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Domain assignment for gi|147669297|ref|YP_001214115.1| from Dehalococcoides sp. BAV1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|147669297|ref|YP_001214115.1|
Domain Number 1 Region: 4-571,631-639
Classification Level Classification E-value
Superfamily Prokaryotic type I DNA topoisomerase 2.35e-191
Family Prokaryotic type I DNA topoisomerase 0.000000000668
Further Details:      
 
Domain Number 2 Region: 580-624
Classification Level Classification E-value
Superfamily Zinc beta-ribbon 0.000000017
Family Prokaryotic DNA topoisomerase I, a C-terminal fragment 0.074
Further Details:      
 
Weak hits

Sequence:  gi|147669297|ref|YP_001214115.1|
Domain Number - Region: 630-663
Classification Level Classification E-value
Superfamily Zinc beta-ribbon 0.000272
Family PhnA zinc-binding domain 0.049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|147669297|ref|YP_001214115.1|
Sequence length 703
Comment DNA topoisomerase I [Dehalococcoides sp. BAV1]
Sequence
MKEKLVIVESPAKARTISKMLGKDFNIMATMGHIRDLPKSTLGVDVENNFTPKYVSLKAK
AKVIKELKEAVKHSKAIYLATDPDREGEAIAWHISEVTKANLSNPKRVVFHEITKEAIDK
AFKNTRELDMDLVNAQQARRVLDRLVGYKLSPLLWRKVQRGLSAGRVQSVSLKIIVDRER
EIEKFVSTEYWNIEALLSKKVKSAAFKATLAGYVTKGKLEIHNESEADQIKKELEVSDYQ
VLKIKRKSNLRQSPAPFITSTLQQEAWRKLRFSAKQTMVIAQQLYEGLNVEGEGEVGLIT
YMRTDSTNVARTAVAETRDYITEKYGPAYLPKQARVFSSKVKGAQEAHEAIRPTRINRTP
DFIKKSLSADQFKLYQLIWQRMMASQMSPAVFDNTTIDIEAKHQPSKTRYLLRTTSSVNT
FPGFTIVYIEGKDEDEEKEQSSLPPMEEGEELKLKSLDATQHFTQPPPRYTEATLIKALE
QNGIGRPSTYAPTISTIQEREYITKLKGSLKPSELGMLVNDLLVEHFPDIIGIDFTAAME
AELDKIATEKLDWVPIIRRFYEPFIKEIEAASEKIEKIKPPEEELDELCPECNAKLVIKR
GRFGKFIACSRYSKEDDGCRYTRSYQIKTGAKCPDCNSDIVEKYSKKGKIFYGCAGYPNC
KFVSFYKPLTKPCPECGALMTKSGQNWAKCTKCGKRKKLEDES
Download sequence
Identical sequences 216389.DehaBAV1_0652 gi|147669297|ref|YP_001214115.1| WP_011928996.1.45256

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