SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|123965552|ref|YP_001010633.1| from Prochlorococcus marinus str. MIT 9515

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|123965552|ref|YP_001010633.1|
Domain Number 1 Region: 17-389
Classification Level Classification E-value
Superfamily PLP-dependent transferases 2.48e-104
Family GABA-aminotransferase-like 0.0000587
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|123965552|ref|YP_001010633.1|
Sequence length 404
Comment pleiotropic regulatory protein [Prochlorococcus marinus str. MIT 9515]
Sequence
MINMQIPPFTLERQFKEIGSDIEDAVLKVLKGGQYVGGHEISRFEENFASLIGVNHAIGC
NSGTDALILALRALDIGEGDEVITSSFSFFATAEAISAVGANPVLVDINPTNYLINIDLI
EREINSNTKAIMPVHLFGNAVNMKSIKVLAKKYDLKIIEDCAQATCTLWGNSKVGSIGDI
GCFSFFPTKNLGAAGDGGAVTTSDYNIARKVRELAVHGSPKRYHHTQIGYNSRLDTLQAA
VLNIKLKSLSKWISNRQKIANNYFELLEENSFLHFPMIDFDSISHSWNQFVIRLKNYNYD
INNNYSNLFETDFNKNNSLRNLLKLRLSEKGINSIIYYPIPIHAQIAYKNINFSREKLIN
TEIVCTEVLSLPMYPEISYEEQVYVSKNFNIILKKCIDELQICA
Download sequence
Identical sequences A2BUR5
gi|123965552|ref|YP_001010633.1| 167542.P9515_03171

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]