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Domain assignment for gi|113477459|ref|YP_723520.1| from Trichodesmium erythraeum IMS101

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|113477459|ref|YP_723520.1|
Domain Number 1 Region: 161-371
Classification Level Classification E-value
Superfamily MurD-like peptide ligases, catalytic domain 1.95e-61
Family MurCDEF 0.0000766
Further Details:      
 
Domain Number 2 Region: 373-542
Classification Level Classification E-value
Superfamily MurD-like peptide ligases, peptide-binding domain 1.13e-32
Family MurCDEF C-terminal domain 0.00064
Further Details:      
 
Domain Number 3 Region: 27-84,134-163
Classification Level Classification E-value
Superfamily MurCD N-terminal domain 1.7e-17
Family MurCD N-terminal domain 0.0016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|113477459|ref|YP_723520.1|
Sequence length 556
Comment UDP-N-acetylmuramate--L-alanine ligase [Trichodesmium erythraeum IMS101]
Sequence
MISRVKGVVCVDFKEQLMSKYVDLTGKPFHFIGIGGIGMSALAYILAKRKLPTYGSDIKS
SHITRRLEAIGAHIFWHQEAKNLELFQQTTEEQNLFLSNNSSLNLSQFTPCISLGEVTTK
KHNVKLENHKGISQLPQVVCSTAINTTNSEYKAAVELGCPIFHRSDLLAALIQDYQSIAV
AGTHGKTTTSSLIGFMLLEAGLDPTIVIGGEVDAWGGNARLGRSPYLVAEADESDGSLVK
LSAHIGVVTNIELDHPDHYDSLDQVVEIFQVFKENCQNLVGCIDCSTVREKLQPTISYSI
NFESDAHYKVDCVHYQSNVTLARVWEKGQILGQLKLRLLGKHNLSNALAAVAVGRLLGLE
FSTITSAIALFEGAHRRFEYRGECNGIVFVDDYAHHPSEINATLAAANLQKNQELSPKPH
ISTKKLTLKTQNNSLKIERVVAIFQPHRYSRTQAFISEFAQSFNDADMVIVTNIYSAGES
SEGQINSQQVAEAISRYHRQVYYRSSLDSVSKFLYQVLKPGDLAIFLSAGNLNQIIPELM
ARYQQPHYQVKSCEIA
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Identical sequences gi|113477459|ref|YP_723520.1| 203124.Tery_4029

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