SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|557693958|ref|YP_008797012.1| from Candidatus Caldiarchaeum subterraneum

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|557693958|ref|YP_008797012.1|
Domain Number 1 Region: 191-457
Classification Level Classification E-value
Superfamily ClpP/crotonase 4.13e-60
Family Biotin dependent carboxylase carboxyltransferase domain 0.00000912
Further Details:      
 
Domain Number 2 Region: 6-221
Classification Level Classification E-value
Superfamily ClpP/crotonase 7.63e-54
Family Biotin dependent carboxylase carboxyltransferase domain 0.00000527
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|557693958|ref|YP_008797012.1|
Sequence length 467
Comment propionyl-CoA carboxylase beta chain [Candidatus Caldiarchaeum subterraneum]
Sequence
MSSGSVFDRINSLLDAGSFRPILSGVEQHGADMPHRPGDGVVAGFGKIGGRNVAVFAHDP
AFAGGSLGEVGVRKIAKLYELAARFGYPIIGLADSSGARIQEGARSLIAVGELIKTANKA
HGKIPQINVIIAGGVGGAAFTAAVGDVVIGVAKTGYMFLHGPRAVKHATGQDVSIMELGS
VKTLAASSGLIDFVTEDEAQAISLVKKLLSYLPSNYLATPPTSIATESTIKQDLESTETR
RLIAEIIDPGTFLEFKADYARNLITGLGRVDGLVVGVVANEPNVFKGYIDGKACVKLSRF
VDFCNSFNIPVLTIVDTPGFEPGVAAEHGGIIREGTWVYRSYLNATVPKVTLIAGKAYGG
AYIAMCSKGIGADYVLALPDAEVAVQPLEVSAEILFRKELEKLPDDQKAAAFAQYVEALR
TKSRGDALLSIGVADVIVKREEVKKTVSSVLHSLYDGYVKNSSLNRS
Download sequence
Identical sequences E6N5K3
gi|557693958|ref|YP_008797012.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]