SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|153931567|ref|YP_001383190.1| from Clostridium botulinum A str. ATCC 19397

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|153931567|ref|YP_001383190.1|
Domain Number 1 Region: 2-546
Classification Level Classification E-value
Superfamily Metalloproteases ("zincins"), catalytic domain 1.41e-193
Family Clostridium neurotoxins, catalytic domain 0.00000000000000109
Further Details:      
 
Domain Number 2 Region: 549-874
Classification Level Classification E-value
Superfamily Clostridium neurotoxins, "coiled-coil" domain 1.18e-123
Family Clostridium neurotoxins, "coiled-coil" domain 0.00000000000962
Further Details:      
 
Domain Number 3 Region: 1080-1295
Classification Level Classification E-value
Superfamily STI-like 9.94e-82
Family Clostridium neurotoxins, C-terminal domain 0.00000000117
Further Details:      
 
Domain Number 4 Region: 873-1079
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.13e-52
Family Clostridium neurotoxins, the second last domain 0.00000000257
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|153931567|ref|YP_001383190.1|
Sequence length 1296
Comment botulinum neurotoxin type A1 [Clostridium botulinum A str. ATCC 19397]
Sequence
MPFVNKQFNYKDPVNGVDIAYIKIPNAGQMQPVKAFKIHNKIWVIPERDTFTNPEEGDLN
PPPEAKQVPVSYYDSTYLSTDNEKDNYLKGVTKLFERIYSTDLGRMLLTSIVRGIPFWGG
STIDTELKVIDTNCINVIQPDGSYRSEELNLVIIGPSADIIQFECKSFGHEVLNLTRNGY
GSTQYIRFSPDFTFGFEESLEVDTNPLLGAGKFATDPAVTLAHELIHAGHRLYGIAINPN
RVFKVNTNAYYEMSGLEVSFEELRTFGGHDAKFIDSLQENEFRLYYYNKFKDIASTLNKA
KSIVGTTASLQYMKNVFKEKYLLSEDTSGKFSVDKLKFDKLYKMLTEIYTEDNFVKFFKV
LNRKTYLNFDKAVFKINIVPKVNYTIYDGFNLRNTNLAANFNGQNTEINNMNFTKLKNFT
GLFEFYKLLCVRGIITSKTKSLDKGYNKALNDLCIKVNNWDLFFSPSEDNFTNDLNKGEE
ITSDTNIEAAEENISLDLIQQYYLTFNFDNEPENISIENLSSDIIGQLELMPNIERFPNG
KKYELDKYTMFHYLRAQEFEHGKSRIALTNSVNEALLNPSRVYTFFSSDYVKKVNKATEA
AMFLGWVEQLVYDFTDETSEVSTTDKIADITIIIPYIGPALNIGNMLYKDDFVGALIFSG
AVILLEFIPEIAIPVLGTFALVSYIANKVLTVQTIDNALSKRNEKWDEVYKYIVTNWLAK
VNTQIDLIRKKMKEALENQAEATKAIINYQYNQYTEEEKNNINFNIDDLSSKLNESINKA
MININKFLNQCSVSYLMNSMIPYGVKRLEDFDASLKDALLKYIYDNRGTLIGQVDRLKDK
VNNTLSTDIPFQLSKYVDNQRLLSTFTEYIKNIINTSILNLRYESNHLIDLSRYASKINI
GSKVNFDPIDKNQIQLFNLESSKIEVILKNAIVYNSMYENFSTSFWIRIPKYFNSISLNN
EYTIINCMENNSGWKVSLNYGEIIWTLQDTQEIKQRVVFKYSQMINISDYINRWIFVTIT
NNRLNNSKIYINGRLIDQKPISNLGNIHASNNIMFKLDGCRDTHRYIWIKYFNLFDKELN
EKEIKDLYDNQSNSGILKDFWGDYLQYDKPYYMLNLYDPNKYVDVNNVGIRGYMYLKGPR
GSVMTTNIYLNSSLYRGTKFIIKKYASGNKDNIVRNNDRVYINVVVKNKEYRLATNASQA
GVEKILSALEIPDVGNLSQVVVMKSKNDQGITNKCKMNLQDNNGNDIGFIGFHQFNNIAK
LVASNWYNRQIERSSRTLGCSWEFIPVDDGWGERPL
Download sequence
Identical sequences A5HZZ9 Q7B8V4
gi|153936924|ref|YP_001386738.1| gi|148378801|ref|YP_001253342.1| gi|153931567|ref|YP_001383190.1| 413999.CBO0806 441770.CLB_0848 441771.CLC_0862 WP_011948511.1.10598 WP_011948511.1.25111 WP_011948511.1.27088 WP_011948511.1.28409 WP_011948511.1.34822 WP_011948511.1.46754 WP_011948511.1.5655 WP_011948511.1.63111 WP_011948511.1.63218 WP_011948511.1.65258 WP_011948511.1.75721 WP_011948511.1.92266 YP_001253342.1.75347 YP_001386738.1.17653

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]