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Domain assignment for gi|125975430|ref|YP_001039340.1| from Clostridium thermocellum ATCC 27405

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|125975430|ref|YP_001039340.1|
Domain Number 1 Region: 30-330
Classification Level Classification E-value
Superfamily Pectin lyase-like 1.51e-81
Family Pectin methylesterase 0.00000371
Further Details:      
 
Domain Number 2 Region: 500-567
Classification Level Classification E-value
Superfamily Type I dockerin domain 8.04e-18
Family Type I dockerin domain 0.00057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|125975430|ref|YP_001039340.1|
Sequence length 567
Comment pectinesterase [Clostridium thermocellum ATCC 27405]
Sequence
MIKNKKILLLLCINLCLFFLLINRIQLVSSAAVNADIIVAKDGTGNFTTIQAAIDSVPSN
SSKRTVIFVKNGTYKEVVTIRKNNIHLIGESNTKTIITYDNYAGKLKPDGTTYGTSGSAS
FYLYGTDTILENITIENSFDESIDVKDKQAVAAYIRGDRQIIKNCIFIGNQDTLYAHSGR
QYYVNCKIIGDTDFIFGGATAVFENCEIVSTPKGGYVTAASTDLENYGFLFLNCRLTSDA
PKNSTYLGRPWRPNAYVVYKTCYLGAHIKESGWTSMSGNLPENARFFEYKNTGPGAVVNS
SRRQLSYAEAAKFTPQNLLKGTDNWNPVALVSQTSTLTPTQKPTSTPAPTPMDGQLIKSL
TVKDSANSSNWSIQSNLRVGDTVFGDRTYKFVTIPNEFLGSEWIRTACDSKKSTEDLAYF
TAKADITVYVGLDSRVATIPSWLNDWTKTSLTITDDGSPQVTYNLYKKNFSANSVVTLGP
NGASSGAVNYIVIVKQNNQNIVYGDLNGDGLVNSSDYSLLKRYILKQIDLTEEKLKAADL
NRNGSVDSVDYSILKRFLLKTITQLPV
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Identical sequences A3DJL8
203119.Cthe_2949 gi|125975430|ref|YP_001039340.1| WP_020457967.1.31213

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