SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for jgi|Cocca1|86329|e_gw1.17.177.1 from Cochliobolus carbonum 26-R-13 v1.0

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  jgi|Cocca1|86329|e_gw1.17.177.1
Domain Number - Region: 1-52
Classification Level Classification E-value
Superfamily Ubiquitin-like 0.00355
Family Ubiquitin-related 0.014
Further Details:      
 
Domain Number - Region: 867-920
Classification Level Classification E-value
Superfamily XseB-like 0.0314
Family XseB-like 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) jgi|Cocca1|86329|e_gw1.17.177.1
Sequence length 1347
Sequence
MSLQIAVAHTGQRLDADPVAFTSVDALKYWISRTTEIPPEQQVLLTTQGKHKEIFVFSRE
ISNNPQAAISSTPLPDPFTPDDAPNHLASNTDLGAWQALFQARRNWAFALLEKSHSMSRI
ASKHFAEQATIERATQVAVGNHDAHIKGLEQKYKAAKEWYDGVEKEAGDNVRRLDRDFTQ
LGTVSAILNFKRFLAKEMRSAKNVPSNVIVRETLQDFLDVEAVKMATATSQRVREAFGKR
MDKMNMQLERIAADYNDLLKAVGQSQSRSVVDDTEEPVRLYNEIDAVAKKVESDLEHVMG
LEASSKSVAQVSKMALLHTRNFLPAIQEYSVEMSDLVRRAVEQKNAAIRNSVESMQGIAN
IESFIASMGADLEQISIPQEGVAAFELISLVGRLPYVYGTLLVEAVRRREWMERMERDTS
SLAEEMATFQEEEERRRKRWLKPIADVVNLEAVQGGTLGFEMNVQPEKTVWPTVTREELR
DYLKDLQRLDGQQSEAEAFAQAIKDLDRPTKQQIKRAKNFKMGSVHEPAFGRGSHLMMRG
DDELRVLKEGNAKLEEELRGYKSRVRRLEDLVHRQNTVSRLSIGGAPPSFSIPDAAEPST
PTARVASPRPMEENSRRSSISSRRLSTNTGQEDKRRILRLEQELAAEKEARAKLENEAQS
RRDEDADQQRRFEEAMSTTNNIMENMRAQQKEFAEERKSLEDEIRVYKARIEEAEDELDR
ILGSRDNERIGIDTRVQELAAELEQTRKEATEQKTRTDKETEALQAEIIKLKATRAQERD
SLATVFNHLSPGTSVPDDHSALIAQLEDVAVRSLNYQKELQQAVAVAKSDNENAHARIEE
QENNFNTKVAEHEKAIALVREDLDAEKAKAASITAQLEEEKSHLHDLRSKFAEGETGSEA
LRKRVEEEEAKVGRLQTELAEKNSHANSLDVELMRAEKRLRKLEEVDSSRTHQRMTRAKD
LSQRLYTQHERLIRLLEALGFVITHENGEMVLQRASKLGNSTVMADTSAGISRSTTAPSP
TPLKRFLEDIGDLHFLQWTEAMSPEEEDQRYQELISKLDLFNIETFSDAVAKRMRDMEHT
ARKWQKEARAYRDKAHRFQADSHDKIAYRSFKEGDLALFLPTRNNAHRPWAAFNVGAPHY
FLREQDTHRLGGKEWLVARISKVEERVVDLSKTLDGPPRASLDDRSVASSNAVSFEDDNP
FELSDGLRWYLLEATEEKAMAPGTPGIKGAVTVKSSLETGQGEMQKSKKKSLMDPATQLG
KSLDSRRSSGTSKKSAPLAGRNNSAEALSPGERANSTPNSATATRGGSPAGTHGPSHLRE
TETNGAEPDKTAYDGNGTNVRDLLWGP
Download sequence
Identical sequences W6YHR0
jgi|Cocca1|86329|e_gw1.17.177.1 XP_007708569.1.9443

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]