCOP 82697 PurS-like
2 2 2 1 SCOP 55166 Hedgehog/DD-peptidase
2 2 2 0 SCOP 55154 CYTH-like phosphatases
2 2 2 0 SCOP 54736 ClpS-like
2 2 1 0 SCOP 50242 TIMP-like
2 2 2 1 SCOP 53732 Aconitase iron-sulfur domain
2 2 1 0 SCOP 54975 Acylphosphatase/BLUF domain-like
2 1 1 1 SCOP 110581 Indigoidine synthase A-like
2 2 2 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
2 2 2 0 SCOP 55021 ACT-like
2 2 2 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
2 2 2 1 SCOP 47592 SWIB/MDM2 domain
2 2 2 0 SCOP 82704 AlbA-like
2 2 1 1 SCOP 74784 Translin
2 2 2 1 SCOP 111321 AF1104-like
2 2 2 0 SCOP 160350 Rnp2-like
2 2 2 0 SCOP 143437 THUMP domain-like
2 2 2 1 SCOP 56003 Molybdenum cofactor-binding domain
2 2 2 0 SCOP 46589 tRNA-binding arm
2 2 2 0 SCOP 158832 Tex N-terminal region-like
2 2 1 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
2 1 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
2 2 2 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
2 2 2 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
2 1 1 0 SCOP 54403 Cystatin/monellin
2 2 2 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
2 2 2 1 SCOP 56719 Type II DNA topoisomerase
2 2 2 0 SCOP 160481 BRK domain-like
2 2 2 0 SCOP 118116 DNA mismatch repair protein MutL
2 2 1 0 SCOP 81336 F1F0 ATP synthase subunit A
2 2 2 0 SCOP 55658 L9 N-domain-like
2 2 1 0 SCOP 158745 LanC-like
2 2 2 0 SCOP 160059 PriA/YqbF domain
2 2 2 1 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
2 2 2 0 SCOP 49842 TNF-like
2 2 2 0 SCOP 47090 PGBD-like
2 2 2 1 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
2 1 1 0 SCOP 54810 GMP synthetase C-terminal dimerisation domain
2 1 1 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
2 1 1 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
2 2 2 1 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
2 2 2 1 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
2 1 1 0 SCOP 49299 PKD domain
2 2 2 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
2 2 2 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
2 2 1 1 SCOP 55637 Cell cycle regulatory proteins
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 2 2 1 SCOP 47741 CO dehydrogenase ISP C-domain like
2 2 2 1 SCOP 50923 Hemopexin-like domain
2 1 1 1 SCOP 141072 CalX-like
2 2 2 0 SCOP 56994 Insulin-like
2 2 2 1 SCOP 69000 FAD-dependent thiol oxidase
2 2 2 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
2 2 2 0 SCOP 55394 Bactericidal permeability-increasing protein, BPI
2 2 2 1 SCOP 63570 PABC (PABP) domain
2 2 2 1 SCOP 50723 Core binding factor beta, CBF
2 2 2 1 SCOP 55455 SRF-like
2 2 1 0 SCOP 110004 Glycolipid transfer protein, GLTP
2 2 2 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
2 2 2 1 SCOP 69012 alpha-ketoacid dehydrogenase kinase, N-terminal domain
2 2 1 0 SCOP 143724 PHP14-like
2 2 2 0 SCOP 52025 PA domain
2 2 2 1 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
2 2 1 1 SCOP 116907 Hook domain
2 2 2 0 SCOP 63451 LEM domain
2 2 2 0 SCOP 103107 Hypothetical protein c14orf129, hspc210
2 2 2 0 SCOP 64602 F1 ATPase inhibitor, IF1, C-terminal domain
2 1 1 0 SCOP 57586 TNF receptor-like
2 2 2 0 SCOP 47454 A DNA-binding domain in eukaryotic transcription factors
2 1 1 0 SCOP 64593 Intermediate filament protein, coiled coil region
2 2 2 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
2 2 2 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
2 2 2 1 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
2 2 2 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
2 2 2 0 SCOP 109715 DEK C-terminal domain
2 2 2 1 SCOP 50916 Rap30/74 interaction domains
2 2 2 0 SCOP 46942 Elongation factor TFIIS domain 2
2 2 2 1 SCOP 48678 Moesin tail domain
2 2 2 0 SCOP 143503 PUG domain-like
2 2 2 0 SCOP 69687 Integrin beta tail domain
2 2 2 0 SCOP 55277 GYF domain
2 2 2 1 SCOP 158553 TAFH domain-like
2 2 2 1 SCOP 63887 P-domain of calnexin/calreticulin
2 2 2 1 SCOP 160897 Taf5 N-terminal domain-like
2 2 1 0 SCOP 64586 C-terminal domain of ProRS
2 2 2 0 SCOP 144270 Eferin C-derminal domain-like
2 1 1 0 SCOP 90193 Notch domain
2 2 1 0 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
2 2 2 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
2 2 2 0 SCOP 53150 DNA repair protein MutS, domain II
2 2 2 1 SCOP 47802 DNA polymerase beta, N-terminal domain-like
2 2 2 0 SCOP 158230 PRP4-like
1 1 1 1 SCOP 53790 Tetrapyrrole methylase
1 1 1 0 SCOP 56420 Peptide deformylase
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 0 SCOP 54570 Ribosomal protein S19
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 0 SCOP 46946 S13-like H2TH domain
1 1 1 0 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 0 SCOP 64182 DHH phosphoesterases
1 1 1 0 SCOP 143034 L35p-like
1 1 1 0 SCOP 74731 Ribosomal protein L20
1 1 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 1 SCOP 53597 Dihydrofolate reductase-like
1 1 1 0 SCOP 141091 L21p-like
1 1 1 1 SCOP 51658 Xylose isomerase-like
1 1 1 0 SCOP 143800 L28p-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 82549 DAK1/DegV-like
1 1 1 0 SCOP 75625 YebC-like
1 1 1 1 SCOP 82649 SufE/NifU
1 1 1 1 SCOP 50324 Inorganic pyrophosphatase
1 1 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 0 SCOP 53633 Carbamate kinase-like
1 1 1 0 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 55821 YrdC/RibB
1 1 1 0 SCOP 50715 Ribosomal protein L25-like
1 1 1 1 SCOP 56770 HydA/Nqo6-like
1 1 1 1 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
1 1 1 0 SCOP 101908 Putative isomerase YbhE
1 1 1 1 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
1 1 1 0 SCOP 81452 Cytochrome c oxidase subunit III-like
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 1 SCOP 55387 Frataxin/Nqo15-like
1 1 1 0 SCOP 48140 Ribosomal protein L19 (L19e)
1 1 1 0 SCOP 144217 CSL zinc finger
1 1 1 0 SCOP 52042 Ribosomal protein L32e
1 1 1 0 SCOP 55469 FMN-dependent nitroreductase-like
1 1 1 0 SCOP 48613 Heme oxygenase-like
1 1 1 0 SCOP 141678 MAL13P1.257-like
1 1 1 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
1 1 1 0 SCOP 54575 Ribosomal protein L31e
1 1 1 0 SCOP 69500 DTD-like
1 1 1 1 SCOP 102886 Coproporphyrinogen III oxidase
1 1 1 1 SCOP 51726 UROD/MetE-like
1 1 1 0 SCOP 142897 TFB5-like
1 1 1 0 SCOP 103456 Preprotein translocase SecE subunit
1 1 1 1 SCOP 56634 Heme-dependent catalase-like
1 1 1 1 SCOP 57798 Casein kinase II beta subunit
1 1 1 0 SCOP 81406 Mitochondrial cytochrome c oxidase subunit IV
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 1 SCOP 55248 PCD-like
1 1 1 0 SCOP 89895 FYSH domain
1 1 1 1 SCOP 53774 Glutaminase/Asparaginase
1 1 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
1 1 1 1 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
1 1 1 0 SCOP 81508 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 48662 Ribosomal protein L39e
1 1 1 0 SCOP 140959 Indolic compounds 2,3-dioxygenase-like
1 1 1 0 SCOP 161219 CHY zinc finger-like
1 1 1 1 SCOP 110849 ParB/Sulfiredoxin
1 1 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
1 1 1 1 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
1 1 1 0 SCOP 81427 Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 0 SCOP 143870 PF0523-like
1 1 1 0 SCOP 53056 beta-carbonic anhydrase, cab
1 1 1 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
1 1 1 1 SCOP 46924 RNA polymerase subunit RPB10
1 1 1 1 SCOP 46988 Tubulin chaperone cofactor A
1 1 1 1 SCOP 69618 HemD-like
1 1 1 0 SCOP 48690 Epsilon subunit of mitochondrial F1F0-ATP synthase
1 1 1 1 SCOP 63562 RPB6/omega subunit-like
1 1 1 1 SCOP 53800 Chelatase
1 1 1 0 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 81558 Photosystem I subunits PsaA/PsaB
1 1 1 1 SCOP 101546 ASF1-like
1 1 1 0 SCOP 101478 ADP-ribosylglycohydrolase
1 1 1 0 SCOP 111038 YjbQ-like
1 1 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 1 0 SCOP 143243 Nqo5-like
1 1 1 1 SCOP 56601 beta-lactamase/transpeptidase-like
1 1 1 0 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
1 1 1 0 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
1 1 1 0 SCOP 101744 Rof/RNase P subunit-like
1 1 1 0 SCOP 54447 ssDNA-binding transcriptional regulator domain
1 1 1 0 SCOP 89550 PHP domain-like
1 1 1 1 SCOP 89733 L-sulfolactate dehydrogenase-like
1 1 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 1 0 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 1 SCOP 54913 GlnB-like
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 1 SCOP 56762 HydB/Nqo4-like
1 1 1 0 SCOP 53955 Lysozyme-like
1 1 1 1 SCOP 103365 Hypothetical protein PH1602
1 1 1 1 SCOP 50993 Peptidase/esterase 'gauge' domain
1 1 1 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 143081 BB1717-like
1 1 1 0 SCOP 158997 Trm112p-like
1 1 1 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
1 1 1 0 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
1 1 1 0 SCOP 89028 Cobalamin adenosyltransferase-like
1 1 1 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
1 1 1 0 SCOP 89095 GatB/YqeY motif
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 0 SCOP 49472 Transthyretin (synonym: prealbumin)
1 1 1 1 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
1 1 1 0 SCOP 102588 LmbE-like
1 1 1 0 SCOP 160909 ATP12-like
1 1 1 0 SCOP 110069 ApaG-like
1 1 1 0 SCOP 56747 Prim-pol domain
1 1 1 0 SCOP 140931 Fic-like
1 1 1 0 SCOP 57802 Rubredoxin-like
1 1 1 0 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
1 1 1 0 SCOP 101473 DhaL-like
1 1 1 0 SCOP 69786 YggU-like
1 1 1 0 SCOP 64076 MTH938-like
1 1 1 1 SCOP 56726 DNA topoisomerase IV, alpha subunit
1 1 1 1 SCOP 46950 Double-stranded DNA-binding domain
1 1 1 1 SCOP 50346 PRC-barrel domain
1 1 1 0 SCOP 69819 MTH1598-like
1 1 1 1 SCOP 55287 RPB5-like RNA polymerase subunit
1 1 1 0 SCOP 116820 Rps17e-like
1 1 1 0 SCOP 160374 RplX-like
1 1 1 1 SCOP 69695 SRP19
1 1 1 1 SCOP 55895 Ribonuclease Rh-like
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
1 1 1 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
1 1 1 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
1 1 1 1 SCOP 56512 Nitric oxide (NO) synthase oxygenase domain
1 1 1 0 SCOP 58042 Outer membrane lipoprotein
1 1 1 1 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 141255 YccV-like
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 49344 CBD9-like
1 1 1 0 SCOP 58026 Delta-sleep-inducing peptide immunoreactive peptide
1 1 1 1 SCOP 142921 WGR domain-like
1 1 1 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 49468 VHL
1 1 1 1 SCOP 52935 PK C-terminal domain-like
1 1 1 0 SCOP 52009 Phosphohistidine domain
1 1 1 1 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 144206 NOB1 zinc finger-like
1 1 1 1 SCOP 103359 Suppressor of Fused, N-terminal domain
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
1 1 1 0 SCOP 56037 PheT/TilS domain
1 1 1 0 SCOP 75704 Mitotic arrest deficient-like 1, Mad1
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
1 1 1 0 SCOP 58022 XRCC4, C-terminal oligomerization domain
1 1 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
1 1 1 0 SCOP 142984 Nqo1 middle domain-like
1 1 1 0 SCOP 51294 Hedgehog/intein (Hint) domain
1 1 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 110111 Ctag/Cox11
1 1 1 0 SCOP 74853 Lamin A/C globular tail domain
1 1 1 0 SCOP 81585 PsbU/PolX domain-like
1 1 1 1 SCOP 110019 ERO1-like
1 1 1 0 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 0 SCOP 49363 Purple acid phosphatase, N-terminal domain
1 1 1 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
1 1 1 1 SCOP 81891 Poly A polymerase C-terminal region-like
1 1 1 1 SCOP 53920 Fe-only hydrogenase
1 1 1 0 SCOP 143548 Serine metabolism enzymes domain
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
1 1 1 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
1 1 1 0 SCOP 110836 Hypothetical protein SAV1430
1 1 1 1 SCOP 101887 Apyrase
1 1 1 1 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
1 1 1 0 SCOP 47794 Rad51 N-terminal domain-like
1 1 1 0 SCOP 53155 Methylated DNA-protein cysteine methyltransferase domain
1 1 1 0 SCOP 47857 Apolipophorin-III
1 1 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
1 1 1 0 SCOP 56849 delta-Endotoxin (insectocide), N-terminal domain
1 1 1 0 SCOP 101494 Stathmin
1 1 1 0 SCOP 47933 ERP29 C domain-like
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 140490 Nqo1C-terminal domain-like
1 1 1 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
1 1 1 0 SCOP 48092 Transcription factor STAT-4 N-domain
1 1 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
1 1 1 0 SCOP 144284 Sec2 N-terminal region
1 1 1 1 SCOP 47446 Signal peptide-binding domain
1 1 1 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 1 SCOP 116742 eIF2alpha middle domain-like
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 0 SCOP 46596 Eukaryotic DNA topoisomerase I, dispensable insert domain
1 1 1 0 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 0 SCOP 111357 Mitochondrial ATP synthase coupling factor 6
1 1 1 0 SCOP 69203 Nucleoplasmin-like core domain
1 1 1 0 SCOP 49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
1 1 1 1 SCOP 89817 Mago nashi protein
1 1 1 0 SCOP 56854 Bcl-2 inhibitors of programmed cell death
1 1 1 0 SCOP 81518 Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 1 SCOP 47798 Barrier-to-autointegration factor, BAF
1 1 1 0 SCOP 81415 Mitochondrial cytochrome c oxidase subunit VIc
1 1 1 0 SCOP 118359 Expressed protein At2g23090/F21P24.15
1 1 1 0 SCOP 57288 Midkine
1 1 1 0 SCOP 47938 Functional domain of the splicing factor Prp18
1 1 1 1 SCOP 140984 PTPA-like
1 1 1 1 SCOP 158639 ENT-like
1 1 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
1 1 1 0 SCOP 81601 Protein serine/threonine phosphatase 2C, C-terminal domain
1 1 1 0 SCOP 50084 Myosin S1 fragment, N-terminal domain
1 1 1 0 SCOP 111006 Dystroglycan, domain 2
1 1 1 1 SCOP 161065 ATP synthase D chain-like
1 1 1 1 SCOP 47668 N-terminal domain of cbl (N-cbl)
1 1 1 1 SCOP 140102 ISY1 domain-like
1 1 1 0 SCOP 81531 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 48340 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
1 1 1 0 SCOP 140106 Calcyclin-binding protein-like
1 1 1 1 SCOP 140864 TROVE domain-like
1 1 1 1 SCOP 47216 Proteasome activator
1 1 1 1 SCOP 143875 ERH-like
1 1 1 0 SCOP 140856 USP8 N-terminal domain-like
1 1 1 0 SCOP 140361 MIT domain-like
1 1 1 0 SCOP 63491 BAG domain
1 1 1 1 SCOP 48479 Cytochrome c oxidase subunit E
1 1 1 0 SCOP 90188 Somatomedin B domain
1 1 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
1 1 1 0 SCOP 54368 Glutamine synthetase, N-terminal domain
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 1 SCOP 109925 Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
1 1 1 0 SCOP 57059 omega toxin-like
1 1 1 0 SCOP 57095 Scorpion toxin-like
1 1 1 0 SCOP 88645 ssDNA viruses
1 1 1 1 SCOP 54529 Mitochondrial glycoprotein MAM33-like
1 1 1 1 SCOP 49606 Neurophysin II
1 1 1 0 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
1 1 1 1 SCOP 54511 GFP-like
1 1 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
1 1 1 0 SCOP 57546 Crisp domain-like
1 1 1 0 SCOP 161060 ATP synthase B chain-like
1 1 1 0 SCOP 144292 occludin/ELL-like
1 1 1 1 SCOP 110993 eIF-2-alpha, C-terminal domain
1 1 1 1 SCOP 47040 Kix domain of CBP (creb binding protein)
1 1 1 1 SCOP 89942 eEF1-gamma domain
1 1 1 1 SCOP 143885 RGC domain-like
1 1 1 0 SCOP 47912 Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
1 1 1 0 SCOP 160527 V-type ATPase subunit E-like
1 1 1 1 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
1 1 1 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
1 1 1 1 SCOP 47157 Mitochondrial import receptor subunit Tom20
1 1 1 1 SCOP 50989 Clathrin heavy-chain terminal domain
1 1 1 0 SCOP 81822 RuBisCo LSMT C-terminal, substrate-binding domain
1 1 1 1 SCOP 101391 Hsp90 co-chaperone CDC37
1 1 1 1 SCOP 47212 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
1 1 1 1 SCOP 90073 GCM domain
1 1 1 1 SCOP 81382 Skp1 dimerisation domain-like
1 1 1 0 SCOP 118370 Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain
1 1 1 0 SCOP 140427 VPS28 C-terminal domain-like
1 1 1 0 SCOP 69099 Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain
1 1 1 1 SCOP 81872 BRCA2 helical domain
1 1 1 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
1 1 1 1 SCOP 110217 DNA-binding protein LAG-1 (CSL)
1 1 1 0 SCOP 101931 Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain
1 1 1 1 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
1 1 1 0 SCOP 89000 post-HMGL domain-like
1 1 1 0 SCOP 89811 Amyloid beta a4 protein copper binding domain (domain 2)
1 1 1 1 SCOP 159042 Plus3-like
1 1 1 1 SCOP 88802 Pre-PUA domain
1 1 1 0 SCOP 47655 STAT
1 1 1 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
1 1 1 0 SCOP 140996 Hermes dimerisation domain
1 1 1 1 SCOP 68993 FAT domain of focal adhesion kinase
1 1 1 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
1 1 1 1 SCOP 81327 Small-conductance potassium channel
1 1 1 1 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
1 1 1 0 SCOP 161245 Zinc hairpin stack
1 1 1 0 SCOP 140612 EB1 dimerisation domain-like
1 1 1 0 SCOP 102860 mRNA decapping enzyme DcpS N-terminal domain
1 1 1 0 SCOP 116878 TrmE connector domain
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 160651 FLJ32549 C-terminal domain-like
1 1 1 0 SCOP 56491 A heparin-binding domain
1 1 1 1 SCOP 160219 AMPKBI-like
1 1 1 1 SCOP 109843 CAPPD, an extracellular domain of amyloid beta A4 protein
1 1 1 0 SCOP 140586 Dcp2 domain-like
1 1 1 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
1 1 1 0 SCOP 81502 ISP transmembrane anchor
1 1 1 0 SCOP 111479 Fzo-like conserved region
1 1 1 1 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 1 SCOP 101224 HAND domain of the nucleosome remodeling ATPase ISWI
1 1 1 0 SCOP 161256 RILP dimerisation region
1 1 1 1 SCOP 160088 NRDP1 C-terminal domain-like
1 1 1 0 SCOP 109732 HBS1-like domain
1 1 1 0 SCOP 47055 TAF(II)230 TBP-binding fragment
1 1 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
1 1 1 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
1 1 1 0 SCOP 109736 FGAM synthase PurL, linker domain
1 1 1 1 SCOP 47587 Domain of poly(ADP-ribose) polymerase
1 1 1 0 SCOP 101238 XPC-binding domain
1 1 1 0 SCOP 140125 Rabenosyn-5 Rab-binding domain-like
1 1 1 0 SCOP 69125 Nuclear receptor coactivator interlocking domain
1 1 1 0 SCOP 90234 Zinc finger domain of DNA polymerase-alpha
1 1 1 0 SCOP 109805 Phenylalanine zipper
1 1 1 0 SCOP 101283 GRIP domain
1 1 1 0 SCOP 103652 G protein-binding domain
1 1 1 1 SCOP 109880 A middle domain of Talin 1
1 1 1 0 SCOP 111469 Geminin coiled-coil domain
1 1 1 1 SCOP 140482 MAST3 pre-PK domain-like
1 1 1 0 SCOP 140576 HIV integrase-binding domain
1 1 1 1 SCOP 158548 FLJ32549 domain-like

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The following superfamilies have one or more weak hits:

SCOP superfamily Head morphogenesis protein gp7
SCOP superfamily MTH1187/YkoF-like
SCOP superfamily Hypothetical protein VC0424
SCOP superfamily DNA-binding protein Tfx
SCOP superfamily RraA-like
SCOP superfamily Prokaryotic lipoproteins and lipoprotein localization factors
SCOP superfamily Gametocyte protein Pfg27
SCOP superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily Mechanosensitive channel protein MscS (YggB), C-terminal domain
SCOP superfamily Nuclease A inhibitor (NuiA)
SCOP superfamily BAH domain
SCOP superfamily Orange carotenoid protein, N-terminal domain
SCOP superfamily Helical scaffold and wing domains of SecA
SCOP superfamily BRCA2 tower domain
SCOP superfamily C-terminal domain of DFF45/ICAD (DFF-C domain)
SCOP superfamily beta-catenin-interacting protein ICAT
SCOP superfamily Nucleotidyltransferase substrate binding subunit/domain
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Photosystem I reaction center subunit XI, PsaL
SCOP superfamily Bacterial aa3 type cytochrome c oxidase subunit IV
SCOP superfamily Cytochrome c oxidase subunit II-like, transmembrane region
SCOP superfamily ABC transporter involved in vitamin B12 uptake, BtuC
SCOP superfamily Transmembrane di-heme cytochromes
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
SCOP superfamily Arabinanase/levansucrase/invertase
SCOP superfamily Major surface antigen p30, SAG1
SCOP superfamily Eea1 homodimerisation domain
SCOP superfamily Thymidylate synthase-complementing protein Thy1
SCOP superfamily Transcription factor NusA, N-terminal domain
SCOP superfamily Cloacin translocation domain
SCOP superfamily Phage fibre proteins
SCOP superfamily Urease metallochaperone UreE, N-terminal domain
SCOP superfamily Phage tail proteins
SCOP superfamily Bcr-Abl oncoprotein oligomerization domain
SCOP superfamily RecG, N-terminal domain
SCOP superfamily Protein-L-isoaspartyl O-methyltransferase, C-terminal domain
SCOP superfamily Phase 1 flagellin
SCOP superfamily CNF1/YfiH-like putative cysteine hydrolases
SCOP superfamily 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
SCOP superfamily Ribonuclease domain of colicin E3
SCOP superfamily PTS-regulatory domain, PRD
SCOP superfamily MurE/MurF N-terminal domain
SCOP superfamily Oligomerization domain of hepatitis delta antigen
SCOP superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain
SCOP superfamily Bacterial hemolysins
SCOP superfamily Virus ectodomain
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily N-terminal coiled coil domain from apc
SCOP superfamily Multimerization domain of the phosphoprotein from sendai virus
SCOP superfamily Coiled-coil dimerization domain from cortexillin I
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Assembly domain of cartilage oligomeric matrix protein
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
SCOP superfamily Carboxypeptidase inhibitor
SCOP superfamily TB module/8-cys domain
SCOP superfamily Trefoil
SCOP superfamily Neurotoxin III (ATX III)
SCOP superfamily Agouti-related protein
SCOP superfamily Anthrax protective antigen
SCOP superfamily Viral glycoprotein, central and dimerisation domains
SCOP superfamily Perfringolysin
SCOP superfamily Aerolisin/ETX pore-forming domain
SCOP superfamily Leukocidin-like
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily Colicin
SCOP superfamily Prismane protein-like
SCOP superfamily Replication terminator protein (Tus)
SCOP superfamily Methionine synthase activation domain-like
SCOP superfamily gp120 core
SCOP superfamily ADC synthase
SCOP superfamily Pyruvoyl-dependent histidine and arginine decarboxylases
SCOP superfamily Monooxygenase (hydroxylase) regulatory protein
SCOP superfamily CytB endotoxin-like
SCOP superfamily Homing endonucleases
SCOP superfamily HPr-like
SCOP superfamily Tautomerase/MIF
SCOP superfamily tRNA-intron endonuclease N-terminal domain-like
SCOP superfamily Cell division protein MinE topological specificity domain
SCOP superfamily LigT-like
SCOP superfamily Nitrite/Sulfite reductase N-terminal domain-like
SCOP superfamily Killer toxin KP6 alpha-subunit
SCOP superfamily Pyrimidine nucleoside phosphorylase C-terminal domain
SCOP superfamily DNA-binding domain of Mlu1-box binding protein MBP1
SCOP superfamily Translation initiation factor IF3, N-terminal domain
SCOP superfamily Staphylokinase/streptokinase
SCOP superfamily Interleukin 8-like chemokines
SCOP superfamily RNase A-like
SCOP superfamily Microbial ribonucleases
SCOP superfamily LigB-like
SCOP superfamily B12-dependent dehydatase associated subunit
SCOP superfamily Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
SCOP superfamily PTS IIb component
SCOP superfamily CheY-like
SCOP superfamily Bacterial luciferase-like
SCOP superfamily Thiamin phosphate synthase
SCOP superfamily delta-Endotoxin (insectocide), middle domain
SCOP superfamily TolB, C-terminal domain
SCOP superfamily Thermostable phytase (3-phytase)
SCOP superfamily Soluble quinoprotein glucose dehydrogenase
SCOP superfamily Avidin/streptavidin
SCOP superfamily Barwin-like endoglucanases
SCOP superfamily STI-like
SCOP superfamily Agglutinin
SCOP superfamily Electron transport accessory proteins
SCOP superfamily Virus attachment protein globular domain
SCOP superfamily Viral protein domain
SCOP superfamily Ecotin, trypsin inhibitor
SCOP superfamily Group II dsDNA viruses VP
SCOP superfamily gamma-Crystallin-like
SCOP superfamily alpha-Amylase inhibitor tendamistat
SCOP superfamily Aromatic compound dioxygenase
SCOP superfamily Cna protein B-type domain
SCOP superfamily Bacterial adhesins
SCOP superfamily Carbohydrate-binding domain
SCOP superfamily Multiheme cytochromes
SCOP superfamily Fe-only hydrogenase smaller subunit
SCOP superfamily Chorismate mutase II
SCOP superfamily Serum albumin-like
SCOP superfamily Tetracyclin repressor-like, C-terminal domain
SCOP superfamily Lipoxigenase
SCOP superfamily A virus capsid protein alpha-helical domain
SCOP superfamily Class II MHC-associated invariant chain ectoplasmic trimerization domain
SCOP superfamily TrpR-like
SCOP superfamily Chondroitin AC/alginate lyase
SCOP superfamily Hepatitis B viral capsid (hbcag)
SCOP superfamily Retroviral matrix proteins
SCOP superfamily lambda integrase-like, N-terminal domain
SCOP superfamily C-terminal domain of RNA polymerase alpha subunit
SCOP superfamily Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
SCOP superfamily Transferrin receptor-like dimerisation domain
SCOP superfamily Cloroperoxidase
SCOP superfamily Retrovirus capsid dimerization domain-like
SCOP superfamily Apolipoprotein
SCOP superfamily T4 endonuclease V
SCOP superfamily Protozoan pheromone proteins
SCOP superfamily Ribosomal protein S20
SCOP superfamily Smac/diablo
SCOP superfamily N-terminal Zn binding domain of HIV integrase
SCOP superfamily C-terminal effector domain of the bipartite response regulators
SCOP superfamily Epsilon subunit of F1F0-ATP synthase C-terminal domain
SCOP superfamily C-terminal UvrC-binding domain of UvrB
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily Gam-like
SCOP superfamily T-antigen specific domain-like
SCOP superfamily MetI-like
SCOP superfamily Photosystem II reaction center protein K, PsbK
SCOP superfamily Photosystem II 10 kDa phosphoprotein PsbH
SCOP superfamily SSO1389-like
SCOP superfamily AF1531-like
SCOP superfamily Poly(A) polymerase catalytic subunit-like
SCOP superfamily PG1388-like
SCOP superfamily Jann2411-like
SCOP superfamily Phosphoprotein oligomerization domain-like
SCOP superfamily YehR-like
SCOP superfamily SMI1/KNR4-like
SCOP superfamily Ava3019-like
SCOP superfamily BLRF2-like
SCOP superfamily BH3703-like
SCOP superfamily NMB0488-like
SCOP superfamily NSP3A-like
SCOP superfamily Dhaf3308-like
SCOP superfamily CbiG N-terminal domain-like
SCOP superfamily YkvR-like
SCOP superfamily BC4932-like
SCOP superfamily YopX-like
SCOP superfamily Smr-associated domain-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily MgtE N-terminal domain-like
SCOP superfamily SMc04008-like
SCOP superfamily MG296-like
SCOP superfamily Sama2622-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily RbcX-like
SCOP superfamily AF1862-like
SCOP superfamily DsbB-like
SCOP superfamily Bacillus cereus metalloprotein-like
SCOP superfamily AF1782-like
SCOP superfamily MPN010-like
SCOP superfamily TSP9-like
SCOP superfamily Nop10-like SnoRNP
SCOP superfamily FdhE-like
SCOP superfamily Peptidoglycan deacetylase N-terminal noncatalytic region
SCOP superfamily CofE-like
SCOP superfamily NE0471 N-terminal domain-like
SCOP superfamily YwmB-like
SCOP superfamily STIV B116-like
SCOP superfamily YojJ-like
SCOP superfamily TTP0101/SSO1404-like
SCOP superfamily CofD-like
SCOP superfamily Duffy binding domain-like
SCOP superfamily PriB N-terminal domain-like
SCOP superfamily YidB-like
SCOP superfamily SipA N-terminal domain-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily YozE-like
SCOP superfamily Type III secretion system domain
SCOP superfamily MukF C-terminal domain-like
SCOP superfamily TM0693-like
SCOP superfamily HP1531-like
SCOP superfamily PA2201 N-terminal domain-like
SCOP superfamily LemA-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily PPK N-terminal domain-like
SCOP superfamily Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain
SCOP superfamily Connexin43
SCOP superfamily Viral ssDNA binding protein
SCOP superfamily RalF, C-terminal domain
SCOP superfamily YbjQ-like
SCOP superfamily Flagellar hook protein flgE
SCOP superfamily Hypothetical protein MPN330
SCOP superfamily RNA-binding protein She2p
SCOP superfamily Avirulence protein AvrPto
SCOP superfamily XseB-like
SCOP superfamily DNA methylase specificity domain
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily OmpH-like
SCOP superfamily CbiD-like
SCOP superfamily Putative modulator of DNA gyrase, PmbA/TldD
SCOP superfamily Hemolytic lectin CEL-III, C-terminal domain
SCOP superfamily Toprim domain
SCOP superfamily Bacteriocin immunity protein-like
SCOP superfamily Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
SCOP superfamily PhoU-like
SCOP superfamily DnaK suppressor protein DksA, alpha-hairpin domain
SCOP superfamily Proline/betaine transporter ProP, C-terminal cytoplasmic domain
SCOP superfamily Autotransporter
SCOP superfamily Oligosaccharyltransferase subunit ost4p
SCOP superfamily Major capsid protein VP5
SCOP superfamily Antivirulence factor
SCOP superfamily Hypothetical protein HI1480
SCOP superfamily Hypothetical protein TM0160
SCOP superfamily Sensory domain-like
SCOP superfamily OmpA-like
SCOP superfamily CheC-like
SCOP superfamily Hypothetical protein YwqG
SCOP superfamily Colicin D/E5 nuclease domain
SCOP superfamily F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD)
SCOP superfamily DNA polymerase III psi subunit
SCOP superfamily Putative cyclase
SCOP superfamily Bacterial fluorinating enzyme, C-terminal domain
SCOP superfamily Hypothetical protein YgiW
SCOP superfamily Hypothetical protein YfhH
SCOP superfamily Dextranase, N-terminal domain
SCOP superfamily C-terminal domain of Ku80
SCOP superfamily P40 nucleoprotein
SCOP superfamily YcfC-like
SCOP superfamily Methenyltetrahydrofolate cyclohydrolase-like
SCOP superfamily Oxygen-evolving enhancer protein 3,
SCOP superfamily Typo IV secretion system protein TraC

Jump to [ Top of page · Assignment statistics ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.