SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for EPrPV00000016905 from Pythium vexans DAOM BR484 22

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EPrPV00000016905
Domain Number 1 Region: 400-452,480-512,576-690,720-789
Classification Level Classification E-value
Superfamily Ankyrin repeat 1.13e-47
Family Ankyrin repeat 0.00046
Further Details:      
 
Domain Number 2 Region: 808-925
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 3.53e-17
Family Toll/Interleukin receptor TIR domain 0.0082
Further Details:      
 
Weak hits

Sequence:  EPrPV00000016905
Domain Number - Region: 1023-1131
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 0.000183
Family Toll/Interleukin receptor TIR domain 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) EPrPV00000016905
Sequence length 1275
Comment pep:novel supercontig:GCA_000387545.2:pve_scaffold_172:702:4529:1 gene:maker-pve_contig_172-fgenesh-gene-0.0 transcript:EPrPVT00000016905 description:"Transmembrane protein."
Sequence
MTSAATPCSYHGNESATPFEALPPFSPTIAAASHKNSRRVLQIDTDAPSKTATDRRAPPS
THYFVGLDGRLQKRRCWRLYTRLRRLAGIIVPCFKHDSNTFLCAPLLENTALNALLLLVR
IFAAYAVLTPLLESNSDPTAETAANECKDYTRNLFDISSYTLIGIIVLCLPTIGSPAFRL
YRPRTDKKTSKSGQAVSRLRSADNAAMAAGVDLASEREDVDLLLEKTPLLRVCEFVVVCE
ILYLMATFVMLFTNDSNTYVVGLYESCYLDANLDFGALLVVVIVQVLAVVAYFVRWRQIV
LFHQFHLHLFYQRGALPNRARFDYIEKKLAFLPALFCGHKAALHSRKMHKIKAELYGAAK
IGDVNQARASVADAIALDGPDFAAKWYIPPRRLLLFASCRRNPLHVAVVFDQPEVVRELL
EGPARFDPNTLDQLERIKLGLSWMYRVLFRVAALFNRGDFTTDRTTDEHTRPFGIAGLFH
STLLSPLHTAATLGNADMVLLLLRHGADANLAARSTDARFATPPLFWARTKDCARLLLDA
DANPLFIPGSGFLLTAFEVARLAGNRSVARLMEKFGGDVALTPLHDACARGHDTEVEFLL
KHGANPDALGEQVVGFFNRTPLHWAAMRGQDAAIRLLLQYGASVDARDAFGRSPLAWACL
LGRVSSAKLLLENGADPNTRDVLGDPLLCLCAAGVTRAAVTRTSAKPSNYDDYNEPTDAE
PHQYRSSLDPRVIELLVRHGVDLHATRTSNGDTALHVALRHGNETAALLLVRAGLDITAM
NLLGQRAIECTTSTTLRYAVKKEAGQRDVMISYTHSNSSLARRIRDELEAAHVTTWIDAM
DPTGIAGGTEWRREIANGIQSSALVLAVLTRDYPASPWCMKELAFARQHNVPVVAVQCDD
MVIPEELQVYLWTRQMVDFRPALFIESSKLVGGESEDAQGKAFRDCVRLLLDGIQDQIVE
RRARLADQHDGAGDDVEEMDGDKVGEVKYPQDVDAPALSAATTASLTSFLPSETHSPIDP
TSFVFIAHGDSHASFCHRLRNSLARQGVHSIIDEAALSSSGVNRDRVANDTVLSAQTRQL
AAKDAILASSAVIVVLSPVSTASGQLQDQLAFAEDRGKLVVPLMLSLHSVSLAQRYSLSR
SVVHHFNESLGFTDSAERLATFLRAQADLERQQRRRRSSAATRLDIAPSGSPSTSWSSSI
DVIDTPSQFGHDPVDEIGALSTDPARFRLRRPASDESGHGWRLSSTTESEPSFARMRSLE
SLIDGRREREASSGS
Download sequence
Identical sequences EPrPV00000016905

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]