SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|159037158|ref|YP_001536411.1| from Salinispora arenicola CNS-205

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  gi|159037158|ref|YP_001536411.1|
Domain Number - Region: 72-124
Classification Level Classification E-value
Superfamily Aerolisin/ETX pore-forming domain 0.0706
Family ETX/MTX2 0.058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|159037158|ref|YP_001536411.1|
Sequence length 213
Comment putative cyclase-dehydratase [Salinispora arenicola CNS-205]
Sequence
MSVLSRRLRPLVAVGVGLALAVLHVSPVAAADTDVNFACQARPPIVSPQTFDLAAGVDAV
APASVAAGASFTVELAPTPLTVPSSVNGYTVRQIKDLQLSVPVPANATLTGQQVSGGSGL
GSAPPTVHVANGRVVVTVPGPIDGGNTFTPPMLTLTMTAGAAGTTVETMVAGSSYGDPGL
TFTARVPILFFVADVPTSCYPSPSPVLSTTAVL
Download sequence
Identical sequences A8LUR7
391037.Sare_1524 gi|159037158|ref|YP_001536411.1| WP_012181728.1.102098 WP_012181728.1.10772 WP_012181728.1.18430 WP_012181728.1.20048 WP_012181728.1.24936 WP_012181728.1.2519 WP_012181728.1.25902 WP_012181728.1.26117 WP_012181728.1.29984 WP_012181728.1.30836 WP_012181728.1.32557 WP_012181728.1.33355 WP_012181728.1.35493 WP_012181728.1.51738 WP_012181728.1.58464 WP_012181728.1.69805 WP_012181728.1.7007 WP_012181728.1.76773 WP_012181728.1.79888 WP_012181728.1.806 WP_012181728.1.86246 WP_012181728.1.88482 WP_012181728.1.98445 WP_012181728.1.99814

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]