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Domain assignment for gi|119387395|ref|YP_918429.1| from Paracoccus denitrificans PD1222

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|119387395|ref|YP_918429.1|
Domain Number 1 Region: 189-319
Classification Level Classification E-value
Superfamily GntR ligand-binding domain-like 0.000000000000366
Family GntR ligand-binding domain-like 0.015
Further Details:      
 
Domain Number 2 Region: 22-92
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 0.00000000000096
Family GntR-like transcriptional regulators 0.019
Further Details:      
 
Weak hits

Sequence:  gi|119387395|ref|YP_918429.1|
Domain Number - Region: 136-184
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 0.0108
Family ROK associated domain 0.071
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|119387395|ref|YP_918429.1|
Sequence length 343
Comment GntR family transcriptional regulator [Paracoccus denitrificans PD1222]
Sequence
MADRSRNLTSQSPEALAGSAVTAGPAYATIEARIRKSIEAGALPDGTVLLEGPLAALFGS
SRSPVKRALSALEEDGLLSRFDGRGLLVGNKGIPRRVKILPDMLLLDDDEGLNAKSFAWQ
PHYYDFEREIILRSVFGRARVNELALARHLDVSRTVAHDLLIHAREVGIVYKDDGSRWWI
VPLDEARFDNLYELRILLEPVAMTSAIGRIPDERLDEIEARLHRVQERFPAVTGADLDLL
ESDLHIDCIGHGCNPEIIEALKRSHCILVAGKHIQLALGSDARVDPFMDEHLEIVAALRA
QDPIAVRETLVRHLELSAEKAVHRLAAFRGSQRVAELPYILEP
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Identical sequences A1BB39
gi|119387395|ref|YP_918429.1|NC_008688 318586.Pden_4672 gi|119387395|ref|YP_918429.1| WP_011750892.1.25907 WP_011750892.1.3707 WP_011750892.1.52749

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