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Domain assignment for gi|125974939|ref|YP_001038849.1| from Clostridium thermocellum ATCC 27405

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|125974939|ref|YP_001038849.1|
Domain Number 1 Region: 676-855
Classification Level Classification E-value
Superfamily Fibronectin type III 3.11e-24
Family Fibronectin type III 0.0021
Further Details:      
 
Domain Number 2 Region: 393-558
Classification Level Classification E-value
Superfamily Fibronectin type III 1.87e-20
Family Fibronectin type III 0.0025
Further Details:      
 
Domain Number 3 Region: 43-203
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000128
Family Fibronectin type III 0.0047
Further Details:      
 
Domain Number 4 Region: 214-391
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000215
Family Fibronectin type III 0.0038
Further Details:      
 
Domain Number 5 Region: 585-668
Classification Level Classification E-value
Superfamily Fibronectin type III 0.000000107
Family Fibronectin type III 0.0077
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|125974939|ref|YP_001038849.1|
Sequence length 1042
Comment fibronectin, type III [Clostridium thermocellum ATCC 27405]
Sequence
MKLIIDYFKKLTVFILIILITTFCLRNTALADFTLHAAPADFNSDTQINLNWTSVTNAVY
YSIVRNDVHIANIDIDLVRNYLSFQDTGLVPQTSYSYTVTAVDSNGRSIKSASSTVSTLQ
MKAPSIVSSCLDINTNEITLTWTNNSLAVNGTIVNKSGEGQIAEVSGKNTSVTFVDPNLT
YGVEAQYTIMSIDGNGHSSPSSDPVSIIPIVPPVIEASIKNSTVTISWQPHDHIHEFRLE
RAKYLEDKKKWGSWEIIKTSLAKNSTSTTDSISSDGTYRYRLSIDNGKYKGYSNISNPVA
RLLAPTNIQCVPVDSGRIDISWSLPSKGNFTLKIEKRIDSGSYYTLAVLDSNITSYSDTE
GILPNKYYYYRITAYDENGNSASSPVYSIYTGKPSAASNLMLEITSPTKITLNWKDSSSN
ESGFRIERKVDTGTFVPIATLPANTTSYVDNNVNPQSTYTYRVMSFNSIGDASSYSNEVS
CTTSILKGPPSSLTVTPLSANEIELGWTYAGSASYSTIIERKTGDGSTWEMVTTLPAGYT
SYRDTDLLPNTRYFYRVRTNLASRVYSRPYPEKADDTGVYTYFETPEKLTSAWTVSGFVK
LSWKYEPWDDEEIIIERKTGNGKFIEIGRQDADKTVWYDYDTDPETDYTYRIKAVNAYNS
SEYSNESSVDAISFKPPENLSATIVSNTEIILSWTDMTEDESGFRVEMKEGNSENWKKVV
SLSKNTTSYTIKELKPDTLYHFRVVAEKSAYRFEVYSEEIQVLMKSLAAPSNLVVRAVSP
NQIVLEWKDNSDDEEGFVIERKSNNGDFTEIAKVAKNITKFTDNQLYANTTYYYRVKGYY
KNTYTNYTNIGMAKTALSKTFNDLNSVPWAKEAIESLAARGIIHGKSEEQGIFAPNDRIT
RAEFITLIVNAFQLSKTPTGTFADVKPNHWYYRNVMIAKNMGIVSGTGNNYFYPDDPIKR
EDMAVILAKTFKIIGKPLPNHSDSVLDKYSDKNLISIYALQSMAILNGEGIITGKSSSQL
SPKDYATRAEAAVILYKALNKL
Download sequence
Identical sequences A3DI77
203119.Cthe_2454 Cth-1031 gi|125974939|ref|YP_001038849.1| gi|385777468|ref|YP_005686633.1| WP_003513162.1.16390 WP_003513162.1.19387 WP_003513162.1.20586 WP_003513162.1.31213 WP_003513162.1.55520 WP_003513162.1.60145 WP_003513162.1.6636 WP_003513162.1.6965

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