SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for jgi|Triha1|182658|CE12809_11626 from Trichoderma harzianum CBS 226.95 v1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  jgi|Triha1|182658|CE12809_11626
Domain Number 1 Region: 48-119
Classification Level Classification E-value
Superfamily Sm-like ribonucleoproteins 8.56e-20
Family Sm motif of small nuclear ribonucleoproteins, SNRNP 0.0027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) jgi|Triha1|182658|CE12809_11626
Sequence length 132
Sequence
MSDRPSHRGGRGGDRGNYRGRGGGAGGGRGGASAAQGERPKKENILDLAKYMDKEITVKF
NGGREVRGTLKGYDALMNLVLDEVQETLRDEEGNESSRPLGLVVVRGTLLVLISPADGSE
EIANPFAQPEED
Download sequence
Identical sequences jgi|Triha1|182658|CE12809_11626

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]