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Domain assignment for gi|161527941|ref|YP_001581767.1| from Nitrosopumilus maritimus SCM1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|161527941|ref|YP_001581767.1|
Domain Number 1 Region: 8-172,200-217
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 3.9e-47
Family Ribonuclease PH domain 1-like 0.00000651
Further Details:      
 
Domain Number 2 Region: 187-269
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 3.14e-22
Family Ribonuclease PH domain 2-like 0.00079
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|161527941|ref|YP_001581767.1|
Sequence length 272
Comment exosome complex RNA-binding protein Rrp42 [Nitrosopumilus maritimus SCM1]
Sequence
MTSHTVIDELKRNQILELLEQGKRVDGRALDESREVSIETNAIPKANGSARVRLGDTEVV
CGVKIQPDRPFPDTGDKGLFICTAELLPLSHPTVETGPPGPEVIELARVVDRGIRESHMI
DVSQLVIEKDKSVIGVFADNVVVDYDGNLFDACSYAATAALLSSKSPKWNWVDDAPALVE
GEEVDVPITTIPVSVTMGKIGNHIIVDPNGDEWASMDARITITSDSDGNICALQKGGDDG
FTQDEIVQCGEISVRVGAKIREKLKAAQQGGQ
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Identical sequences A9A5D0
436308.Nmar_0433 gi|161527941|ref|YP_001581767.1|

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