SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|156937259|ref|YP_001435055.1| from Ignicoccus hospitalis KIN4/I

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|156937259|ref|YP_001435055.1|
Domain Number 1 Region: 3-315
Classification Level Classification E-value
Superfamily Nucleotidylyl transferase 4.29e-45
Family Class I aminoacyl-tRNA synthetases (RS), catalytic domain 0.00000113
Further Details:      
 
Domain Number 2 Region: 354-492
Classification Level Classification E-value
Superfamily An anticodon-binding domain of class I aminoacyl-tRNA synthetases 3.53e-18
Family C-terminal domain of class I lysyl-tRNA synthetase 0.0059
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|156937259|ref|YP_001435055.1|
Sequence length 496
Comment lysyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
Sequence
MEWLNKIVDEIIKKRGGRAFVVASGLTTSGPAHLGTLSEFIYPYSIVQELRRRGYDAEFV
FVADIMDAFDDIPQTLKDKEEELKKHLGKPLAEVPDPYGCHESYGEHFLAEFLELMDKFG
IKPDEVLRASELYAQGWYDDYLRLFVEQRDKVKKIMEETAMRKLPDDWWGFVKPICEKCG
RIDKTVVKKVEGDKIYYKCEACGHEGAVEVSSHRWKLAWRLDWPSRQDFLGVDAEGGGVD
HFTKGGSWDTAKRIHKEVFGKEPPVGFRYGFVLMNGKKMSKSKGIGALHEIMALLHPSVI
MYFILKHDIKENKNFKMDPRFLMQLYEEYRRVALGEDEDPKRRRAWELSGGRVWRAGFAD
LLVYYQIYRDWKKVGELTGDPQAVKDLAPYVEEWVKRGFVPEEYEVTVKQGKVSDPKGCE
FLRALAEELREDMDAVEIHNKVYEVAKKVGLSPKDAFKFVYKALLDKERGPRAGRLIKAI
GVRKAKEMFEKACSPT
Download sequence
Identical sequences A8A9P6
gi|156937259|ref|YP_001435055.1| 453591.Igni_0465

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]