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Domain assignment for gi|113954166|ref|YP_729781.1| from Synechococcus sp. CC9311

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|113954166|ref|YP_729781.1|
Domain Number 1 Region: 2-154
Classification Level Classification E-value
Superfamily N-terminal domain of MutM-like DNA repair proteins 1.96e-34
Family N-terminal domain of MutM-like DNA repair proteins 0.00083
Further Details:      
 
Domain Number 2 Region: 150-242
Classification Level Classification E-value
Superfamily S13-like H2TH domain 1.24e-28
Family Middle domain of MutM-like DNA repair proteins 0.00057
Further Details:      
 
Domain Number 3 Region: 238-288
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 3.99e-16
Family C-terminal, Zn-finger domain of MutM-like DNA repair proteins 0.0049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|113954166|ref|YP_729781.1|
Sequence length 290
Comment formamidopyrimidine-DNA glycosylase [Synechococcus sp. CC9311]
Sequence
MPELPEVETVRRGLANRLDQFVISDLEVCRDRAIASPGGPECFESGLLNCRVGNWMRRGK
YLYSELYRPGSAEANSAEESAGYWGVHLRMTGQFQWIEDDTPPCKHTRVRFWNAKGQELR
FVDLRSFAEMWWVPPDTAVESIITGLKKLGPEPFSQDFKTQYLQERFKGSTRSIKAALLD
QSIVAGTGNIYADESLFAAGICPQTPAGQLNRKQLEKLRECLIEILELSIGAGGTTFSDF
RDLEGVNGNYGGQAAVYRRTGQPCPKCGKAIERIKLAGRSTHWCSSCQTS
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Identical sequences Q0ICP1
gi|113954166|ref|YP_729781.1| 64471.sync_0561 WP_011618509.1.57161

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