SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|116326571|ref|YP_796492.1| from Lactococcus lactis subsp. cremoris SK11

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|116326571|ref|YP_796492.1|
Domain Number 1 Region: 1-210
Classification Level Classification E-value
Superfamily CAC2185-like 2.35e-75
Family CAC2185-like 0.00018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|116326571|ref|YP_796492.1|
Sequence length 211
Comment exopolysaccharide biosynthesis protein [Lactococcus lactis subsp. cremoris SK11]
Sequence
MVLDKIRKISRNIKDNKDRKTLGNKNFTIFASNCIGGVIYHNLGHKFLSPTINLWIKPND
YIKMLENPHKYFVSDKMIEVKNSGLPYPVGSINGVKIYGQHYDSFKQLKDKWDQRSKRIN
WDNIYVFFIERDGAPKSNLLDFDKLPYNKVVFTKKNYSDVKSSLVIPKSYDNEHNEVNNL
CDNLNRFTGLKYIDKFDYVNFFNNNEIKLNK
Download sequence
Identical sequences A0A1V0P5K0 Q02VG1 Q2VHL8 T0TGE1 T0UYZ7 T0V081
gi|116326571|ref|YP_796492.1| WP_011669064.1.101083 WP_011669064.1.14741 WP_011669064.1.19814 WP_011669064.1.38018 WP_011669064.1.38190 WP_011669064.1.48880 WP_011669064.1.63588 WP_011669064.1.6822 WP_011669064.1.81028 WP_011669064.1.86027 WP_011669064.1.97943 gi|116326571|ref|YP_796492.1|NC_008505 gi|386644915|ref|YP_005877558.1|NC_017500 272622.LACR_C24

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]