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Domain assignment for gi|125975491|ref|YP_001039401.1| from Clostridium thermocellum ATCC 27405

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|125975491|ref|YP_001039401.1|
Domain Number 1 Region: 45-328
Classification Level Classification E-value
Superfamily (Trans)glycosidases 2.55e-51
Family beta-glycanases 0.000000304
Further Details:      
 
Domain Number 2 Region: 430-555
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 3.23e-31
Family Family 6 carbohydrate binding module, CBM6 0.0000373
Further Details:      
 
Domain Number 3 Region: 324-420
Classification Level Classification E-value
Superfamily Glycosyl hydrolase domain 2.37e-26
Family Composite domain of glycosyl hydrolase families 5, 30, 39 and 51 0.0021
Further Details:      
 
Domain Number 4 Region: 561-629
Classification Level Classification E-value
Superfamily Type I dockerin domain 4.41e-21
Family Type I dockerin domain 0.00035
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|125975491|ref|YP_001039401.1|
Sequence length 630
Comment carbohydrate-binding family 6 protein [Clostridium thermocellum ATCC 27405]
Sequence
MRKLRKLLLFSTVLFVVFTQLFGFIITVDAAETATINLSAEKQVIRGFGGMNHPVWISDL
TPQQRDTAFGNGEGQLGFTILRIHVDENRNNWSKEVATARRAIELGAIVFASPWNPPSNM
VETFTRNGVPNQKRLRYDKYGDYVQHLNDFVAYMKSNGVDLYAISVQNEPDYAHEWTWWT
PQEMLRFMRDYAGQINCRVMAPESFQYLKNMSDPILNDPQALANLDILGAHFYGTTVNNM
PYPLFEQKGAGKELWMTEVYVPNSDSNSADRWPEALEVAHNMHNALVEGNFQAYVWWYIR
RSYGPMKEDGTISKRGYMMAHYSKFVRPGYVRVDATKNPTYNVYLSAYKNKKDNSVVAVV
INKSTEAKTINISVPGTSIRKWERYVTTGSKNLRKESDINASGTTFQVTLEPQSVTTFVG
GGSSEPQIPVERNAFSKIECEEYNATNSSTVQVVGTGTGSGLGYIENGNYFAYKNINFGN
GANSFKIRAATTGTPKIEIRLGSPTGTLAGTLQVAATGGFNAYEEQSCSINKITGVQDVY
LVFGGAVNVDWFTFESKQEPTFKYGDLNGDGNVNSTDSTLMSRYLLGIITTLPAGEKAAD
LNGDGKVNSTDYNILKRYLLKYIDKFPVES
Download sequence
Identical sequences A3DJS9
gi|125975491|ref|YP_001039401.1| WP_003514882.1.19387 WP_003514882.1.20586 WP_003514882.1.31213 WP_003514882.1.55520 WP_003514882.1.60145 WP_003514882.1.6636 WP_003514882.1.6965 CmR10 203119.Cthe_3012 gi|385777931|ref|YP_005687096.1|

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