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Domain assignment for gi|257055608|ref|YP_003133440.1| from Saccharomonospora viridis DSM 43017

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|257055608|ref|YP_003133440.1|
Domain Number 1 Region: 536-646
Classification Level Classification E-value
Superfamily RuvA domain 2-like 5.72e-25
Family Hef domain-like 0.071
Further Details:      
 
Domain Number 2 Region: 17-101
Classification Level Classification E-value
Superfamily GIY-YIG endonuclease 6.28e-23
Family GIY-YIG endonuclease 0.0058
Further Details:      
 
Domain Number 3 Region: 194-247
Classification Level Classification E-value
Superfamily C-terminal UvrC-binding domain of UvrB 0.00000000000000915
Family C-terminal UvrC-binding domain of UvrB 0.004
Further Details:      
 
Weak hits

Sequence:  gi|257055608|ref|YP_003133440.1|
Domain Number - Region: 493-547
Classification Level Classification E-value
Superfamily FAD/NAD(P)-binding domain 0.0136
Family FAD/NAD-linked reductases, N-terminal and central domains 0.066
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|257055608|ref|YP_003133440.1|
Sequence length 658
Comment Excinuclease ABC subunit C [Saccharomonospora viridis DSM 43017]
Sequence
MADPSTYRPAPGTIPDSPGVYKFRDAGGRVIYVGKAKSLRSRLNSYFTDLAGLHPRTRQM
VTTAASVEWTVVSTEVEALQLEYNWIKEFDPRFNVRYRDDKTYPVLAVTLNEEFPRLHVY
RGPRKKGVRYFGPYAHAWAIRETLDLLLRVFPARTCSTGVFRRHSQIGRPCLLGYIDKCS
APCVGAVSAERHREIVEGFCDFLSGRTDQMVRKLEREMAEASEALEFERAARLRDDLAAL
RKAMEKQAVVLGDGTDADVIAFAHDELEAAVQIFHVRGGRVRGQRGWVIDKVEEMDVSDL
VEQFLSQFYAGQAELAAETPTDGVVVPREVLVPELPANAESMEQWLSELRGSRVRLRVPQ
RGDKRTLAETVARNAEEAFSQHKLRRAGDLTARSAALSELQEYLGLDSAPLRIECVDVSH
LAGTDVVASLVVFEDGLPRKSEYRRFALREAATEGDVAAIAEVVRRRFSRYLKETQAQGV
ERGTETPGVNQALDPETGKPRKFAYPPNLLVVDGAGPQATAAADVLAELGITDVAVVGLA
KRLEEVWLPADDNPVILPRTSDALYLLQRVRDEAHRFAIRYQRQKRSKRVQESVLDGIPG
LGQVRKAALIKHFGSVKKIREATVAEIAAVPGFGTRTAEVVHAALAGGRTDSRGESQT
Download sequence
Identical sequences C7MSL5
gi|257055608|ref|YP_003133440.1| WP_015785926.1.37385 WP_015785926.1.67378 WP_015785926.1.81884 471857.Svir_15780

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