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Domain assignment for gi|145221431|ref|YP_001132109.1| from Mycobacterium gilvum PYR-GCK

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|145221431|ref|YP_001132109.1|
Domain Number 1 Region: 182-365
Classification Level Classification E-value
Superfamily Zn-dependent exopeptidases 4.08e-36
Family N-acetylmuramoyl-L-alanine amidase-like 0.00063
Further Details:      
 
Domain Number 2 Region: 93-153
Classification Level Classification E-value
Superfamily PGBD-like 1.83e-17
Family Peptidoglycan binding domain, PGBD 0.006
Further Details:      
 
Domain Number 3 Region: 3-75
Classification Level Classification E-value
Superfamily PGBD-like 0.000000000000549
Family Peptidoglycan binding domain, PGBD 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|145221431|ref|YP_001132109.1|
Sequence length 395
Comment peptidoglycan binding domain-containing protein [Mycobacterium gilvum PYR-GCK]
Sequence
MSSLRRGDRGGAVAEIRAALAALGMATDPDEDLSTGKHVAADLFDDELDHAVRAFQQHRG
LLVDGIVGEATYRALKEASYRLGARTLNHQFGAPMYGDDVATLQARLQDLGFYTGLVDGH
FGLQTHNALSSYQREYGLYPDGICGPETLRSLYFLGARVTGGSPHAIREEELVRSSGPRL
SGKRIIVDPGRGGSDHGVIVNGPDGPISEADILWDLASRLEGRMTAIGIETFLSRSANSS
PTDAERAATANTVGADMMISLRCATQDSPAPNGVASFHFGNSHGSVSTIGRNLADFIQRE
VVARTGLRDCRVHGRTWDLLRLTRMPTVQVDVGYISNPGDRATLVSPESRDALAEGILAA
VKRLYLLGKNDRPTGTFTFAELLAHELSVEQARRG
Download sequence
Identical sequences A4T4S3 E6TBU6
gi|145221431|ref|YP_001132109.1| gi|315446817|ref|YP_004079696.1| 350054.Mflv_0837 WP_011891741.1.11461 WP_011891741.1.22401

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