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Domain assignment for gi|113954753|ref|YP_730616.1| from Synechococcus sp. CC9311

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|113954753|ref|YP_730616.1|
Domain Number 1 Region: 2-350
Classification Level Classification E-value
Superfamily Thiamin diphosphate-binding fold (THDP-binding) 8.42e-73
Family TK-like PP module 0.01
Further Details:      
 
Domain Number 2 Region: 313-479
Classification Level Classification E-value
Superfamily Thiamin diphosphate-binding fold (THDP-binding) 8.62e-64
Family TK-like Pyr module 0.038
Further Details:      
 
Domain Number 3 Region: 492-624
Classification Level Classification E-value
Superfamily TK C-terminal domain-like 3.14e-34
Family Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain 0.002
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|113954753|ref|YP_730616.1|
Sequence length 647
Comment 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. CC9311]
Sequence
MHLSELTHPNQLHGLSETQLEAVAKQIRERHLEVVSNSGGHLGPGLGVVELTLALYQTLD
LDRDKVVWDVGHQAYPHKLITGRYGSFDSLRQQGGVAGYLKRTESRFDHFGAGHASTSIS
AALGMAIARDRQGLDYKCVAVIGDGALTGGMALEAINHAGHLPSTPLLVVLNDNDMSISP
PVGALSTYLNRMRLSPPLQFLSGSVEESVRNLPFMGGEIPPELNRLKESMRRLAVPKVGA
VFEELGFTYMGPIDGHDIAEMTRTFQSAHRVGGPVMVHVVTKKGKGYPYAEADQVGYHAQ
SAFNLSTGKARPSKTPKPPSYSKVFGQTLVKLCEQNPKVVGITAAMATGTGLDILQKALP
DQYIDVGIAEQHAVTLSAGMACDGLRPVVAIYSTFLQRAFDQLIHDVGIQKLPVTFVLDR
AGIVGADGPTHQGQYDISYMRAIPNFTVMAPKDEAELQRMLVTCLNHDGPTALRIPRGPG
EGVPLMEEGWEALPIGCGEVVREGNDVLIVAYGAMVPKAMATAKCLAAVGVEVAVINARY
LRPLDEALIHPMAKQIGKIVTMEEGALAGGFGSAVLESLQEKGLAIPMLRIGIPDRLVDH
ATPQQSFEALGLTPDQMAVRIKQHFLLSTSGSLTLEEKAPAEVSSAG
Download sequence
Identical sequences Q0IAA6
WP_011619333.1.57161 64471.sync_1410 gi|113954753|ref|YP_730616.1|

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