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Domain assignment for gi|113474457|ref|YP_720518.1| from Trichodesmium erythraeum IMS101

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|113474457|ref|YP_720518.1|
Domain Number 1 Region: 213-538
Classification Level Classification E-value
Superfamily Integrin alpha N-terminal domain 3.31e-68
Family Integrin alpha N-terminal domain 0.0061
Further Details:      
 
Domain Number 2 Region: 546-655
Classification Level Classification E-value
Superfamily CalX-like 1.57e-29
Family CalX-beta domain 0.00098
Further Details:      
 
Domain Number 3 Region: 653-768
Classification Level Classification E-value
Superfamily CalX-like 1.7e-27
Family CalX-beta domain 0.0012
Further Details:      
 
Domain Number 4 Region: 769-881
Classification Level Classification E-value
Superfamily CalX-like 2.22e-27
Family CalX-beta domain 0.0011
Further Details:      
 
Domain Number 5 Region: 888-1000
Classification Level Classification E-value
Superfamily CalX-like 6.8e-27
Family CalX-beta domain 0.00089
Further Details:      
 
Domain Number 6 Region: 1018-1114
Classification Level Classification E-value
Superfamily Collagen-binding domain 0.000000000000222
Family Collagen-binding domain 0.0013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|113474457|ref|YP_720518.1|
Sequence length 1118
Comment Na-Ca exchanger/integrin-beta4 [Trichodesmium erythraeum IMS101]
Sequence
MTEPFEENNSSEPEFPDDPFPSVHYLPGADSNPEVTDPMIQGAWGEVRDELADFILAPEF
DDYIKTAFGETVDPELAKEQIKDVLTGENLPEVIMLPAADMEPAVGAYDPLTGSIYLADS
LLPDTDGVLVDVLLEELGHFLDSQLSESDSPGDEGELLAALVRGEELTQFQVMMLRGQDD
RVDIWVGGVEVEVEASEKVDFEKARNFKVGDRPWSVAAGDFNGDGIPDLAVANVGSDNVS
VLLGKGDGSFGSATNFPVGDGPASVAAEDLNGDGIPDLAVANIDSDNVSVLSGKGDGSFG
SATNFPVGDGPESVAVGDFNGDGIPDLAVANWLSDNVSVLLGKGDGSFGSATNFPVGDRP
ASVAAEDLNGDGIPDLAVANWLSDNVSVLSGKGDGSFGSATNFPVGDQPLSVAVGDFNGD
GIPDLAVANRSSDNVSVLSGKGDGSFGSATNFPVGDFPSSVAAEDLNGDGIPDLAVANWL
SYNVSVLSGKGDGSFGSATNFPVGDQPLSVAAEDLNGDGIPDLAVANRGDNNVSILINKT
PITIIPNITISDTKVTEGNTNKTAKFTVTLDNPTTTTVKVNYTTANQTAQVNQDYKLTKG
TLTFRPGETNKNITVPILGDNRDEPQEKFRVALSRPQNANIKDGRATGTIVDNDPVPQIS
IGDAKITEGNRGQKNIEFEVKLNNPSGKTVRVNYGTQEGSAKSGKDFRNKRGVLTFQPGQ
TKKIVNIPILGDRVDENNEEFQVKLSRARNGNLSDKTAVGRIIDNDETIPQISIRDAKVT
EGNRGKKQMKFEVELNNPSTKTVRVNYATVDGSAKSGKDFQNKRGVVTFQPGQRKKIVNI
PILGDRVDENNEQFQVKLSGARNGKLSDKTAVGRIIDNDEGVPKDQITPQISIRDAKITE
GNQGEKNMKFEVKLDNSSSEVVKVNYETVDGSAKSGKDYLKKKGVLKFQPGETKKTVNVP
ILGDTVDEKDEKFQVKLSGAKNGKLSDAKAVGIIRDDEKPVPDEFKNAVDIGILELEQIT
KVDDIGFSEGQQRNTVDHYRFEVKKEGSVNIIVDGFFQDLGIKLYDDDGSLLNQSNEEGN
ITKEKIQTILDPGFYYLEVFPVGAGATDYRLIVNIVEF
Download sequence
Identical sequences Q118M9
gi|113474457|ref|YP_720518.1| 203124.Tery_0601 WP_011610439.1.43450

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