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Domain assignment for gi|116754280|ref|YP_843398.1| from Methanosaeta thermophila PT

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|116754280|ref|YP_843398.1|
Domain Number 1 Region: 89-393
Classification Level Classification E-value
Superfamily "Helical backbone" metal receptor 1.07e-49
Family TM0189-like 0.029
Further Details:      
 
Domain Number 2 Region: 28-88
Classification Level Classification E-value
Superfamily Type I dockerin domain 0.00000432
Family Type I dockerin domain 0.0063
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|116754280|ref|YP_843398.1|
Sequence length 429
Comment periplasmic binding protein [Methanosaeta thermophila PT]
Sequence
MGTAKSISALIVISCFIITQASAGNFVLHIFGNANMDDRIDENDLEFIRMVIQGEKSATE
LCDADHNGVVDASDITQVERIINGTATEITVIDSDGNVVTLPQPLERLVIYNHQCAEVLQ
LMGVDDRVVGVRDTFAEQRNRFPRLSQVTSIGSGGEPNIEAILKVKPQVVLAYTFYPVED
ALDAKLPPDVKVLRLDCECSGIGPDAMREKITMMGYIFGTQDRAEKYLKWHDAIVSQVEE
RVKTIPEDKRVRVYLESTPEGSNPQTSRTAIGSGHAANKLIEMAGGVNIAVGHLPKYLDT
PTEYGEIETEWVISQNPDVIVGRAMGKGIRPYENVNSSLLQSYDREIRNLPGFDRVKAVQ
DGRVYIITNDYAVTPNYPSALLALAKWFYPELFQDVDPVAAHQEYVNMMGLDFDVRTRGA
FTFHAGNSS
Download sequence
Identical sequences A0B7T4
gi|116754280|ref|YP_843398.1| 349307.Mthe_0972

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