SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|111219869|ref|YP_710663.1| from Frankia alni ACN14a

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|111219869|ref|YP_710663.1|
Domain Number 1 Region: 90-225
Classification Level Classification E-value
Superfamily GntR ligand-binding domain-like 4.45e-22
Family GntR ligand-binding domain-like 0.0048
Further Details:      
 
Domain Number 2 Region: 19-104
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 1.47e-16
Family GntR-like transcriptional regulators 0.024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|111219869|ref|YP_710663.1|
Sequence length 235
Comment GntR family transcriptional regulator [Frankia alni ACN14a]
Sequence
MRVPRPPTAWVATLSTSWSGSAREAILRELKRVILDGAAAPGLPIPVDEVAARYQVSRIP
VREALMSLVGEGLVEHRSRAGYTVATLTPGELREFYLVREALEAAALGAAVRRATAADDA
LVSQAHAATSEAIRAGDSRGHHRESRRFHLALVNAGGMPRLARMFESAWNMTEPARPMDY
ASRDAVDLLNDDHERMLHAFRARDAAALLEVSRLHHGRLQNFVLALPESGELGQG
Download sequence
Identical sequences Q0RTP7
WP_011601632.1.38265 gi|111219869|ref|YP_710663.1| 326424.FRAAL0375

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]