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Domain assignment for gi|113476281|ref|YP_722342.1| from Trichodesmium erythraeum IMS101

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|113476281|ref|YP_722342.1|
Domain Number 1 Region: 13-424
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.16e-133
Family Tandem AAA-ATPase domain 0.000000000143
Further Details:      
 
Domain Number 2 Region: 47-92,468-584
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 3.51e-33
Family Tandem AAA-ATPase domain 0.00000298
Further Details:      
 
Domain Number 3 Region: 624-673
Classification Level Classification E-value
Superfamily C-terminal UvrC-binding domain of UvrB 0.000000000000418
Family C-terminal UvrC-binding domain of UvrB 0.0026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|113476281|ref|YP_722342.1|
Sequence length 677
Comment excinuclease ABC subunit B [Trichodesmium erythraeum IMS101]
Sequence
MKNGTINFKIIMKKFCLQAPFQPTGDQPQAIAQLTTNIQAGHNFQTLLGATGTGKTFSIA
SVIENVGRPTLVLAHNKTLAAQLCNELRDFFPDNSVEYFISYYDYYQPEAYIPVTDTYIE
KTASINDEIDMLRHSATRSLFERRDVIVVASISCIYGLGIPSEYLKAAISLQVGEEINQR
QILRDLATVQYTRNDLNLGRGKFRVKGDVLEIGPAYEDRIIRVEFFGDEIDAIRYIDPVT
GNILQSLESLNVYPARHFVTPEERLEIACNDIEVELDERLKELEKAGKLLEAQRLEQRSR
YDIEMLREVGYCNGVENYSRHLVGRKAGEPPECLIDYFPKDWLLVIDESHVTVPQIRGMY
NGDQARKKVLVEHGFRLPSATDNRPLKSEEFWEKVNQCILVSATPGNWEIEKSEDRIVEQ
IIRPTGVVDPKIFVRPTEGQIDDLLGEIRERVKLEERVLITTLTKRMAEDLTEYLEDQSV
KVRYLHSEINSIKRIEILQGLREGEFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRA
ERSLIQTIGRAARHIRGQAILYADNLTDSMIKAIDETERRRGIQLAYNKMNNITPRPVVK
KQSNAILAFLDVSRRLNSQQLEEVYEQVDNLSLDDVPEWIKKLESQMKEAAKNLEFEEAA
KLRDRIKHLRDKLVGNS
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Identical sequences Q111F5
203124.Tery_2678 gi|113476281|ref|YP_722342.1|

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