SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|119386247|ref|YP_917302.1| from Paracoccus denitrificans PD1222

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|119386247|ref|YP_917302.1|
Domain Number 1 Region: 77-217
Classification Level Classification E-value
Superfamily GntR ligand-binding domain-like 1.88e-23
Family GntR ligand-binding domain-like 0.008
Further Details:      
 
Domain Number 2 Region: 5-93
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 1.79e-18
Family GntR-like transcriptional regulators 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|119386247|ref|YP_917302.1|
Sequence length 247
Comment GntR family transcriptional regulator [Paracoccus denitrificans PD1222]
Sequence
MSQAHTSTEVATQKLREAILSGELLPGDKLHQDRLAEMLGISRTPLRAALTALAQKGLVS
YASNRGFYVREFSFAEVSGAFEVRAELEALACRLAAGNMTDEARRHLADLVAEGDRLLSP
GALLPENLADYRRMNVNFHTAVMALSGNAWIMEFVQSLHNVPAASDRVIMWRDFRVLERS
HDDHHRIAHALSKGQGERAAALMREHITFALEHLHEQMKLYPQDFLRMPSFDKPAKGRSG
QRNRRTT
Download sequence
Identical sequences A1B7W2
318586.Pden_3536 gi|119386247|ref|YP_917302.1| WP_011749782.1.25907 WP_011749782.1.3707 WP_011749782.1.52749

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]