SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|113476030|ref|YP_722091.1| from Trichodesmium erythraeum IMS101

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|113476030|ref|YP_722091.1|
Domain Number 1 Region: 100-261
Classification Level Classification E-value
Superfamily TPR-like 0.0000813
Family Tetratricopeptide repeat (TPR) 0.039
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|113476030|ref|YP_722091.1|
Sequence length 550
Comment peptidase M48, Ste24p [Trichodesmium erythraeum IMS101]
Sequence
MKPLLNYITIILSIFAQQNLALAEINFLENKPRNSQSYYLQLNTDNKKLASLNWVNKQNP
IHIDYYRLDSHLVTESIIPNLEKKPKNSQSKKIFSTNSKPQTQEEKLAAADRLYLAGEKA
AAEKLYREVKEPFTGDIELQLDRPQAVYEPTELPITAQVYWRQAQEGLVKNIETQTFISL
QLLVKEYPEFIPAHIQLAENLKADEQTELALEVLHQATGLYPNEPELIKATITALADDKK
WLEASLSAQQFALMNTQNSQFDEFNQLAETYRKKFQSQLKSRLRRNTIANVVTGALGVAI
TGNPFAAINAVQTTAMMLQGESRIGKTIANYAQKNLPIVEDEEIIKYVNNMGKKLADMTG
RNEFEYNFYIVNDENLNAFALPGGQIFLNLGAIFKTKSEAELAGLLAHELAHTVLSHGFK
LMSEGNLINSVVQYVPYAGATVSNLIVLNYSRKMERQADVLGTRILVSAGYAADGVRNLM
VTLNEGKEDMGVLAWLSTHPETAERVRYLEELIVNNGYNRYAYEGVVSHAKMRTKAKALL
VEKKKDFSKI
Download sequence
Identical sequences Q112F6
gi|113476030|ref|YP_722091.1| WP_011611985.1.43450 203124.Tery_2400

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]