SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|113477401|ref|YP_723462.1| from Trichodesmium erythraeum IMS101

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|113477401|ref|YP_723462.1|
Domain Number 1 Region: 604-917
Classification Level Classification E-value
Superfamily Integrin alpha N-terminal domain 1.31e-39
Family Integrin alpha N-terminal domain 0.0066
Further Details:      
 
Domain Number 2 Region: 179-475
Classification Level Classification E-value
Superfamily NHL repeat 0.00000000654
Family NHL repeat 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|113477401|ref|YP_723462.1|
Sequence length 940
Comment hypothetical protein Tery_3964 [Trichodesmium erythraeum IMS101]
Sequence
MKLNTKSIVIIDASVENYQQLLKGVVTGVKPFLLGGDTDGIQQIGDILQKNPETDTLHII
SHGSPGCLYLGNSQLSLDTLKGYESQLQQWQLDNLLLYGCNVAAGDGGEEFIDKLHRLTG
AEIAASKSLTGAAVKGGNWELEVRTGKSKLSLALQVETMASYSDTLNLQFEWAKQIGASS
SGDVSSITTDSNGNVLVGGLFQGNIDIDGDGNNDLTSNNDWDIYAAKLDSNGNLVWAKQI
GGSIDDYVNSITTDSSGNVLVGGSFRSNIDIDGDGNNDFTSNGFGDGGDGYVAKFDSNGN
LVWAKQIGGSYWDNANSIATDSSGNVLVGGSFESYIDIDGDGSIDLIPDGFGDGYVAKFD
SNGNLVWAKQIGGSNWDSPYSITTDSSGNVYSITTDSSGNVLVGGSFRSNIDIDGDWNND
LTSNGDLDGYVAKFDSNGNLVWAKQLGGSNWDNVNSITTDSSGNVLVGGYFDGNIDIDDD
GNNDFTSNGFTDGYVAKFDSNGNLVWAKQIGGSSDDYANSIATDSSGNVFVGGIFSANID
IDGDRNNDLTSNGFTDGYVAKFDSNGNLVWAKQIGGSSLDYANSITTDSSDNVFVGGSFY
GNIDIDGDGNNDFTSNGFGDGFVIKLSEQTSSPQTSPPPTDTEPTRFDFNADGVADIFWR
HPNGANRIWLMNDEGTRDSTVDPGKFGKAWDVAGVADFNTDGVADIFWRHPNGANRIWLM
NDEGTRDSTVNPGKFGKAWDVAGVADFNTDGVADIFWHHPNGANRIWLMNDEGTRDSTVN
PGKFGKAWDVAGVADFNTDGVADIFWHHPNGANRIWLMNDEGTRDSTVSPGKFGKAWDVA
GVADFNTDGVADIFWRHPNGANRIWLMNDEGTRDSRLNPGSFRSAWDVAGVADFNTDGVA
DIFWHHPNGANRIWLMNDEGTKDSGLNPARFSSTWDVVGM
Download sequence
Identical sequences Q10XN5
gi|113477401|ref|YP_723462.1| WP_011613319.1.43450 203124.Tery_3964

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]