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Domain assignment for gi|110803242|ref|YP_697499.1| from Clostridium perfringens SM101

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|110803242|ref|YP_697499.1|
Domain Number 1 Region: 989-1101
Classification Level Classification E-value
Superfamily Collagen-binding domain 9.94e-29
Family Collagen-binding domain 0.0001
Further Details:      
 
Domain Number 2 Region: 863-975
Classification Level Classification E-value
Superfamily Collagen-binding domain 2.22e-28
Family Collagen-binding domain 0.00018
Further Details:      
 
Domain Number 3 Region: 773-858
Classification Level Classification E-value
Superfamily PKD domain 4.97e-17
Family PKD domain 0.0013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|110803242|ref|YP_697499.1|
Sequence length 1104
Comment collagenase [Clostridium perfringens SM101]
Sequence
MKKNLKRGELTKLKLVERWSATFTLAAFILFNSSFKVFAADKKIENSNNGQITREINADQ
ISKTELNNEVATDNNRPLGPSIAPSRARNNKIYTFDELNRMNYSDLVELIKTISCENVPD
LFNFNDGSYTFFSNRDRVQAIIYGLEDSGRTYTADDDKGIPTLVEFLRAGYYLGFYNKQL
SYLNTPQLKNECLPAMKAIQYNSNFRLGTKAQDGVVEALGRLIGNASADPEVINNCIYVL
SDFKDNIDKYGSNYSKGNAVFNLMKGIDYYTNLVIYNTKGYDAKNTEFYNRIDPYMERLE
SLCTIGDKLNNDNAWFVNNALYYTGRMGKFREDPSISQRALERAMKEYPYLSYQYIEAAN
DLDLNFGGKNSSGNDIDFNKIKADAREKYLPKTYTFDDGKFVVKAGDKVTEEKIKRLYWA
SKEVKAQFMRVVQNDKALEEGNPDDILTVVIYNSPEEYKLNRIINGFSTDNGGIYIENIG
TFFTYERTPEESIYTLEELFRHEFTHYLQGRYVVPGMWGQGEFYQEGVLTWYEEGTAEFF
AGSTRTDGIKPRKSVTQGLAYDRNNRMSLYDVLHAKYGSWDFYNYGFALSNYMYNNNIGM
FNKMTNYIKNNDVSGYKDYIASMSSDYGLNDKYQDYIDSLLNNIDNLDVPSVSDEYVNGH
EAKDINEITKDIKEVSNIKDLSSNVEKSQFFTTYDMRGTYVGGRSQGEENDWKDMNSKLN
DILKELSKKSWNGYKTVTAYFVNHKVDENGNYVYDVVFHGMNTDTNTDVHVNKEPKAVIK
SDSSVIVEEEINFDGTESKDEDGEIKAYEWDFGDGEKSNEAKAAHKYNKTGEYEVKLTVT
DNNGGINTESKKIKVVEDKPVEVINESEPNNDLEKANQITKSNMLVKGTLSQNDYSDKYY
FDVAKKGNVKITLNNLNSVGITWTLYKEGDLNNYVLYATRNDGTELKGEKILEPGRYYLS
VYTYDNQSGAYTVNVKGNLKNEVKEVEKDSIKEVENNNDFDKAMKVDSNSKIVGTLSNDD
LKDIYSIDIQNPSDLNIVVENLDNIKMNWLLYSADDLSNYVYYANADGNKLSNTCKLNPG
KYYLCVYQFENSGTGNYTVNLQNK
Download sequence
Identical sequences Q0SWK1
gi|110803242|ref|YP_697499.1| 289380.CPR_0162

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