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Domain assignment for OGLUM03G14520.1 from Oryza glumaepatula 22

Domain architecture


Domain assignment details

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Strong hits

Sequence:  OGLUM03G14520.1
Domain Number 1 Region: 115-202
Classification Level Classification E-value
Superfamily BRCT domain 3.53e-22
Family DNA topoisomerase II binding protein 1, TopBP1 0.053
Further Details:      
 
Domain Number 2 Region: 1141-1227
Classification Level Classification E-value
Superfamily BRCT domain 0.0000000000000016
Family BRCT domain 0.021
Further Details:      
 
Domain Number 3 Region: 1379-1445
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.00000000000332
Family PHD domain 0.0047
Further Details:      
 
Domain Number 4 Region: 15-95
Classification Level Classification E-value
Superfamily BRCT domain 0.0000000000157
Family DNA topoisomerase II binding protein 1, TopBP1 0.044
Further Details:      
 
Weak hits

Sequence:  OGLUM03G14520.1
Domain Number - Region: 1254-1335
Classification Level Classification E-value
Superfamily BRCT domain 0.0245
Family DNA topoisomerase II binding protein 1, TopBP1 0.039
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) OGLUM03G14520.1
Sequence length 1462
Comment pep:novel chromosome:ALNU02000000:3:10995104:11002353:1 gene:OGLUM03G14520 transcript:OGLUM03G14520.1 description:""
Sequence
MASPISGSDDDDEHLFAGVRFFLVGFDPLSESQYRSEMVRRSGVDAGRFGSGCTHVIVCG
LVYDDPACVAARAEGKKVVTELWVEASLDRGMLADADRVMYWPVRDLNGIAGSESLRICL
TGYQRSDREDIMSMVSLMGAQFSKSLNPDVVTHLICYKFEGEKYEAAKKAKLKFNFNIKL
VNHRWLEDCLKCWKILPVDDYSKSSWELEIMEAQAKDSEDEEDVGQRSFRNKIVRSTLNP
KGSAGTSANPVVNAPIRSPTISSGNIGMVLEKQPNIPGEIRKAEDAVNRIHDVAAQGTPR
TRLAMSANTDFSTPSQIPFIHSDSRGDAAVRDLKNADQIQGNKHKDVGTKTLDVTSGASG
TPCSSKMVVSANHNVHSLNKTNFVEDHGDTDASKADLTTPSREILPANVLDSSNVARGRS
QEDYGATCTPDAAAGQSTINDNVTNNNIGLKSGSNASLNINNKSSLKPLEKSVLPEQYSA
NRIGPLQGAEGSMMRADSSISTARKGDKIIADLAGVQVLKGGENIQDENVLDGAYSQKKK
CSISPVLFKVQNGDTGKETGALNSPSANRLSDTSEPAIWSSVGTNPSEANNVDLGKQQSG
SSKSRSRTALKHGNLVDGIKLPEYSSSETNAQPPPKPKELLATSLSATVHDVKRCPDFSF
QNKDGDYAQDSGNALNQDGSPLMRKTENVLAKVRTSDISLHSSRKSKLVPSSGNGDTEMS
DALDIEKNKAAVASNCKPEKVVPDENIKADQLKDFPGTSNNVLRQTGYLKKVASRKGMKA
STKRPRSASKVVDEPVVDDGKTKTVVSESEPDKMIAHKHIGETAKDGPDSVNAAEHRTNS
SDKVLTDGASRISRRLQNVHTMKNDRHAASNLESSKMISEENTGIGITPKKFVSNATTEG
HQTNSPKMLPNTSMRNTFAKRSRVSDTKMTGESSADKTETVAGKSLFDDLFPSQNIDHPK
KLSSSASADGCGSLSCKNASPARVRNAVAKRKIKALEDKSDSKLGKIGGAIVSAAKAVAS
RGIEESSCNINKVSSDQNSVKTDGMRDVSGLFSSDTSVIDRSENLNNSKLRCSKRNKSLS
LDHEKENMQDNGTLSSKSNGRTAIMNSNLDANSMKHGANMFNEPNRIKGNGPGTLITPEP
TCFILSGHRQQRKDYRSILRRLKARVCRDSHHWSYQATHFIAPDPLKRTEKFFAAAAAGK
WILKTDYLTSCNEVGKLLDEEPFEWSGTGLNDGETISFEAPKKWRVLRQQMGHGAFYGMQ
IIVYGQLVSPSLDTVKRAVRSGDGTILATSPPYTRFLNSGVDFAVVSSAMPSADAWVQQF
ISHDIPCITADYLVEYVCKHGHPLDRHVLFNTNDLANKSLKKLLQNQQEVATDVLKPQED
GDPDDLSCSACGSTDRGEVMLICGNEDGSTGCGVGMHIDCCDPPLEAVPEHDWLCPQCEM
PKATKKSASRVASKSRVSKRKR
Download sequence
Identical sequences A0A0D9Z648
OGLUM03G14520.1

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