SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for jgi|Cocca1|32352|fgenesh1_pm.4_#_120 from Cochliobolus carbonum 26-R-13 v1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  jgi|Cocca1|32352|fgenesh1_pm.4_#_120
Domain Number 1 Region: 2-76
Classification Level Classification E-value
Superfamily Ubiquitin-like 4.91e-21
Family UBX domain 0.0052
Further Details:      
 
Domain Number 2 Region: 377-471
Classification Level Classification E-value
Superfamily Ubiquitin-like 0.00000000145
Family UBX domain 0.032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) jgi|Cocca1|32352|fgenesh1_pm.4_#_120
Sequence length 548
Sequence
MSHVVVFNSYARSFKIPTTPTKYLTEVRDEACQKFGVNKDQFTLKYNNKPISLSQQIRLA
NLPQGARLELVQASRSPTVISVALQLPATEKNVRLTNKFASNTSLWEILRHFESSPGANY
NFTQRGIPEMSGASGAGRLHYEQPVITVMPGHKEQSSFVELQQTLSQLGFDSGSALLKLS
YRNSGTPLEEAMAQISQYFKPSEPSAGAEGAHASTTSQLASIPDPTQAAPEAAETIAGET
VRKDEPDPEPMEVEPKTAAQPAQEQEVSTDKYAAENIENTSPAAALAAATSTASAAPAQP
SQSSSQPAQDTSQPAEKTRNVQIFSAPTSSTPQAARNTFNESDYLPTIEHAKAHQNALLN
KTKNTRLLSDKELEEKEKERQAKIAAAAEKGGSLRIRMPDGALIQMSFNKNDTAAGLYDF
VRDFLEKKNEPFQLKNTGPTGRLVLIPRDDKRLVQDLRFFNNELVTFQWAENASAETRAS
RHVLASEWQAKAQTLKVEEPAREDPVQSQSSQPQGGSVTEGKRKANMSNEEKESKLKNLL
GKGLFKKK
Download sequence
Identical sequences W6YMJ0
XP_007707054.1.9443 jgi|Cocca1|32352|fgenesh1_pm.4_#_120

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]