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Domain assignment for gi|220930936|ref|YP_002507844.1| from Halothermothrix orenii H 168

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|220930936|ref|YP_002507844.1|
Domain Number 1 Region: 62-284
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.95e-52
Family RecA protein-like (ATPase-domain) 0.029
Further Details:      
 
Domain Number 2 Region: 247-261,295-449
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 7.21e-42
Family ATP-dependent protease Lon (La), catalytic domain 0.002
Further Details:      
 
Weak hits

Sequence:  gi|220930936|ref|YP_002507844.1|
Domain Number - Region: 6-30
Classification Level Classification E-value
Superfamily RNA polymerase subunits 0.068
Family RBP12 subunit of RNA polymerase II 0.038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|220930936|ref|YP_002507844.1|
Sequence length 451
Comment DNA repair protein RadA [Halothermothrix orenii H 168]
Sequence
MPRPKTYYICSECGYKSAKWMGRCLNCGAWNTFQELDEEAIEEKVDIKVTPSSITDIKAG
ACPRLSSGIGEFDRVLGGGVVPGSLILLGGAPGIGKSTLVLQMARHFSEKYGKVLYVSGE
ESASQLKMRAGRLGAINEDLYVLSETNFQQIYGVIQNEKYELIIIDSIQTIFDPRIESTP
GSISQVKEVTNRLLIQAKKLEVPIVLIGHVTKEGHLAGPRVLEHLVDTVLQFEGDRNYIY
RILRAVKNRFGSTNEIGVFEMMGSGMREVVNPSEIFLKGRAQGVSGSVIVPVVEGSRPLL
VEVQALVTYSSFGTPQRLTTGVDRKRVSILLAVLEKKAGINFHNQDVNINITGGLKVEEP
ALDLGIITAILSSCKDQEVAPDLAVIGEVGLAGEIRAVSQIERRLSELKKMGFKEVVIPG
GNISGLDFDPDINIVEVKNVNDLMKILFNRR
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Identical sequences B8D095
373903.Hore_00880 WP_012635048.1.20074 gi|220930936|ref|YP_002507844.1|

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