SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|257060998|ref|YP_003138886.1| from Cyanothece sp. PCC 8802

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|257060998|ref|YP_003138886.1|
Domain Number 1 Region: 7-203
Classification Level Classification E-value
Superfamily Thiamin diphosphate-binding fold (THDP-binding) 1.77e-67
Family Branched-chain alpha-keto acid dehydrogenase Pyr module 0.00000627
Further Details:      
 
Domain Number 2 Region: 187-323
Classification Level Classification E-value
Superfamily TK C-terminal domain-like 3.8e-40
Family Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain 0.00015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|257060998|ref|YP_003138886.1|
Sequence length 327
Comment transketolase [Cyanothece sp. PCC 8802]
Sequence
MAETLLFNALRQAIDEEMAHDETVFVLGEDVGHYGGSYKVTKDLYKKYGDLRVLDTPIAE
NSFTGMAVGAAMTGLRPIIEGMNMGFLLLAFNQIANNAGMLRYTSGGNFKIPMVIRGPGG
VGRQLGAEHSQRLEAYFHAVPGLKIVACSTPYNAKGLLKAAIRDDNPVLFFEHVLLYNLK
EKLPDTEYIVPLDKAEIVRPGKDVTILTYSRMRHHCVQALKTLEKEGYDPEIIDLISLKP
FDLETIGASIRKTHRVIIVEECMKTGGIAAELIALINDNFFDELDAPVIRLSSQDIPTPY
NGTLENLTIVQPAKIVEAVQKMVALRV
Download sequence
Identical sequences 395962.Cyan8802_3213 gi|257060998|ref|YP_003138886.1| WP_015784583.1.62203

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]