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Domain assignment for gi|156937004|ref|YP_001434800.1| from Ignicoccus hospitalis KIN4/I

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|156937004|ref|YP_001434800.1|
Domain Number 1 Region: 13-176,205-219
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.16e-54
Family Ribonuclease PH domain 1-like 0.00000426
Further Details:      
 
Domain Number 2 Region: 191-275
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 6.73e-20
Family Ribonuclease PH domain 2-like 0.001
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|156937004|ref|YP_001434800.1|
Sequence length 276
Comment exosome complex RNA-binding protein Rrp42 [Ignicoccus hospitalis KIN4/I]
Sequence
MSITPFNVPIVPKLKRDTILSLAKRGTRIDKRRLDQYRPIKITLGVGGKAHGSALVEIGN
TKVLAGVKVEVGKPFKDVPDAGVLNVNAELLPLASSEFEPGPPDENAIELARVIDRALRE
PGVIDLKELVLIPGEKVLVVWLDVYVLDHDGNLFDASMLASMAALLDTRYPEYVVREDGS
VEVDEANKRPLPIANKVVSVTLNVLENLFMVDPTLEEEVVADGKIVFAFDERGRLVGLQK
SGPAWLDLDKSTTAFNLAYSKYKELLEVLEKSLAER
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Identical sequences A8A8Z1
WP_011998245.1.33635 gi|156937004|ref|YP_001434800.1| 453591.Igni_0209

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