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Domain assignment for gi|125975293|ref|YP_001039203.1| from Clostridium thermocellum ATCC 27405

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|125975293|ref|YP_001039203.1|
Domain Number 1 Region: 178-501
Classification Level Classification E-value
Superfamily (Trans)glycosidases 1.24e-68
Family beta-glycanases 0.00012
Further Details:      
 
Domain Number 2 Region: 520-590
Classification Level Classification E-value
Superfamily Type I dockerin domain 4.12e-21
Family Type I dockerin domain 0.00029
Further Details:      
 
Domain Number 3 Region: 62-164
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 0.0000128
Family Family 6 carbohydrate binding module, CBM6 0.068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|125975293|ref|YP_001039203.1|
Sequence length 591
Comment glycoside hydrolase family protein [Clostridium thermocellum ATCC 27405]
Sequence
MENKTSIKVFLALMLAVLMPVVSCINVSNAVLSDGDKYEFEDGIHKGAQIYTDYVGQNEY
GEVFDLTGSTCSFIAQKGTSTSVNVEVDKEGLYEIFICYVQPYDKNKKVQYLNVNGVNQG
EISFPFTLKWREISAGIVKLNAGINNIELESYWGYTYFDYLIVKPADESIVELKVPKKLV
NPNATKEAKALMSYLVDIYGKHILSGQQEICGSHNYPGSEAEFTYIQEKTGKLPAIRGFD
FMNYRGNGLMWDDQCAERVIEWYKEKGGIPTVCWHWFSPGDIGKKADNSFYTESTTFSIS
RALTPGTEENIALLNDIDTMARKLKQVQDAGVPVLFRPLHEAEGGWFWWGAEGPEPCVRL
YRLLYDKFTNEYGLNNLIWVWTSYDYETSAAWYPGDDVVDIIGYDKYNAKDGKPNGSAIS
STFYNLVKLTNGKKLVAMTENDTIPRVSNLVNEKAGWLYFCPWYGWWLTSEQNNPVDWLV
EMYQSDYCITLDELPDLKNYPISDYEDSNPDPSPTPTQPPKITYGDLNGDGKVNSTDLTI
MKRYILKNFDKLAVPEEAADLNGDGRINSTDLSILHRYLLRIITSFPVEQQ
Download sequence
Identical sequences A3DJ81
Cth-2304 gi|385777775|ref|YP_005686940.1| WP_003514483.1.16390 WP_003514483.1.19387 WP_003514483.1.20586 WP_003514483.1.31213 WP_003514483.1.55520 WP_003514483.1.60145 WP_003514483.1.6636 WP_003514483.1.6965 gi|125975293|ref|YP_001039203.1| 203119.Cthe_2811

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