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Domain assignment for gi|289192787|ref|YP_003458728.1| from Methanocaldococcus sp. FS406-22

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|289192787|ref|YP_003458728.1|
Domain Number 1 Region: 273-552
Classification Level Classification E-value
Superfamily Methyl-coenzyme M reductase alpha and beta chain C-terminal domain 1.28e-146
Family Methyl-coenzyme M reductase alpha and beta chain C-terminal domain 0.00000000105
Further Details:      
 
Domain Number 2 Region: 4-272
Classification Level Classification E-value
Superfamily Methyl-coenzyme M reductase subunits 2.98e-145
Family Methyl-coenzyme M reductase alpha and beta chain N-terminal domain 0.0000000014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|289192787|ref|YP_003458728.1|
Sequence length 553
Comment methyl-coenzyme M reductase, alpha subunit [Methanocaldococcus sp. FS406-22]
Sequence
MDAEKRLFLKALKEKFEEDPREKYTKFYVFGGWRQSARKREFVEAAQKLIEKRGGIPFYN
PDIGVPLGQRKLMPYKVSNTDVIVERDDLHFMNNAAMQQFWDDIRRTVIVGLDTAHAVLE
KRLGVEVTPETINEYMETINHALPGGAVVQEHMVEVHPALVWDCYAKIFTGDDELADEID
KRFLIDINKLFPEEQAEQIKKAIGKRTYQVSRVPTLVGRVCDGGTIARWSAMQIGMSFIT
AYKLCAGEAAIADFAYAAKHADVIQMASFLPARRARGPNEPGGIFFGVLADIVQTSRVSD
DPVEQSLEVVASGAMLYDQIWLGGYMSGGVGFTQYATATYTDDILDDFSYYGYDYITKKY
GGCNSVKPTMDVVEDIATEVTLYGLEQYDSFPALLEDHFGGSQRAGVTAAAAGITTALAT
GNSNAGLNGWYLSQILHKEYHSRLGFYGYDLQDQCGAANSLSFRNDEGSPLELRGPNYPN
YAMNVGHQGEYAGITQAAHSARGDAFALNPLIKVAFADPSLVFDFTHPRKEFARGALREF
EPAGERDPIIPAH
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Identical sequences D3S578
WP_012980900.1.35598 gi|289192787|ref|YP_003458728.1|

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