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Domain assignment for gi|113954641|ref|YP_731316.1| from Synechococcus sp. CC9311

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|113954641|ref|YP_731316.1|
Domain Number 1 Region: 4-578
Classification Level Classification E-value
Superfamily Prokaryotic type I DNA topoisomerase 1.27e-178
Family Prokaryotic type I DNA topoisomerase 0.00000000254
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|113954641|ref|YP_731316.1|
Sequence length 905
Comment DNA topoisomerase I [Synechococcus sp. CC9311]
Sequence
MANTLVIVESPTKARTIRGFLPKGYRVEASMGHVRDLPNNASEIPAAQKGQKWANLGVNT
EADFEPLYVVPKDKKKIVRELKDALKGVDELLLATDEDREGESISWHLLQLLSPKVPVKR
MVFHEITKEAISRALDDTRELDMELVHAQETRRILDRLVGYTLSPLLWKKVAWGLSAGRV
QSVAVRLLVQRERARRAFRSGSYWDLKAALEQQSIRFEAKLTHLDGTKVATGSDFDESTG
GLKQGSKVRLLSEDDARSLSLALQSSDWNVSSVEEKPTVRRPVPPFTTSTLQQESNRKLR
LSARETMRCAQGLYERGYITYMRTDSVHLSDQAITAARSCVESRYGKDYLSNGPRQFSTK
SRNAQEAHEAIRPSGESFRAPSETGLEGRDLSLYELIWKRTVASQMAEARLTMLAVDLTV
GEAVFRSNGKRIDFPGFFRAYVEGSDDPDAALEGQEVLLPALNVGDSPKIHDVEALGHQT
QPPARFSEASLVKMLEKEGIGRPSTYASIIGTIVDRGYSSLNNNSLTPSFTAFAVTALLE
EHFPDLVDTGFTARMETTLDEISTGKVQWLPYLDGFFKGDEGLESLVQKREGDIDPGASR
TIDLEGLPCVVRIGRFGAYLESKRVGDDGEEELIKATLPKEITPGELDQEQAELILKHKA
DGPEALGEDPETGDLVYLLFGQYGPYVQKGQVSDENPKPKRASLPKGVKPEDLKLDDALG
LLRLPRLLGEHPESGKVQAGLGRFGPYVVWDKGKGEKDYRSLKGEDDVLAIGLSRALELL
AMPKRGRGGRTALKDLGKPEGSEETVQVFDGPYGLYVKQGKVNASLPEGKGADDITLKEA
IELLEAKAATKKTTKRKTSTTKSTSKAKSTTKSAKAKPAARKAPATTKTGRLRASAVRII
RPGDA
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Identical sequences Q0I8A6
64471.sync_2114 gi|113954641|ref|YP_731316.1| WP_011620028.1.57161

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