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Domain assignment for gi|150016482|ref|YP_001308736.1| from Clostridium beijerinckii NCIMB 8052

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|150016482|ref|YP_001308736.1|
Domain Number 1 Region: 75-166
Classification Level Classification E-value
Superfamily Fibronectin type III 3.88e-16
Family Fibronectin type III 0.0001
Further Details:      
 
Domain Number 2 Region: 184-275
Classification Level Classification E-value
Superfamily Fibronectin type III 6.53e-16
Family Fibronectin type III 0.0000997
Further Details:      
 
Domain Number 3 Region: 1205-1313
Classification Level Classification E-value
Superfamily L domain-like 0.0000000000000816
Family Ngr ectodomain-like 0.02
Further Details:      
 
Domain Number 4 Region: 399-422,488-866
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.00000942
Family Virulence factor P.69 pertactin 0.074
Further Details:      
 
Weak hits

Sequence:  gi|150016482|ref|YP_001308736.1|
Domain Number - Region: 896-1170
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.0135
Family Pectate lyase-like 0.071
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|150016482|ref|YP_001308736.1|
Sequence length 1530
Comment fibronectin type III domain-containing protein [Clostridium beijerinckii NCIMB 8052]
Sequence
MNNLKLKIISCTLSFFMFFSLCGTSVNAIEYASSASNEIATTNSQITKNAAVDVTTSSEA
VQNSLAEVTTGAAVTVDMQAPTVPTKLVASSITSTSCILSWTASTDNVGVTEYDIYSGTT
KIGSTTGETTFEVTGLMPNTSYSFTIAAKDLAGNASEASGALSVTTIMNTEVTTGSAVTV
DMQAPTVPTNLVSSSITSTSCILSWTASTDNIGVTEYDIYNGTTKIGSTTGETTYDVTGL
MPNTSYSFTIVAKDLAGNTSEVSSILTIKTLSSSIIISSDLKLTKDIEYQDVEITSGEVD
LNGHTMTINGNLIQSNGEVNIDGGQLIVNGDYRLQTKSNSNGTVSYDYGSGYLTMNKASD
YVLVNGNFIDQSRYSGTLTAGILEVKGDFYEKVYYTYWGDYDGNFSASGSHKVILSGTGT
QTVSFDNRGKSHFNILEISSSANSIKFATAIPLNKFEGDSKKVSNLNLYFCAPLSSDLTI
ENDLILSNGLDLNGHVLTVNNLVISGGTMQLNENNVNINGYFIINGGTVNLIGDSHINGD
LNINGGEVDLKGHTMTINGNLIQSNGEVNIDGGQLIVNGDYRLQTKSNSNGTVSYDYGSG
YLTMNKASDYVLVNGNFIDQSRYSGTLTAGTLEVKGDFYEKVYYTYWGDYDGNFSASGSH
KVILSGTGTQTVSFDNRGKSHFNILEISSSANSIKFATAIPLNKFEGDSKKVSNLNLYFC
APLSSDLTIENDLILSNGLDLNGHVLTVNNLVVSGGTMQLNENNVNINGYFIINGGTVNL
IGDSHINGDLNINGGEVDLNGHTMTINGNLIQSNGEVNIDGGQLIVNGDYRLQTKSNSNG
TVSYDYGSGYLTMNKASDYVLVNGNFIDQSRYSGTLTAGTLEVKGDFYEKVYYTYWGDYD
GNFSASGSHKVILSGSGTQTVSFDNRGKSHFNILEISSSANSIKFATAIPLNKFEGDSKK
VSNLNLYFCAPLSSDLTIENDLILSNGLNFNGGNLNISRNLVISGGTIDLHGGNLNINGD
LIISGGTFNLDGGRTNVNGNITQPGGELYVNGGQLTVNGDYRIQVKDDLNGTVCSEGSLK
MDNAADYILVKKNFVIQSYNSSSSLTAGTLEVKGDFYQKKGFRYYFYGSSYCYNNFVASG
SHKVILYGTASFENPDYSHFNILVNGKTSSTSDSEIDFYFDLNTGTITGYRGSGTEVIIP
NTIGGVKVTRIGREAFEGCDHIISITIPDSVTSIGYDAFYNCSSLKNLTIPSSVKSIEYG
AFGGCSRLTSLSFSDGLASIGDKAFYNCISLMDISIPNSVTSMEGSPFYYCRATYYVENK
ALRDLLISHGVSPYKIILHGQVVLDDIDTNDSNSANQAQPPLTYVICVGYGGSIGCGVGA
TGAAGVAKDSDGTVVGLISAGGGGTTPAAGAGWQIQLTNAKSVESLKGWGTSAGGSATFF
GVGGGIDYETSTNPDGTPWSGVVISVGANNVIAPFELHANESYTWEITAQDVDKVNNEIN
SKIEWLNNNLSNEEKKQINNIIGGALLTLS
Download sequence
Identical sequences A6LTV0
gi|150016482|ref|YP_001308736.1| 290402.Cbei_1606

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