SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|256394181|ref|YP_003115745.1| from Catenulispora acidiphila DSM 44928

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|256394181|ref|YP_003115745.1|
Domain Number 1 Region: 206-428
Classification Level Classification E-value
Superfamily (Trans)glycosidases 2e-34
Family 1,4-beta-N-acetylmuraminidase 0.022
Further Details:      
 
Weak hits

Sequence:  gi|256394181|ref|YP_003115745.1|
Domain Number - Region: 629-750
Classification Level Classification E-value
Superfamily Fucose-specific lectin 0.000235
Family Fucose-specific lectin 0.041
Further Details:      
 
Domain Number - Region: 394-611
Classification Level Classification E-value
Superfamily Fucose-specific lectin 0.0144
Family Fucose-specific lectin 0.031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|256394181|ref|YP_003115745.1|
Sequence length 769
Comment hypothetical protein Caci_5044 [Catenulispora acidiphila DSM 44928]
Sequence
MIRRHQRTATLVALGAAFFASAIGSASAMAATPHAAAPQAATQSVSYLGHQFTVPASWPV
IDLAKAPTTCVRFDEHAVYLGQPGAQQDCPSKVFGRTETLLIQPAAASTAAAMTTDNSAT
RELDTTGDGFKVSATYNTDRALAQSILTSAALPAPSATAHIPTPGTVTAPTSTAPTSKAG
QASTSTQSAHSLATAAVAASSTNFTGQGFDACAAPSSSAMSAWKSSSPYSAVGIYIGGAN
RGCAQPNLTSTWVSDEAAAGWRFLPIYVGLQGPGNGCGCAAINSASEGTAAADDAINDAV
SLGFPAGTEITYDMEAYTTGGSYSSLVVGFEAAWSAELHAHGYLSGVYGSMGSTVSDLIN
NYSSTTMPDVLDFASIPGSGSSTVSDPGIPSADWANHQRIHQYTQGHDETWGGVDIPIDA
DYFDVQVSSSAPPPSAPHSSASGLAVASNGGFNTAWKGTDGYQWVANGSGAGISAKGNPF
LLGVAANTTPSMATLSDGSWISAWQGSDGYLWLATGSGANISAKGNPFLLGVAAGTSPSI
VALPNGGWEIAWKGQDGYLWLATGSGINISAKGNPFLLGVSGTTSPSLAALPNGGFEAAW
KGGDGYLWLASGSGITITAKGNPFLLGVVNNPALVTMPDGSFEAAWKGGDGYLWLASGSG
ATITAKGNPFLLGVSGDTSPSIAALPSGGFETAWKGNDGYLWLATGNGANITAKGNPFLL
GVANNPELVTKSDGSFEAAWKGGDGYLWLASGSGINISAKGNPFLLGVA
Download sequence
Identical sequences C7Q4V6
gi|256394181|ref|YP_003115745.1| 479433.Caci_5044 WP_015793633.1.73754

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]