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Domain assignment for gi|123965733|ref|YP_001010814.1| from Prochlorococcus marinus str. MIT 9515

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|123965733|ref|YP_001010814.1|
Domain Number 1 Region: 4-582
Classification Level Classification E-value
Superfamily Prokaryotic type I DNA topoisomerase 7.19e-175
Family Prokaryotic type I DNA topoisomerase 0.00000000383
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|123965733|ref|YP_001010814.1|
Sequence length 870
Comment DNA topoisomerase I [Prochlorococcus marinus str. MIT 9515]
Sequence
MDHTLVIVESPTKAKTIRRFLPPNYEVLASMGHVRDLPKGAAEIPASVKKEKWSRIGVNT
TEDFEPLYIVPKEKKKVVKDLKNALKDATQLLLATDEDREGESISWHLMQILKPKIPTKR
MVFHEITKKAINKALDETREIDMELVQAQETRRILDRLFGYELSPLLWKKVAPRLSAGRV
QSVSVRLLVNKERERRAFKKATYWGLKATLLKDNVFFDSKLSSLSGQKISNGSDFDEKTG
KLKNGNKSLILNEERAKSLLKSLSEEKWRVIKIEKKPTTRKPVPPFTTSTLQQEANRKLR
LSARETMRCAQGLYERGFITYMRTDSVHLSEQAIRAARECVQSRYGKEYLSSSVRQFNSK
ERNAQEAHEAIRPAGEVFKTPSDTDLAGRDLSLYELIWKRTVASQMAEARLTMVNAEIEV
GEGLFKSSGKSIDFAGFFRAYVEGSDDPSASLEQQEVILPNLTLGSTLEVASKEATYHET
KSPARYTEAALVKVLEKEGIGRPSTYASIIGTIVDRGYANISSNSLSPTFTAFAVTALLE
EHFPDLVDTTFTAKMESSLDEISSGNLEWLPYLETFYKGKNGLEVKVQKTEGDIDGKAYR
QVDFDDLPCVVRIGSNGPWLEGVKIDESGNEIQAKGNLPMDITPGDLDKKKVDQILSGPS
DLGTDPKTGEQVFLRFGPYGPYVQLGNIEEGKAKPRRASLPKDLKTDDLSLSEALELLSL
PKLLGEHPEGGIVEADRGRFGPYIKWIKDEDTSENRSLKKEDDVFKVDLKRALEILAMPK
LGRGGQEVIKDFGKPKELNDKVQVLNGKYGIYVKCGKINVSLPKDTDLEKFTIENALILL
EEKMKDKKVSVFKKNKVISKKTKKNKKIKK
Download sequence
Identical sequences A2BV96
gi|123965733|ref|YP_001010814.1| WP_011819815.1.83733 167542.P9515_04981

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