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Domain assignment for gi|125974416|ref|YP_001038326.1| from Clostridium thermocellum ATCC 27405

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|125974416|ref|YP_001038326.1|
Domain Number 1 Region: 261-412
Classification Level Classification E-value
Superfamily TPR-like 0.000000000000469
Family Tetratricopeptide repeat (TPR) 0.016
Further Details:      
 
Domain Number 2 Region: 76-159
Classification Level Classification E-value
Superfamily Integrin alpha N-terminal domain 0.00000122
Family Integrin alpha N-terminal domain 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|125974416|ref|YP_001038326.1|
Sequence length 426
Comment TPR repeat-containing protein [Clostridium thermocellum ATCC 27405]
Sequence
MGEIRNYIKLILIGVAILVTVTMIISATGCDILPPPASAIKPPQYINASSGEVEDPKAIA
RRFLTPGTYFSYPTHPRNADAVWEVDIDGDGRAELLTLYRGRDLKNNGVEVFGVFILKQD
ENHEWQIFWEQQYTANIVALDWADVRDITGDNYPELLIGWNIGYRIGSNLDIYSLKEEDK
PRLISSIKYSEIVGIEDRRGINNEIKPVLMMYLFDEEMYESENEGRKDEYFHILQWDYKE
WMGGGLVEADDFYASYYVNVIEDLKESLERYSNNYYQWYILALAQLRSGKPMDALESVGK
VLEITQRYINRHGERTVKEVFKYQKKARILKAAAYIKMGKYHESIIESNYVLGNYDIDDK
ELAQIYLNLGYAYAGLKQYEMAGTYFNKSCETAETVYKEGTALYLLNSYKAKKQLEYIKP
FLTSSH
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Identical sequences A3DGQ4
CmR22 WP_003513874.1.16390 WP_003513874.1.19387 WP_003513874.1.20586 WP_003513874.1.31213 WP_003513874.1.55520 WP_003513874.1.60145 WP_003513874.1.6636 WP_003513874.1.6965 203119.Cthe_1914 gi|385779875|ref|YP_005689040.1| gi|125974416|ref|YP_001038326.1|

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