SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|126465718|ref|YP_001040827.1| from Staphylothermus marinus F1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|126465718|ref|YP_001040827.1|
Domain Number 1 Region: 7-137
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 8.6e-38
Family Translational machinery components 0.00058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|126465718|ref|YP_001040827.1|
Sequence length 137
Comment 30S ribosomal protein S9 [Staphylothermus marinus F1]
Sequence
MSVKGKIVIATGKRKTSIARAVIKPGEGRVWINGVPLEIWPIELARLKMYEPLVIAGDLW
KRVDIYVNVRGGGVMSQADAVRMAIARGLLEYADNNPELRKIFTEYDRYMLSGDPRRTEP
EKWGRYSARRRWQKSYR
Download sequence
Identical sequences A3DMQ9
gi|126465718|ref|YP_001040827.1| WP_011839110.1.69113 399550.Smar_0818

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]